Information for 10-CAGCCTGVCAGG (Motif 10)

G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
Reverse Opposite:
A G T C A G T C C A G T C T A G A T G C T A G C C G T A C T A G C T A G A G T C A G C T C T A G
p-value:1e-99
log p-value:-2.294e+02
Information Content per bp:1.755
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif29.18%
Number of Background Sequences with motif340.7
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets164.7 +/- 95.9bp
Average Position of motif in Background173.4 +/- 133.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF460/MA1596.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGCCTGVCAGG
GCCTCAGCCTCCCGAG
 A C G T A C G T A C G T A C G T G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
T C A G A T G C A T G C A G C T A T G C T G C A C T A G A G T C A T G C C A G T A T G C A T G C A G T C T C A G T C G A T C A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCCTGVCAGG
--VGCTGWCAVB
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGCCTGVCAGG
---CTTGGCAA-
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCTGVCAGG
TGGCAGNCTGCCAG-
 A C G T A C G T A C G T G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTGVCAGG--
SCAGYCADGCATGAC
 A C G T G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGCCTGVCAGG
----TTGACAGC
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCTGVCAGG
BCAGACWA-----
 A C G T G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCCTGVCAGG
CAGCC-------
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGCCTGVCAGG
--VGCTGGCA--
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGCCTGVCAGG-
CTGTCTGTCACCT
 G A T C T C G A C T A G A G T C G A T C C G A T A T C G T A C G A G T C G T C A T C A G T C A G A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T