Information for 2-CCCATCTCAG (Motif 3)


Reverse Opposite:

p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.511
Number of Target Sequences with motif532.0
Percentage of Target Sequences with motif13.87%
Number of Background Sequences with motif4755.0
Percentage of Background Sequences with motif10.30%
Average Position of motif in Targets132.4 +/- 92.9bp
Average Position of motif in Background113.7 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCATCTCAG----
NNNTCCATCCCATAANN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCATCTCAG-
-AAATCACTGC

MA0483.1_Gfi1b/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCATCTCAG--
-AAATCACAGCA

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCATCTCAG----
ACCACTCTCGGTCAC

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCCATCTCAG-
-----CACAGN

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCCATCTCAG----
AGTATTCTCGGTTGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCCATCTCAG
CCCCCCCC--

POL002.1_INR/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCCATCTCAG----
------TCAGTCTT

MA0461.1_Atoh1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCATCTCAG
GCCATCTG--

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCCATCTCAG
CAAATCACTG