Information for 18-GTCCTTCCATTC (Motif 28)


Reverse Opposite:

p-value:1e-2
log p-value:-6.661e+00
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets70.4 +/- 45.4bp
Average Position of motif in Background96.5 +/- 73.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)2.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCCTTCCATTC
-ATTTTCCATT-

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCCTTCCATTC
---CTTCCGGT-

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCCTTCCATTC-----
-NNCATTCATTCATNNN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCCTTCCATTC--
--GTTTCACTTCCG

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCCTTCCATTC
CNGTCCTCCC----

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCTTCCATTC
--GCTTCC----

MA0136.1_ELF5/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCCTTCCATTC
-TACTTCCTT--

MA0081.1_SPIB/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTCCTTCCATTC
----TTCCTCT-

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCCTTCCATTC---
-NNGCACCTTTCTCC

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GTCCTTCCATTC
CCTTCCTTCCTTCCTTCC