Information for 15-ATATATAT (Motif 38)

C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.115e+01
Information Content per bp:1.530
Number of Target Sequences with motif890.0
Percentage of Target Sequences with motif81.28%
Number of Background Sequences with motif34427.2
Percentage of Background Sequences with motif75.97%
Average Position of motif in Targets99.2 +/- 56.6bp
Average Position of motif in Background99.9 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)3.46
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----ATATATAT---
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----ATATATAT-----
ANNNGGATATATCCNNN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ATATATAT---
NNTATANATATACN
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ATATATAT--
YATGCATATRCATRT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------ATATATAT
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------ATATATAT
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATATATAT--
ATGMATATDC
 C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATATATAT
GAATATTCAT
 A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATATATAT----
CTCATGAATATTCAT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATATATAT------
GACAGAGATATCAGTGT
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T