Information for 5-GYTCGTSG (Motif 4)

A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
Reverse Opposite:
G T A C A T C G C G T A A G T C A C T G C T G A C T G A A G T C
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.836
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif1090.6
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets145.2 +/- 39.7bp
Average Position of motif in Background99.0 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GYTCGTSG
GCACGT--
 A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
C A T G A G T C T C G A A G T C C T A G G A C T A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GYTCGTSG---
NHGTCGTGAYDN
 A C G T A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G A C G T A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

MYC/MA0147.4/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GYTCGTSG
GCACGTGG
 A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G

ZBED2(Zf)/SUIT2-ZBED2.HA-ChIP-Seq(GSE141606)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GYTCGTSG
NRGTTTCGGK-
 A C G T A C G T A C G T A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
A G T C C T A G A T C G C A G T C G A T A G C T G T A C A C T G C A T G C A T G A C G T

Npas4/MA1995.2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GYTCGTSG-
--TCGTGAC
 A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G A C G T
A C G T A C G T C A G T T A G C T C A G C A G T A T C G G T C A A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GYTCGTSG
BGCACGTA-
 A C G T A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

Zfp541(Zf)/Sperm-Zfp541-ChIP-Seq(GSE163916)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GYTCGTSG
NRSCWCGYGC
 A C G T A C G T A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
A G C T C T A G A T C G T A G C C G A T G A T C T A C G G A T C C A T G T A G C

EPAS1/MA2325.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GYTCGTSG
CGCACGTAC
 A C G T A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G
A T G C C A T G A G T C T C G A A T G C C T A G A G C T T G C A A T G C

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GYTCGTSG--------
-TCCGTCGCTTAAAAG
 A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

ZBTB9(Zf)/HEK293T-ZBTB9-ChIP-Seq(GSE251687)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GYTCGTSG--
YYHCGTGGCY
 A C T G A G C T A G C T A G T C C T A G A C G T A T G C A C T G A C G T A C G T
G A C T A G C T G T A C G T A C A C T G A C G T A C T G A C T G G A T C G A C T