Information for 10-TCAATCAATC (Motif 15)


Reverse Opposite:

p-value:1e-5
log p-value:-1.349e+01
Information Content per bp:1.643
Number of Target Sequences with motif364.0
Percentage of Target Sequences with motif9.49%
Number of Background Sequences with motif3425.9
Percentage of Background Sequences with motif7.42%
Average Position of motif in Targets118.9 +/- 86.1bp
Average Position of motif in Background115.6 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0070.1_PBX1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---TCAATCAATC
CCATCAATCAAA-

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----TCAATCAATC-
GAAGATCAATCACTTA

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----TCAATCAATC-
GAAGATCAATCACTAA

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCAATCAATC-
-TCATCAATCA

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCAATCAATC--
GYCATCMATCAT

MA0594.1_Hoxa9/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCAATCAATC-
GCCATAAATCA

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TCAATCAATC---
CGACCCAATCAACGGTG

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCAATCAATC----
TCACCCATCAATAAACA

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCAATCAATC
NCTGTCAATCAN--

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TCAATCAATC--
ACTATGAATGAATGAT