Information for 6-CACAGAGGTTTC (Motif 6)

A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A C G T A A G T C A G T C A C G T A G T C A C G T C A T G A G C T C T A G
p-value:1e-120
log p-value:-2.774e+02
Information Content per bp:1.944
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif21.35%
Number of Background Sequences with motif38.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets165.6 +/- 135.6bp
Average Position of motif in Background136.8 +/- 184.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a/MA1618.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACAGAGGTTTC
AAACAGATGTTTA
 A C G T A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CACAGAGGTTTC---
-----TGGTTTCAGT
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAGAGGTTTC
TCCAGATGTT--
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACAGAGGTTTC--
--CAGCTGTTTCCT
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C A C G T A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

ZBTB18/MA0698.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACAGAGGTTTC
CATCCAGATGTTC-
 A C G T A C G T A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACAGAGGTTTC-
-ACAAAGGNBCCT
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

RUNX3/MA0684.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAGAGGTTTC
NNTTGAGGTTNN
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACAGAGGTTTC-----
-GCGGAGGTGTCGCCTC
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

GRHL2/MA1105.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACAGAGGTTTC
AAAACAGGTTTT
 A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACAGAGGTTTC
RHHCAGAGAGGB---
 A C G T A C G T A C G T A G T C C T G A G A T C C G T A C T A G C G T A C T A G C T A G A C G T A C G T A G C T A G T C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T