Information for 9-TTVCCTCCACAT (Motif 19)


Reverse Opposite:

p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.4 +/- 64.6bp
Average Position of motif in Background62.6 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTVCCTCCACAT
----ATCCAC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTVCCTCCACAT
TTCCCGCCWG--

MA0471.1_E2F6/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTVCCTCCACAT
NCTTCCCGCCC---

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTVCCTCCACAT--
--NWAACCACADNN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTVCCTCCACAT
VDTTTCCCGCCA---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTVCCTCCACAT
NYTTCCCGCC----

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTVCCTCCACAT
TCCAATCCACA-

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTVCCTCCACAT--
CTTATCTCHMCATCT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTVCCTCCACAT---
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTVCCTCCACAT---
TCACCCCGCCCCAAATT