Information for 8-GGGACATAGTGA (Motif 8)

A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A
Reverse Opposite:
A G C T A G T C C T G A A G T C A G C T C T G A A C G T A C T G A C G T A G T C A G T C A T G C
p-value:1e-248
log p-value:-5.731e+02
Information Content per bp:1.935
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif57.79%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets137.3 +/- 95.0bp
Average Position of motif in Background153.5 +/- 91.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGACATAGTGA---
AGGNCANNGTGACCT
 A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGACATAGTGA----
-GGTCANNGTGACCTN
 A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGACATAGTGA----
GGGAACATTGTGTTCCC
 A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGACATAGTGA----
NGGAACATNATGTACCC
 A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

ESR1/MA0112.3/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGACATAGTGA----
CAGGTCACCGTGACCTT
 A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGACATAGTGA----
GGGAACACGGTGTACCC
 A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGACATAGTGA----
AGNACAGNCTGTTCTN
 A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGACATAGTGA----
AGNACANNNTGTNCTN
 A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGACATAGTGA--
VAGRACAKWCTGTYC
 A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGACATAGTGA-----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A T C G C T A G C T A G C G T A A G T C C G T A A G C T C T G A A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T