Information for 11-AGAACAGATT (Motif 9)

G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T
Reverse Opposite:
C G T A C G T A G C A T A G T C C G A T A C T G A G C T A C G T G T A C C A G T
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.789
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif551.6
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets87.0 +/- 63.7bp
Average Position of motif in Background96.5 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGAACAGATT--
AAAACAGGTTTT
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

ZNF317/MA1593.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGAACAGATT
TAACAGCAGACT
 A C G T A C G T G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGAACAGATT--
--AACAGATGGT
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAACAGATT--
--AACAKATGGY
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAACAGATT----
AAGAACATWHTGTTC
 A C G T G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAACAGATT--
--AACAGATGGC
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAACAGATT---
GGAACAGATGGCA
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGATT
CCAGGAACAG---
 A C G T A C G T A C G T G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAACAGATT--
--ACCAGATGGC
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAACAGATT----
-GGACAGATGGCAG
 G T C A A C T G C G T A C T G A A G T C C G T A T C A G C G T A C G A T C G A T A C G T A C G T A C G T A C G T
A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G