Information for 9-GGCAGCTCCAAG (Motif 9)

A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
Reverse Opposite:
A G T C G A C T C G A T C T A G C T A G C G T A C T A G T A G C A C G T T A C G T A G C A G T C
p-value:1e-100
log p-value:-2.319e+02
Information Content per bp:1.786
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif26.33%
Number of Background Sequences with motif215.3
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets175.4 +/- 119.9bp
Average Position of motif in Background150.9 +/- 140.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCTCCAAG
GGGGATTTCC---
 A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCTCCAAG
GGGAATTTCC---
 A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCTCCAAG
NGGGGATTTCCC--
 A C G T A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTCCAAG
GGGAATTTCC---
 A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCTCCAAG
GGGGATTTCC---
 A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

Stat5a/MA1624.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCAGCTCCAAG----
----TTTCCAAGAAAT
 A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTCCAAG
CGGCTGTTCC---
 A C G T A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCAGCTCCAAG--
---ATTTCCAAGAA
 A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCAGCTCCAAG-
---ACATCAAAGG
 A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G A C G T
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCAGCTCCAAG-
---ACWTCAAAGG
 A C T G A T C G A T G C G T C A A T C G A G T C A C G T A G T C A G T C C G T A C T G A C T A G A C G T
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G