Information for 18-TTAAATGCACAA (Motif 16)

A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T C G T A C G T A
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets154.2 +/- 122.1bp
Average Position of motif in Background189.2 +/- 80.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.4/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTAAATGCACAA---
-TTATTGCACAATAT
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTAAATGCACAA
TCCAATCCACA-
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

CEBPD/MA0836.2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTAAATGCACAA---
--TATTGCACAATAT
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTAAATGCACAA-
-SSAATCCACANN
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTAAATGCACAA
TTAAGTGC----
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTAAATGCACAA---
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

FOXE1/MA1487.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTAAATGCACAA-
CCTTAAATAAACAAT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

POU5F1/MA1115.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTAAATGCACAA-
--ATATGCAAATT
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAAATGCACAA---
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTAAATGCACAA-
---ATTGCGCAAC
 A C G T A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C