Information for 7-NWGATNNHNATC (Motif 5)

A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C
Reverse Opposite:
A C T G C G T A G A C T T G A C C G A T G A C T G T C A G T C A C A G T T A G C G C T A T C G A
p-value:1e-121
log p-value:-2.795e+02
Information Content per bp:1.531
Number of Target Sequences with motif605.0
Percentage of Target Sequences with motif12.10%
Number of Background Sequences with motif1802.2
Percentage of Background Sequences with motif4.06%
Average Position of motif in Targets182.2 +/- 108.1bp
Average Position of motif in Background176.9 +/- 120.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NWGATNNHNATC---
NAGATWNBNATCTNN
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:NWGATNNHNATC
-AGATAASR---
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----NWGATNNHNATC-
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-NWGATNNHNATC---
TAAGATTATAATACGG
 A C G T A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:NWGATNNHNATC--
--TATGCWAATBAV
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:NWGATNNHNATC--
--WATGCAAATGAG
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NWGATNNHNATC----
-TAATGATGATCACTA
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T A C G T A C G T A C G T
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

GATA3/MA0037.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NWGATNNHNATC
-AGATAAGA---
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C
A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:NWGATNNHNATC
--TATGCAAAT-
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NWGATNNHNATC-
-TTATGCAAATTA
 A G C T C G A T A T C G G T C A C A G T C A G T C T G A G C T A A C T G C T G A G C A T T G A C A C G T
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A