Information for 20-CCCCTCTGTCAG (Motif 29)


Reverse Opposite:

p-value:1e-1
log p-value:-4.393e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.1 +/- 62.8bp
Average Position of motif in Background75.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCCTCTGTCAG-
---VGCTGWCAVB

MA0498.1_Meis1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCCCTCTGTCAG------
---AGCTGTCACTCACCT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCCTCTGTCAG
GCCATCTGTT--

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTCTGTCAG----
NNNCAGCTGTCAATATN

MA0143.3_Sox2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCCTCTGTCAG
--CCTTTGTT--

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCCCTCTGTCAG----
----SCTGTCARCACC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTCTGTCAG
TTCCCCCTAC-----

MA0155.1_INSM1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTCTGTCAG
CGCCCCCTGACA-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCCCTCTGTCAG--
----TGAGTCAGCA

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTCTGTCAG
NTCNTCCCCTATNNGNN