Information for 3-ACGGGGTC (Motif 3)

C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C
Reverse Opposite:
A T C G C T G A A G T C A G T C G T A C A T G C C T A G G C A T
p-value:1e-5
log p-value:-1.264e+01
Information Content per bp:1.797
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1022.5
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets55.6 +/- 25.5bp
Average Position of motif in Background49.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---ACGGGGTC------
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTC------
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ACGGGGTC--
-CGAGGTCAC
 C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T
A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTC-----
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTC-----
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ACGGGGTC--
NRRGGGTCTT
 C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACGGGGTC------
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ACGGGGTC-
-AGRGGTCA
 C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ACGGGGTC--
--GAGGTCAT
 C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T
A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ACGGGGTC----
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T C G T A G A T C A T C G C A T G C T A G A C T G A G C T A T G C A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A