Information for 1-ACTAGAGGGCTC (Motif 1)

C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A C T A G A T G C A G T C A G T C A C G T A G T C A G C T C T G A A C T G A G C T
p-value:1e-427
log p-value:-9.850e+02
Information Content per bp:1.905
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif85.71%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets132.1 +/- 69.5bp
Average Position of motif in Background158.6 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAGAGGGCTC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACTAGAGGGCTC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACTAGAGGGCTC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTAGAGGGCTC
AGCAGGGGGCGC
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACTAGAGGGCTC
AACAGATGGC--
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTAGAGGGCTC-----
CGAACAGTGCTCACTAT
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACTAGAGGGCTC------
-GGCGAGGGGTCAAGGGC
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ACTAGAGGGCTC
-------NGCTN
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACTAGAGGGCTC
TCACCTCTGGGCAG
 A C G T A C G T C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTAGAGGGCTC
--TTGAGTGSTT
 C T G A G T A C G A C T C T G A C T A G C G T A C T A G C T A G A T C G A G T C A C G T A G T C
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T