Information for 6-GGGAACTAAT (Motif 11)


Reverse Opposite:

p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.1 +/- 60.3bp
Average Position of motif in Background110.4 +/- 47.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAACTAAT------
GCGAACTAATTAATGC

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGGAACTAAT-
-----CTAATT

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGGAACTAAT
TTAAGAGGAAGTTA-

PB0012.1_Elf3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGAACTAAT
AACAAGGAAGTAA-

PH0154.1_Prrx1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGAACTAAT--------
-GTAACTAATTAACTACT

PH0147.1_Pou3f2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAACTAAT-------
GATAATTAATTAGTTTG

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGAACTAAT---
ACCGGCAATTAATAAA

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGAACTAAT
AAGGAAGTA--

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGAACTAAT------
NNNCACTAATTANTNN

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGAACTAAT--------
-TAAACTAATTAGTGAAC