Information for 1-AAACGCGA (Motif 1)


Reverse Opposite:

p-value:1e-14
log p-value:-3.224e+01
Information Content per bp:1.597
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif58.58%
Number of Background Sequences with motif12763.5
Percentage of Background Sequences with motif29.87%
Average Position of motif in Targets490.7 +/- 307.6bp
Average Position of motif in Background508.5 +/- 394.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAACGCGA--
AAACGCGAAA

MA0330.1_MBP1::SWI6/Jaspar

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AAACGCGA
-AACGCGT

MA0329.1_MBP1/Jaspar

Match Rank:3
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AAACGCGA-
--ACGCGTA

MA0401.1_SWI4/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AAACGCGA--
--ACGCGAAA

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AAACGCGA--
--ACGCGAAA

SWI6(MacIsaac)/Yeast

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAACGCGA
-GACGCG-

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAACGCGA--
-GACGCGAAA

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAACGCGA
-GACGCGT

MBP1(MacIsaac)/Yeast

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AAACGCGA
-GACGCGT

SWI4(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAACGCGA---
--ACGCGAAAA