Information for 12-YTTCCDGGAA (Motif 4)

A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A
Reverse Opposite:
A G C T A C G T A T G C A G T C G C T A C T A G A T C G T G C A C T G A T C A G
p-value:1e-292
log p-value:-6.738e+02
Information Content per bp:1.628
Number of Target Sequences with motif22302.0
Percentage of Target Sequences with motif34.55%
Number of Background Sequences with motif17669.6
Percentage of Background Sequences with motif27.94%
Average Position of motif in Targets255.8 +/- 188.5bp
Average Position of motif in Background220.8 +/- 133.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:YTTCCDGGAA
CTTCCNGGAA
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--YTTCCDGGAA--
NNCTTCCNGGAAGN
 A C G T A C G T A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:YTTCCDGGAA--
TTTCCNGGAAAN
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----YTTCCDGGAA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:YTTCCDGGAA-
TTTCCAGGAAA
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-YTTCCDGGAA---
ATTTCCNGGAAATN
 A C G T A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T A C G T A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.84
Offset:0
Orientation:forward strand
Alignment:YTTCCDGGAA-
CTTCTGGGAAA
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.83
Offset:0
Orientation:forward strand
Alignment:YTTCCDGGAA----
TTTCCAGGAAATGG
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat5a/MA1624.1/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-YTTCCDGGAA-
NNTTCTTGGAAN
 A C G T A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:YTTCCDGGAA--
-TTCTTGGAAAN
 A G T C G A C T A C G T T A G C G A T C C G A T A C T G A T C G T G C A T C G A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T