| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.428e+01 | 0.0003 | 45.0 | 20.09% | 9024.7 | 9.27% | motif file (matrix) |
svg |
| 2 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.351e+01 | 0.0003 | 40.0 | 17.86% | 7765.9 | 7.98% | motif file (matrix) |
svg |
| 3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-5 | -1.319e+01 | 0.0003 | 38.0 | 16.96% | 7275.1 | 7.48% | motif file (matrix) |
svg |
| 4 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -1.137e+01 | 0.0014 | 32.0 | 14.29% | 6076.7 | 6.24% | motif file (matrix) |
svg |
| 5 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.062e+01 | 0.0023 | 65.0 | 29.02% | 17289.3 | 17.77% | motif file (matrix) |
svg |
| 6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-4 | -1.053e+01 | 0.0023 | 30.0 | 13.39% | 5751.8 | 5.91% | motif file (matrix) |
svg |
| 7 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -9.311e+00 | 0.0061 | 31.0 | 13.84% | 6458.8 | 6.64% | motif file (matrix) |
svg |
| 8 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -9.185e+00 | 0.0061 | 27.0 | 12.05% | 5299.3 | 5.45% | motif file (matrix) |
svg |
| 9 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.984e+00 | 0.0179 | 19.0 | 8.48% | 3370.8 | 3.46% | motif file (matrix) |
svg |
| 10 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.939e+00 | 0.0179 | 15.0 | 6.70% | 2316.2 | 2.38% | motif file (matrix) |
svg |
| 11 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.238e+00 | 0.0308 | 20.0 | 8.93% | 3875.7 | 3.98% | motif file (matrix) |
svg |
| 12 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -6.913e+00 | 0.0391 | 55.0 | 24.55% | 15871.4 | 16.31% | motif file (matrix) |
svg |
| 13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.891e+00 | 0.0391 | 13.0 | 5.80% | 2041.5 | 2.10% | motif file (matrix) |
svg |
| 14 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.785e+00 | 0.0391 | 32.0 | 14.29% | 7826.2 | 8.04% | motif file (matrix) |
svg |
| 15 |
| FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer | 1e-2 | -6.664e+00 | 0.0401 | 28.0 | 12.50% | 6566.4 | 6.75% | motif file (matrix) |
svg |
| 16 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.346e+00 | 0.0517 | 22.0 | 9.82% | 4791.3 | 4.92% | motif file (matrix) |
svg |
| 17 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-2 | -6.262e+00 | 0.0530 | 54.0 | 24.11% | 15952.2 | 16.39% | motif file (matrix) |
svg |
| 18 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.215e+00 | 0.0530 | 19.0 | 8.48% | 3922.9 | 4.03% | motif file (matrix) |
svg |
| 19 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.933e+00 | 0.0658 | 21.0 | 9.38% | 4643.0 | 4.77% | motif file (matrix) |
svg |
| 20 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.873e+00 | 0.0664 | 30.0 | 13.39% | 7611.0 | 7.82% | motif file (matrix) |
svg |
| 21 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -5.811e+00 | 0.0673 | 26.0 | 11.61% | 6304.2 | 6.48% | motif file (matrix) |
svg |
| 22 |
| RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer | 1e-2 | -5.762e+00 | 0.0674 | 8.0 | 3.57% | 1043.7 | 1.07% | motif file (matrix) |
svg |
| 23 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-2 | -5.528e+00 | 0.0816 | 49.0 | 21.88% | 14623.6 | 15.03% | motif file (matrix) |
svg |
| 24 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -5.483e+00 | 0.0818 | 41.0 | 18.30% | 11711.5 | 12.03% | motif file (matrix) |
svg |
| 25 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -5.401e+00 | 0.0852 | 37.0 | 16.52% | 10325.0 | 10.61% | motif file (matrix) |
svg |
| 26 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.397e+00 | 0.0852 | 107.0 | 47.77% | 37920.5 | 38.97% | motif file (matrix) |
svg |
| 27 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.348e+00 | 0.0852 | 64.0 | 28.57% | 20494.5 | 21.06% | motif file (matrix) |
svg |
| 28 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-2 | -5.347e+00 | 0.0852 | 59.0 | 26.34% | 18558.8 | 19.07% | motif file (matrix) |
svg |
| 29 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -5.266e+00 | 0.0852 | 40.0 | 17.86% | 11495.7 | 11.81% | motif file (matrix) |
svg |
| 30 |
| ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer | 1e-2 | -5.219e+00 | 0.0852 | 39.0 | 17.41% | 11164.2 | 11.47% | motif file (matrix) |
svg |
| 31 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.175e+00 | 0.0862 | 59.0 | 26.34% | 18705.3 | 19.22% | motif file (matrix) |
svg |
| 32 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.172e+00 | 0.0862 | 23.0 | 10.27% | 5620.9 | 5.78% | motif file (matrix) |
svg |
| 33 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.170e+00 | 0.0862 | 7.0 | 3.12% | 915.1 | 0.94% | motif file (matrix) |
svg |
| 34 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.140e+00 | 0.0862 | 107.0 | 47.77% | 38199.3 | 39.25% | motif file (matrix) |
svg |
| 35 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.116e+00 | 0.0862 | 10.0 | 4.46% | 1679.0 | 1.73% | motif file (matrix) |
svg |
| 36 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -5.039e+00 | 0.0862 | 35.0 | 15.62% | 9842.5 | 10.11% | motif file (matrix) |
svg |
| 37 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -4.887e+00 | 0.0962 | 28.0 | 12.50% | 7466.6 | 7.67% | motif file (matrix) |
svg |
| 38 |
| Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer | 1e-2 | -4.875e+00 | 0.0962 | 18.0 | 8.04% | 4131.7 | 4.25% | motif file (matrix) |
svg |
| 39 |
| Gsx2(Homeobox)/LGE-Gsx2.Flag-ChIP-Seq(GSE162589)/Homer | 1e-2 | -4.655e+00 | 0.1151 | 36.0 | 16.07% | 10464.6 | 10.75% | motif file (matrix) |
svg |
| 40 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.625e+00 | 0.1156 | 53.0 | 23.66% | 16870.8 | 17.34% | motif file (matrix) |
svg |
| 41 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -4.622e+00 | 0.1156 | 27.0 | 12.05% | 7274.2 | 7.47% | motif file (matrix) |
svg |