Information for 25-CATGAAAGTG (Motif 30)

A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
Reverse Opposite:
T A G C C G T A G A T C C G A T A G C T A G C T G A T C G T C A C A G T T A C G
p-value:1e-24
log p-value:-5.593e+01
Information Content per bp:1.484
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.79%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.2 +/- 114.6bp
Average Position of motif in Background91.1 +/- 84.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CATGAAAGTG
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CATGAAAGTG
VSCACATCAAAG--
 A C G T A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CATGAAAGTG
-ATTAAA---
 A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CATGAAAGTG---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CATGAAAGTG
ANATCAAAGNN
 A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CATGAAAGTG-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CATGAAAGTG
GGCMATGAAA---
 A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CATGAAAGTG
VGCCATAAAA---
 A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CATGAAAGTG---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CATGAAAGTG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T G C G T C A C A G T C T A G T C G A T C G A G C T A C T A G G C A T A T C G A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A