chrom	start	end	name	score	strand	step2.1_Star_CC-Hu-XH-1_S1_L003_R1_001.Unique.stranded.bg	step2.1_Star_CC-Hu-XH-2_S2_L003_R1_001.Unique.stranded.bg	step2.1_Star_CC-Hu-XH-5_S5_L003_R1_001.Unique.stranded.bg	step2.1_Star_CC-Hu-XH-6_S6_L003_R1_001.Unique.stranded.bg
chr1	601174	601748	-	repeat_id "L1MD3,chr1,601174,601748";repeat_class "LINE";repeat_family "L1";	chr1	601398	601577	exon	assembly	-	gene_id "ENSG00000230021.9"; ID "141"; transcript_id "ENST00000440196.3"; exon "4"; exon_id "chr1.54"; pos "mid"	0	0	0	0
chr1	828987	829262	-	repeat_id "AluSp,chr1,828987,829262";repeat_class "SINE";repeat_family "Alu";	chr1	829003	829104	exon	assembly	+	gene_id "ENSG00000228794.8"; ID "244"; transcript_id "transcript414.chr1.nnic"; exon "2"; exon_id "chr1.297"; pos "mid"	0	0	0	0
chr1	1388241	1388543	+	repeat_id "AluSc,chr1,1388241,1388543";repeat_class "SINE";repeat_family "Alu";	chr1	1388492	1388510	exon	assembly	-	gene_id "ENSG00000221978.11"; ID "832"; transcript_id "ENST00000480479.5"; exon "5"; exon_id "chr1.1210"; pos "mid"	13.8307	2.54275	5.52555	0
chr1	1388613	1388794	+	repeat_id "AluSg4,chr1,1388613,1388794";repeat_class "SINE";repeat_family "Alu";	chr1	1388626	1388743	exon	assembly	-	gene_id "ENSG00000221978.11"; ID "831"; transcript_id "ENST00000480479.5"; exon "4"; exon_id "chr1.1209"; pos "mid"	243.829	15.765	34.2584	8.87364
chr1	6018629	6018877	+	repeat_id "MLT1A,chr1,6018629,6018877";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	6018635	6018926	exon	assembly	+	gene_id "ENSG00000069424.14"; ID "2531"; transcript_id "transcript5866.chr1.nic"; exon "2"; exon_id "chr1.3078"; pos "last"	20.49	0	0	0
chr1	6806942	6807209	-	repeat_id "L2b,chr1,6806942,6807209";repeat_class "LINE";repeat_family "L2";	chr1	6806983	6807088	exon	assembly	+	gene_id "ENSG00000171735.18"; ID "3213"; transcript_id "ENST00000467404.6"; exon "2"; exon_id "chr1.3719"; pos "mid"	0	0	0	0
chr1	6853069	6854099	+	repeat_id "L1MEg,chr1,6853069,6854099";repeat_class "LINE";repeat_family "L1";	chr1	6853095	6853189	exon	assembly	+	gene_id "ENSG00000171735.18"; ID "3221"; transcript_id "ENST00000472283.1"; exon "1"; exon_id "chr1.3724"; pos "first"	0	0	0	0
chr1	9672426	9672723	-	repeat_id "AluJo,chr1,9672426,9672723";repeat_class "SINE";repeat_family "Alu";	chr1	9672426	9672719	exon	assembly	-	gene_id "ENSG00000231789.2"; ID "4185"; transcript_id "ENST00000415330.2"; exon "3"; exon_id "chr1.4416"; pos "last"	0	0	0	0
chr1	9680798	9681157	-	repeat_id "MLT1F1,chr1,9680798,9681157";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	9680845	9681135	exon	assembly	-	gene_id "ENSG00000231789.2"; ID "4181"; transcript_id "transcript13928.chr1.nic"; exon "2"; exon_id "chr1.4413"; pos "last"	0	0	0	0
chr1	10519781	10520139	-	repeat_id "AluJb,chr1,10519781,10520139";repeat_class "SINE";repeat_family "Alu";	chr1	10519803	10520012	exon	assembly	+	gene_id "ENSG00000142655.12"; ID "4757"; transcript_id "transcript16839.chr1.nnic"; exon "3"; exon_id "chr1.4836"; pos "last"	2.04898	0	0	0
