Information for 20-ATCATCGAAT (Motif 10)

C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T
Reverse Opposite:
C G T A A G C T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
p-value:1e-102
log p-value:-2.361e+02
Information Content per bp:1.973
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets242.5 +/- 226.5bp
Average Position of motif in Background290.5 +/- 127.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)2.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCATCGAAT--
NANTTCATTGAATTA
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PAX7/MA0680.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCATCGAAT-
-TAATCGATTA
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T
A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCATCGAAT-----
AAAACATCGTTTTTAAG
 A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------ATCATCGAAT
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCATCGAAT-----
TTTAATCAAATTATAT
 A C G T C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCATCGAAT----
ATTATCGATTTTTT
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCATCGAAT-
-TTATCGATTA
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T
A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

PAX3/MA0780.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCATCGAAT-
-TAATCGATTA
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T
A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCATCGAAT----
ATGATCGAATCAAA
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCATCGAAT-
-NTATCGATTA
 C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A C T G A A C G T A C G T
A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A