Information for 9-GCCAGGGDCA (Motif 7)

A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A
Reverse Opposite:
C G A T A C T G G T A C A T G C A G T C G T A C A C G T A C T G A C T G A T G C
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.801
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif10.27%
Number of Background Sequences with motif1272.0
Percentage of Background Sequences with motif2.62%
Average Position of motif in Targets106.0 +/- 57.2bp
Average Position of motif in Background96.4 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCAGGGDCA
BTCAAGGTCA
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCAGGGDCA
NTCAAGGTCA
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCAGGGDCA-
-CCAGGAACAG
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCAGGGDCA-
-CAAAGGTCAG
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGGDCA
CGTGCCAAG----
 A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCAGGGDCA--
--CAAGGHCANV
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCAGGGDCA-
GTCAAGGTCAC
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ESRRA/MA0592.3/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGGDCA--
GCTCAAGGTCACA
 A C G T A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGGGDCA--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCAGGGDCA-
-TCAAGGTCAN
 A T C G A G T C A G T C C G T A A C T G C T A G A T C G C A T G A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C