Information for 24-CTAGTGGC (Motif 19)

A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C
Reverse Opposite:
T C A G A G T C A G T C G T C A T A G C A G C T C G T A C T A G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.821
Number of Target Sequences with motif275.0
Percentage of Target Sequences with motif5.50%
Number of Background Sequences with motif1696.8
Percentage of Background Sequences with motif3.82%
Average Position of motif in Targets183.4 +/- 141.0bp
Average Position of motif in Background181.8 +/- 111.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGGC
NTCAAGTGGN
 A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGGC---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CTAGTGGC---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGGC
NTCAAGTGG-
 A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGGC---
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGGC---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTAGTGGC-
TTRAGTGSYK
 A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGGC
ACACGTGGC
 A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAGTGGC
RTCATGTGAC
 A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

MYC/MA0147.3/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTGGC-
NNGCACGTGGNN
 A C G T A C G T A C G T A G T C G C A T C T G A A T C G A C G T A C T G T C A G A G T C A C G T
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C