Information for 23-AAGCACCACA (Motif 28)

G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T A G A C G T A C T G A G T C A C G T A C G T
p-value:1e-32
log p-value:-7.591e+01
Information Content per bp:1.948
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif16.88%
Number of Background Sequences with motif170.9
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets147.3 +/- 140.5bp
Average Position of motif in Background128.1 +/- 92.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAGCACCACA---
-NWAACCACADNN
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAGCACCACA--
--AAACCACAGC
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACCACA---------
GAAGTANCACGAATNMRAGT
 A C G T G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGCACCACA---
--AAACCACAGAN
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGCACCACA-
-NAAACCACAG
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGCACCACA--
--AAACCACANN
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AAGCACCACA---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGCACCACA
---ATCCAC-
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCACCACA-
-ATCACCCCAT
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGCACCACA-
-ATCACCCCAC
 G T C A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C