chr1	11817980	11818114	+	repeat_id "FLAM_C,chr1,11817980,11818114";repeat_class "SINE";repeat_family "Alu";	chr1	11817973	11818128	exon	assembly	+	gene_id "ENSG00000011021.21"; ID "5567"; transcript_id "transcript19431.chr1.nnic"; exon "5"; exon_id "chr1.5495"; pos "last"	0	0	0	0
chr1	11976180	11976478	+	repeat_id "AluSx,chr1,11976180,11976478";repeat_class "SINE";repeat_family "Alu";	chr1	11976368	11976476	exon	assembly	+	gene_id "ENSG00000083444.16"; ID "5699"; transcript_id "transcript19566.chr1.nnic"; exon "20"; exon_id "chr1.5658"; pos "last"	0	0	0	0
chr1	16316454	16316754	+	repeat_id "AluSx,chr1,16316454,16316754";repeat_class "SINE";repeat_family "Alu";	chr1	16316437	16316571	exon	assembly	-	gene_id "ENSG00000037637.10"; ID "7383"; transcript_id "transcript22415.chr1.nnic"; exon "2"; exon_id "chr1.7175"; pos "mid"	0	0	0	0
chr1	16635031	16635337	-	repeat_id "AluSx,chr1,16635031,16635337";repeat_class "SINE";repeat_family "Alu";	chr1	16635027	16635168	exon	assembly	-	gene_id "ENSG00000215908.10"; ID "7729"; transcript_id "ENST00000639456.1"; exon "4"; exon_id "chr1.7417"; pos "mid"	59.4206	29.4959	0	0
chr1	19215679	19215988	-	repeat_id "AluSz,chr1,19215679,19215988";repeat_class "SINE";repeat_family "Alu";	chr1	19215668	19215728	exon	assembly	-	gene_id "ENSG00000127463.14"; ID "8712"; transcript_id "transcript25409.chr1.nnic"; exon "24"; exon_id "chr1.8309"; pos "last"	0	16.7821	0	0
chr1	22074067	22074374	-	repeat_id "AluSc8,chr1,22074067,22074374";repeat_class "SINE";repeat_family "Alu";	chr1	22074094	22074219	exon	assembly	+	gene_id "ENSG00000070831.15"; ID "10175"; transcript_id "ENST00000344548.7"; exon "2"; exon_id "chr1.9684"; pos "mid"	0	0	0	0
chr1	23066053	23066153	-	repeat_id "UCON4,chr1,23066053,23066153";repeat_class "Unknown";repeat_family "Unknown";	chr1	23066060	23066071	exon	assembly	+	gene_id "ENSG00000004487.15"; ID "10330"; transcript_id "ENST00000400181.8"; exon "10"; exon_id "chr1.9841"; pos "mid"	0	0	0	0
chr1	23109484	23109838	+	repeat_id "Tigger4b,chr1,23109484,23109838";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr1	23109585	23109650	exon	assembly	-	gene_id "ENSG00000169641.13"; ID "10393"; transcript_id "ENST00000471849.5"; exon "2"; exon_id "chr1.9870"; pos "mid"	7.1715	2.0342	0	0
chr1	26953675	26953977	+	repeat_id "AluSz,chr1,26953675,26953977";repeat_class "SINE";repeat_family "Alu";	chr1	26953846	26953947	exon	assembly	-	gene_id "ENSG00000175707.8"; ID "13167"; transcript_id "transcript42640.chr1.nnic"; exon "2"; exon_id "chr1.11975"; pos "mid"	40.9797	0	9.94599	0
chr1	26953675	26953977	+	repeat_id "AluSz,chr1,26953675,26953977";repeat_class "SINE";repeat_family "Alu";	chr1	26953846	26953947	exon	assembly	-	gene_id "ENSG00000175707.8"; ID "13173"; transcript_id "transcript42641.chr1.nnic"; exon "2"; exon_id "chr1.11975"; pos "mid"	40.9797	0	9.94599	0
chr1	27544760	27545336	+	repeat_id "L2c,chr1,27544760,27545336";repeat_class "LINE";repeat_family "L2";	chr1	27545256	27545321	exon	assembly	-	gene_id "ENSG00000126705.13"; ID "13682"; transcript_id "transcript43872.chr1.nnic"; exon "2"; exon_id "chr1.12314"; pos "mid"	5.12248	0	0	0
