Information for 11-CCTAYAGCCC (Motif 18)


Reverse Opposite:

p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.933
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif114.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets113.4 +/- 81.8bp
Average Position of motif in Background122.6 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCTAYAGCCC
----CAGCC-

MA0163.1_PLAG1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTAYAGCCC-
CCCCCTTGGGCCCC

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTAYAGCCC-
GGTTAGAGACCT

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTAYAGCCC-
CCTCCCGCCCN

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTAYAGCCC---
----CTGCCCGCA

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTAYAGCCC--
CGACCAACTGCCGTG

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTAYAGCCC
--CACAGN--

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTAYAGCCC------
NNNTCCATCCCATAANN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCTAYAGCCC---
NNGATCTAGAACCTNNN

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTAYAGCCC-
TGACCTTTGCCCCA