Information for 3-HTGGCAGMAN (Motif 4)

G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
Reverse Opposite:
A G C T A G C T A C G T A G T C C G A T C T A G T A G C G T A C C G T A C A T G
p-value:1e-16
log p-value:-3.909e+01
Information Content per bp:1.603
Number of Target Sequences with motif370.0
Percentage of Target Sequences with motif33.79%
Number of Background Sequences with motif10200.8
Percentage of Background Sequences with motif22.51%
Average Position of motif in Targets101.8 +/- 56.1bp
Average Position of motif in Background99.2 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:HTGGCAGMAN
TTGCCAAG--
 G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--HTGGCAGMAN
VGCTGGCA----
 A C G T A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-HTGGCAGMAN
CGTGCCAAG--
 A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:HTGGCAGMAN
ATGCCAGACN
 G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--HTGGCAGMAN
NNTTGGCANN--
 A C G T A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---HTGGCAGMAN
TACTTGGCAGA--
 A C G T A C G T A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-HTGGCAGMAN
RHTGWCAR---
 A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:HTGGCAGMAN
TTGACAGC--
 G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:HTGGCAGMAN
ATGCCAACC-
 G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--HTGGCAGMAN
ARNTGACA----
 A C G T A C G T G T A C C G A T A C T G A T C G G A T C C G T A C T A G T G C A T C G A T C G A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T