chr1	28506188	28506484	-	repeat_id "AluSx,chr1,28506188,28506484";repeat_class "SINE";repeat_family "Alu";	chr1	28506220	28506327	exon	assembly	+	gene_id "ENSG00000242125.3"; ID "14558"; transcript_id "transcript47115.chr1.nnic"; exon "2"; exon_id "chr1.12768"; pos "mid"	0	1.0171	72.9376	0
chr1	28508558	28508759	+	repeat_id "U17,chr1,28508558,28508759";repeat_class "snRNA";repeat_family "snRNA";	chr1	28508559	28508762	exon	assembly	+	gene_id "ENSG00000200087.1"; ID "14576"; transcript_id "ENST00000363217.1"; exon "1"; exon_id "chr1.12776";	3657.94	5018.34	584.604	1790.51
chr1	28574531	28574703	-	repeat_id "AluJb,chr1,28574531,28574703";repeat_class "SINE";repeat_family "Alu";	chr1	28574589	28574718	exon	assembly	+	gene_id "ENSG00000180098.9"; ID "14650"; transcript_id "ENST00000484775.1"; exon "7"; exon_id "chr1.12804"; pos "mid"	0	17.7992	0	0
chr1	31410298	31410441	-	repeat_id "MIRc,chr1,31410298,31410441";repeat_class "SINE";repeat_family "MIR";	chr1	31410385	31410435	exon	assembly	+	gene_id "ENSG00000168528.11"; ID "15609"; transcript_id "ENST00000373710.5"; exon "2"; exon_id "chr1.13507"; pos "mid"	0	0	0	0
chr1	33270478	33270620	-	repeat_id "L2c,chr1,33270478,33270620";repeat_class "LINE";repeat_family "L2";	chr1	33270487	33270612	exon	assembly	+	gene_id "ENSG00000160094.14"; ID "17255"; transcript_id "ENST00000539719.5"; exon "2"; exon_id "chr1.14868"; pos "mid"	0	0	0	0
chr1	34760012	34760159	-	repeat_id "L2c,chr1,34760012,34760159";repeat_class "LINE";repeat_family "L2";	chr1	34760057	34760135	exon	assembly	+	gene_id "ENSG00000189433.5"; ID "17425"; transcript_id "transcript58828.chr1.nnic"; exon "2"; exon_id "chr1.15129"; pos "mid"	0	0	0	0
chr1	34857742	34858088	-	repeat_id "MER1B,chr1,34857742,34858088";repeat_class "DNA";repeat_family "hAT-Charlie";	chr1	34858013	34858085	exon	assembly	-	gene_id "ENSG00000163866.8"; ID "17456"; transcript_id "transcript58960.chr1.nnic"; exon "2"; exon_id "chr1.15151"; pos "mid"	0	0	0	0
chr1	35093288	35093596	-	repeat_id "AluSz,chr1,35093288,35093596";repeat_class "SINE";repeat_family "Alu";	chr1	35093320	35093441	exon	assembly	+	gene_id "ENSG00000197056.9"; ID "17608"; transcript_id "transcript59375.chr1.nic"; exon "2"; exon_id "chr1.15245"; pos "mid"	18.441	29.4958	0	0
chr1	36395497	36395795	+	repeat_id "AluSx1,chr1,36395497,36395795";repeat_class "SINE";repeat_family "Alu";	chr1	36395653	36395768	exon	assembly	-	gene_id "ENSG00000181817.5"; ID "18777"; transcript_id "transcript64825.chr1.nnic"; exon "2"; exon_id "chr1.15949"; pos "mid"	0	0	0	32.5368
chr1	36428332	36428505	-	repeat_id "L1ME4b,chr1,36428332,36428505";repeat_class "LINE";repeat_family "L1";	chr1	36428299	36428475	exon	assembly	-	gene_id "ENSG00000116885.18"; ID "18836"; transcript_id "ENST00000354267.3"; exon "5"; exon_id "chr1.16007"; pos "last"	0	0	8.84088	0
chr1	37456346	37456645	+	repeat_id "AluJb,chr1,37456346,37456645";repeat_class "SINE";repeat_family "Alu";	chr1	37456367	37456459	exon	assembly	-	gene_id "ENSG00000233621.1"; ID "18887"; transcript_id "ENST00000424989.1"; exon "2"; exon_id "chr1.16140"; pos "mid"	18.441	0	0	0
