Information for 19-WGTCACAATC (Motif 27)

C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
Reverse Opposite:
A C T G C T G A A G C T A C G T A C T G A G C T A C T G C G T A A G T C C G T A
p-value:1e-42
log p-value:-9.678e+01
Information Content per bp:1.868
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif17.44%
Number of Background Sequences with motif454.7
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets162.0 +/- 120.6bp
Average Position of motif in Background154.5 +/- 152.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--WGTCACAATC
CCTGTCAA----
 A C G T A C G T C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WGTCACAATC
NTGTCAN----
 A C G T C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WGTCACAATC-----
-GTCACGCTCNCTGA
 C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---WGTCACAATC
AATTGTTACATT-
 A C G T A C G T A C G T C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WGTCACAATC--
----CCAATCAA
 C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:WGTCACAATC
AGTCACGC--
 C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WGTCACAATC--
---GACAATGNN
 C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------WGTCACAATC
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WGTCACAATC-
-GTCACATGAY
 C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--WGTCACAATC
GCTGTCAA----
 A C G T A C G T C G A T C T A G A C G T A G T C C T G A A G T C C G T A C T G A A G C T A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T