Information for 16-CAGACCACCTGA (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-7.301e+00
Information Content per bp:1.973
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets121.9 +/- 60.2bp
Average Position of motif in Background84.1 +/- 53.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAGACCACCTGA--
CATAAGACCACCATTAC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGACCACCTGA-
---NNCACCTGNN

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAGACCACCTGA
---ACCACGTG-

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGACCACCTGA
---GCCATCTG-

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGACCACCTGA-
---ACCACGTGAC

MA0104.3_Mycn/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGACCACCTGA
---GCCACGTG-

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGACCACCTGA-
-CGACCATCTGTT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACCTGA----
CCNNACCATCTGGCCTN

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGACCACCTGA-----
ATAACCACTTGAAAATT

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGACCACCTGA-----
-TGACCACGTGGTCGGG