Information for 6-TGTGAATACAGG (Motif 16)


Reverse Opposite:

p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.973
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets127.4 +/- 116.0bp
Average Position of motif in Background131.7 +/- 47.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGTGAATACAGG
NNNVCTGWGYAAACASN

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTGAATACAGG-
--TGTAAACAGGA

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TGTGAATACAGG
GAAAAGGTGTGAAAATT--

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTGAATACAGG
--TGTAAACA--

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATACAGG-
TACATGTGCACATAAAA

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTGAATACAGG
TGTGGATTNNN-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAATACAGG
CSTGGGAAAD----

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAATACAGG
AGGTGTTAAT-----

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGAATACAGG
TATGTAAACANG

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATACAGG-
AAAAAGTAAACAAAGAC