Information for 17-CAGATGACTA (Motif 10)

A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
Reverse Opposite:
A C G T C T G A A C T G A C G T A G T C C G T A A C G T A T G C G A C T A C T G
p-value:1e-18
log p-value:-4.289e+01
Information Content per bp:1.870
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif678.3
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets203.8 +/- 151.8bp
Average Position of motif in Background170.6 +/- 115.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAGATGACTA
ACCAGATGGC--
 A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CAGATGACTA
GGAACAGATGGCA-
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGACTA
DMCAGATGKS--
 A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGACTA
AACAGATGGC--
 A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGACTA--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGATGACTA
GGACAGATGGCAG
 A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

TWIST1/MA1123.2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAGATGACTA
ATTCCAGATGTTT-
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T A C G T

USF1/MA0093.3/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CAGATGACTA
NNGTCACATGACNN
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

Ptf1a/MA1618.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGATGACTA
AAACAGATGTTTA
 A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

USF2/MA0526.3/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CAGATGACTA
NNGTCACATGACNN
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G G T C A A C G T C T A G G T C A A G T C G A C T C G T A
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A