chr1	40093913	40094040	+	repeat_id "AluJr4,chr1,40093913,40094040";repeat_class "SINE";repeat_family "Alu";	chr1	40093933	40094019	exon	assembly	-	gene_id "ENSG00000131238.17"; ID "20373"; transcript_id "ENST00000641471.1"; exon "2"; exon_id "chr1.17310"; pos "mid"	0	0	0	0
chr1	40403688	40403808	-	repeat_id "MIRb,chr1,40403688,40403808";repeat_class "SINE";repeat_family "MIR";	chr1	40403684	40403746	exon	assembly	+	gene_id "ENSG00000084070.11"; ID "20602"; transcript_id "transcript72152.chr1.nnic"; exon "2"; exon_id "chr1.17476"; pos "mid"	0	0	0	0
chr1	40544360	40544649	-	repeat_id "AluSc,chr1,40544360,40544649";repeat_class "SINE";repeat_family "Alu";	chr1	40544397	40544679	exon	assembly	+	gene_id "ENSG00000117010.15"; ID "20808"; transcript_id "transcript72279.chr1.nnic"; exon "6"; exon_id "chr1.17590"; pos "last"	0	0	0	0
chr1	40544360	40544649	-	repeat_id "AluSc,chr1,40544360,40544649";repeat_class "SINE";repeat_family "Alu";	chr1	40544397	40544679	exon	assembly	+	gene_id "ENSG00000117010.15"; ID "20813"; transcript_id "transcript72357.chr1.nic"; exon "4"; exon_id "chr1.17590"; pos "last"	0	0	0	0
chr1	41033960	41034232	-	repeat_id "MIRc,chr1,41033960,41034232";repeat_class "SINE";repeat_family "MIR";	chr1	41033983	41034048	exon	assembly	-	gene_id "ENSG00000010803.16"; ID "21078"; transcript_id "transcript73371.chr1.nic"; exon "3"; exon_id "chr1.17831"; pos "mid"	0	0	0	0
chr1	43915352	43915530	-	repeat_id "MIR,chr1,43915352,43915530";repeat_class "SINE";repeat_family "MIR";	chr1	43915326	43915468	exon	assembly	+	gene_id "ENSG00000126091.19"; ID "22543"; transcript_id "transcript77821.chr1.nnic"; exon "1"; exon_id "chr1.19031"; pos "first"	0	0	79.5682	0
chr1	43915352	43915530	-	repeat_id "MIR,chr1,43915352,43915530";repeat_class "SINE";repeat_family "MIR";	chr1	43915350	43915539	exon	assembly	+	gene_id "ENSG00000126091.19"; ID "22548"; transcript_id "transcript77825.chr1.nnic"; exon "1"; exon_id "chr1.19032"; pos "first"	0	0	79.5682	0
chr1	45600221	45601560	-	repeat_id "L1ME1,chr1,45600221,45601560";repeat_class "LINE";repeat_family "L1";	chr1	45600385	45600457	exon	assembly	+	gene_id "ENSG00000132780.16"; ID "24344"; transcript_id "ENST00000453748.5"; exon "3"; exon_id "chr1.20292"; pos "mid"	0	0	0	0
chr1	46196159	46196475	+	repeat_id "L2b,chr1,46196159,46196475";repeat_class "LINE";repeat_family "L2";	chr1	46196202	46196489	exon	assembly	+	gene_id "ENSG00000117472.9"; ID "24955"; transcript_id "transcript85036.chr1.nnic"; exon "8"; exon_id "chr1.20614"; pos "last"	0	0	0	0
chr1	51576909	51577311	+	repeat_id "MSTB,chr1,51576909,51577311";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	51577179	51577256	exon	assembly	+	gene_id "ENSG00000117859.18"; ID "26468"; transcript_id "ENST00000371714.5"; exon "1"; exon_id "chr1.21975"; pos "first"	0	0	0	0
chr1	51598037	51598235	-	repeat_id "MIRb,chr1,51598037,51598235";repeat_class "SINE";repeat_family "MIR";	chr1	51598124	51598193	exon	assembly	+	gene_id "ENSG00000117859.18"; ID "26469"; transcript_id "ENST00000371714.5"; exon "2"; exon_id "chr1.21976"; pos "mid"	0	0	0	0
