Information for 3-GGCTYRTGCTAC (Motif 3)

C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
Reverse Opposite:
A C T G A G C T C T G A C T A G G T A C C T G A A G C T C T A G C G T A A C T G A G T C G A T C
p-value:1e-133
log p-value:-3.070e+02
Information Content per bp:1.749
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif31.67%
Number of Background Sequences with motif193.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets177.0 +/- 98.3bp
Average Position of motif in Background160.0 +/- 151.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTYRTGCTAC
NGCTN-------
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCTYRTGCTAC
GKVTCADRTTWC
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTYRTGCTAC
GKMTCADRTTWC
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCTYRTGCTAC-------
---ACATGCTACCTAATAC
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTYRTGCTAC
-GCTCGGSCTC-
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTYRTGCTAC
NGGATTAN-----
 A C G T C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGCTYRTGCTAC-------
---TNNTGCTACTGTNNNN
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

ZBTB6/MA1581.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCTYRTGCTAC
NNGGCTCAAGGNN-
 A C G T A C G T C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C A C G T

OSR1/MA1542.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGCTYRTGCTAC----
------TGCTACTGTT
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

HLF/MA0043.3/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCTYRTGCTAC--
TTGTTATGCAACAA
 C T A G C T A G A G T C A C G T A G T C C T G A A G C T C A T G A G T C G A C T C T G A A G T C A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A