Information for 2-CTTATCTCCCTG (Motif 2)


Reverse Opposite:

p-value:1e-13
log p-value:-3.134e+01
Information Content per bp:1.730
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif141.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets117.7 +/- 88.3bp
Average Position of motif in Background112.9 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0482.1_Gata4/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTTATCTCCCTG
TCTTATCTCCC--

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTTATCTCCCTG
NNCTTATCTN----

MA0035.3_Gata1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTTATCTCCCTG
TTCTTATCTGT---

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTTATCTCCCTG
NCCTTATCTG----

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCTCCCTG
YCTTATCWVN---

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCTCCCTG
TCTTATCT-----

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CTTATCTCCCTG
AGATTCTTATCTGT---

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCTCCCTG
YSTTATCT-----

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTATCTCCCTG
NNANTCTTATCTNNNNN

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------CTTATCTCCCTG--
NNTNANTTCTTATCTCTANANN