Information for 24-GTCGTCGTCG (Motif 30)


Reverse Opposite:

p-value:1e0
log p-value:-1.877e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.03%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets208.5 +/- 5.1bp
Average Position of motif in Background140.8 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCGTCGTCG----
TGGGCGACGTCGTTAA

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTCGTCGTCG-
NNANTGGTGGTCTTNNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCGTCG--
GNNATTTGTCGTAANN

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCGTCGTCG--------
---TCCGTCGCTTAAAAG

PB0038.1_Jundm2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTCGTCGTCG-
CCGATGACGTCATCGT

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTCGTCGTCG-
ACGATGACGTCATCGA

MA0027.1_En1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCGTCGTCG
AAGTAGTGCCC-

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCGTCGTCG
ATGACGTCATCN

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCGTCG
NTTATTCGTCATNC

MA0018.2_CREB1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTCGTCGTCG
TGACGTCA---