Information for 23-AAAGAGGGTGTC (Motif 26)

C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A G T A C C G T A A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T
p-value:1e-42
log p-value:-9.692e+01
Information Content per bp:1.919
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif8.90%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets170.3 +/- 119.5bp
Average Position of motif in Background128.2 +/- 136.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGGGTGTC
AAAAAGAGGAAGTA
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAGAGGGTGTC------
-TNNNNGGTGTCATNTNT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTGTC------
-GATAGGGTATCACTAAT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTGTC------
-GATAGGGTATCACTAAT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTGTC------
-AATGGGGTATCACGTTT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGAGGGTGTC--
----GAGGTGTGAA
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

SPI1/MA0080.5/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAGAGGGTGTC-----
AAAAAAGAGGAAGTGAAAAA
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAAGAGGGTGTC-
-----AGGTGTCA
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTGTC------
-AATAGGGTATCAATTAT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAGAGGGTGTC------
-GATGGGGTATCATTTTT
 C G T A C G T A C G T A A C T G C G T A C T A G C T A G A C T G C G A T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T