Information for 25-GGTTGTGAGG (Motif 32)


Reverse Opposite:

p-value:1e0
log p-value:-8.195e-01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets96.0 +/- 51.3bp
Average Position of motif in Background116.4 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)4.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGTGAGG-
GTNTTGTTGTGANNT

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTGAGG
GTGTTGN----

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTGAGG---
NNCGTTGCTATGGNN

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGTTGTGAGG-------
NTNNNNNGTTGCTANGGNNCANA

MA0510.1_RFX5/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTGAGG---
NCTGTTGCCAGGGAG

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTGAGG-
CTGTTGCTAGGS

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTGAGG---
NCCGTTGCTANGNGN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTTGTGAGG--
-CTTGAGTGGCT

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTTGTGAGG---
AGNGTTCTAATGANN

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTGTGAGG-
-VBTGWCAGCB