Information for 1-ACCCCAGG (Motif 4)


Reverse Opposite:

p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.768
Number of Target Sequences with motif614.0
Percentage of Target Sequences with motif16.01%
Number of Background Sequences with motif5665.2
Percentage of Background Sequences with motif12.27%
Average Position of motif in Targets131.5 +/- 89.6bp
Average Position of motif in Background116.1 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ACCCCAGG---
CATGGCCCCAGGGCA

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGG---
GTCCCCAGGGGA

MA0154.2_EBF1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACCCCAGG--
GTCCCCAGGGA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACCCCAGG
TCCCCA--

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACCCCAGG----
GCCTCAGGGCAT

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACCCCAGG
ATCACCCCAT-

MA0003.2_TFAP2A/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACCCCAGG---
CATTGCCTCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCCCAGG----
SCCTSAGGSCAW

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCCCAGG
AAACCACAGC

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACCCCAGG
ATCACCCCAT-