Information for 21-GGCKGTAATCTA (Motif 18)

A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
Reverse Opposite:
C G A T C T G A C T A G C G T A C G A T A C G T C G T A A T G C G T A C A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.207e+01
Information Content per bp:1.810
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets253.3 +/- 149.5bp
Average Position of motif in Background270.1 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCKGTAATCTA-
--TTCTAATCTAT
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A A C G T
A C G T A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGCKGTAATCTA
----YTAATCCY
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCKGTAATCTA
---GCTAATCC-
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCKGTAATCTA-----
---NNTAATCCNGNCNN
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCKGTAATCTA-
---NYTAATCCYB
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCKGTAATCTA-
---GCTAATCCCC
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX1/MA0682.2/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCKGTAATCTA
----CTAATCCC
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

PITX2/MA1547.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCKGTAATCTA
----ATAATCCC
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
A C G T A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCKGTAATCTA-
---CCTAATCCGC
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A A C G T
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCKGTAATCTA
----TTAATCCG
 A C T G T C A G A G T C A C T G A T C G A C G T C G T A C G T A A C G T A G T C G A C T C G T A
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G