Information for 11-ACACACAC (Motif 9)


Reverse Opposite:

p-value:1e-1
log p-value:-3.669e+00
Information Content per bp:1.469
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif57.99%
Number of Background Sequences with motif21448.8
Percentage of Background Sequences with motif50.20%
Average Position of motif in Targets474.8 +/- 273.8bp
Average Position of motif in Background509.9 +/- 331.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.82
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
CACACACACA

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----ACACACAC----
AGCGGCACACACGCAA

MA0538.1_DAF-12/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ACACACAC----
NACGCACACACACAC

MA0270.1_AFT2/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ACACACAC-
-CACACCCC

MET31(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACACACAC
GCCACACC-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGCCACACCCAN

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACACACAC
GCAAACAM

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACACACAC-
GGCCACACCCA

MA0472.1_EGR2/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ACACACAC--
CCCCCGCCCACGCAC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACACACAC-
CRCCCACGCA