Information for 7-GTCTGGGATC (Motif 5)

A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
Reverse Opposite:
C A T G T G C A A C G T A T G C G T A C A G T C C G T A A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.856
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.36%
Number of Background Sequences with motif234.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets92.4 +/- 62.2bp
Average Position of motif in Background100.0 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGATC
GGTCTGGCAT-
 A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGGATC
CTGTCTGG----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCTGGGATC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGGATC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGGATC
TWGTCTGV----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGATC
TGTCTAGA---
 A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------GTCTGGGATC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGGGATC-
TGTCTGDCACCT
 A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGGATC-
CTGTCTGTCACCT
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGATC
WDNCTGGGCA-
 A C G T A C T G A C G T A G T C A C G T A C T G C A T G A T C G G T C A A C G T G T A C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T