Information for 25-TCCACTCCAC (Motif 12)

A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G A C T G G T C A C T A G A C G T A C T G A C T G C G T A
p-value:1e-25
log p-value:-5.894e+01
Information Content per bp:1.926
Number of Target Sequences with motif974.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif668.4
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets331.9 +/- 332.5bp
Average Position of motif in Background216.9 +/- 126.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TCCACTCCAC--
TAACCACTCAAGAA
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCCACTCCAC
NSCACTYVAV
 A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCCACTCCAC
ATCCAC-----
 A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCCACTCCAC---
-SSAATCCACANN
 A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCACTCCAC-
ACCACTCAAAA
 A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCACTCCAC
AASCACTCAA-
 A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCACTCCAC
AGCCACTCAAG
 A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCACTCCAC
MRSCACTYAA-
 A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCACTCCAC
RSCACTYRAG
 A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCACTCCAC-
TCCAATCCACA
 A C G T A G T C A G T C C G T A A G T C A C G T A G T C G T A C C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A