Information for 24-CTTGTTGAAGTG (Motif 31)


Reverse Opposite:

p-value:1e0
log p-value:-1.877e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.03%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 28.3bp
Average Position of motif in Background138.0 +/- 77.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTGTTGAAGTG--
----CTYRAGTGSY

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTTGAAGTG-
NAAANTTATTGAANCAN

MA0122.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTTGTTGAAGTG--
-----TTAAGTGGA

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGTTGAAGTG------
-NTNNTTAAGTGGTTANN

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGTTGAAGTG-----
-AANTTCAAGTGGCTTN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTTGTTGAAGTG---
-----TTGAGTGSTT

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTTGAAGTG---
NNNTATTGAATTGNNN

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTGTTGAAGTG-----
NANTTTCAAGTGGTTAN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGTTGAAGTG------
-NTNNTTAAGTGGNTNAN

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTGTTGAAGTG
--AGAGGAAGTG