Information for 20-ATACTGCACT (Motif 27)


Reverse Opposite:

p-value:1e-2
log p-value:-6.860e+00
Information Content per bp:1.955
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets288.4 +/- 118.3bp
Average Position of motif in Background109.5 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)3.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATACTGCACT---
AATCGCACTGCATTCCG

MA0122.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATACTGCACT---
----NCCACTTAN

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATACTGCACT
-TACTNNNN-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATACTGCACT-
GGGATTGCATNN

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATACTGCACT-
GAAAAAATTGCAAGG

MA0466.1_CEBPB/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATACTGCACT-
ATTGTGCAATA

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATACTGCACT------
NNATTGGACTTTNGNN

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATACTGCACT--
ANATTTTTGCAANTN

MA0102.3_CEBPA/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATACTGCACT
NATTGTGCAAT

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ATACTGCACT----
----RSCACTYRAG