chr1	51614293	51614604	-	repeat_id "AluJr,chr1,51614293,51614604";repeat_class "SINE";repeat_family "Alu";	chr1	51614305	51614419	exon	assembly	+	gene_id "ENSG00000117859.18"; ID "26470"; transcript_id "ENST00000371714.5"; exon "3"; exon_id "chr1.21977"; pos "mid"	0	0	0	0
chr1	52370942	52371398	-	repeat_id "L1MC4,chr1,52370942,52371398";repeat_class "LINE";repeat_family "L1";	chr1	52370994	52371442	exon	assembly	-	gene_id "ENSG00000085840.12"; ID "27110"; transcript_id "transcript90490.chr1.nnic"; exon "7"; exon_id "chr1.22329"; pos "last"	0	0	0	0
chr1	52684455	52685549	-	repeat_id "L1MC1,chr1,52684455,52685549";repeat_class "LINE";repeat_family "L1";	chr1	52684452	52684762	exon	assembly	-	gene_id "ENSG00000162377.5"; ID "27292"; transcript_id "transcript91227.chr1.nnic"; exon "4"; exon_id "chr1.22504"; pos "last"	0	0	0	0
chr1	53854851	53855082	-	repeat_id "L2c,chr1,53854851,53855082";repeat_class "LINE";repeat_family "L2";	chr1	53855001	53855051	exon	assembly	-	gene_id "ENSG00000058799.14"; ID "28108"; transcript_id "transcript92985.chr1.nic"; exon "11"; exon_id "chr1.23050"; pos "mid"	11.2695	1.52565	86.199	70.9895
chr1	53854851	53855082	-	repeat_id "L2c,chr1,53854851,53855082";repeat_class "LINE";repeat_family "L2";	chr1	53855001	53855051	exon	assembly	-	gene_id "ENSG00000058799.14"; ID "28143"; transcript_id "ENST00000464950.6"; exon "10"; exon_id "chr1.23050"; pos "mid"	11.2695	1.52565	86.199	70.9895
chr1	54196182	54196491	-	repeat_id "AluJr,chr1,54196182,54196491";repeat_class "SINE";repeat_family "Alu";	chr1	54196369	54196491	exon	assembly	-	gene_id "ENSG00000215883.10"; ID "28315"; transcript_id "transcript94140.chr1.nic"; exon "2"; exon_id "chr1.23201"; pos "mid"	0	0	86.199	0
chr1	54196182	54196491	-	repeat_id "AluJr,chr1,54196182,54196491";repeat_class "SINE";repeat_family "Alu";	chr1	54196369	54196491	exon	assembly	-	gene_id "ENSG00000215883.10"; ID "28328"; transcript_id "transcript94198.chr1.nic"; exon "2"; exon_id "chr1.23201"; pos "mid"	0	0	86.199	0
chr1	58714794	58715185	+	repeat_id "LTR16E2,chr1,58714794,58715185";repeat_class "LTR";repeat_family "ERVL";	chr1	58714832	58714949	exon	assembly	+	gene_id "ENSG00000283445.1"; ID "29088"; transcript_id "transcript95700.chr1.nnic"; exon "2"; exon_id "chr1.24101"; pos "mid"	0	0	0	0
chr1	58715406	58715881	+	repeat_id "Tigger20a,chr1,58715406,58715881";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr1	58715494	58715734	exon	assembly	+	gene_id "ENSG00000283445.1"; ID "29089"; transcript_id "transcript95700.chr1.nnic"; exon "3"; exon_id "chr1.24102"; pos "last"	0	19.3249	0	0
chr1	59673047	59673549	-	repeat_id "L2a,chr1,59673047,59673549";repeat_class "LINE";repeat_family "L2";	chr1	59673067	59673173	exon	assembly	+	gene_id "ENSG00000172456.17"; ID "29489"; transcript_id "transcript96287.chr1.nnic"; exon "1"; exon_id "chr1.24367"; pos "first"	0	0	0	0
chr1	63447393	63447653	-	repeat_id "L2c,chr1,63447393,63447653";repeat_class "LINE";repeat_family "L2";	chr1	63447565	63447614	exon	assembly	-	gene_id "ENSG00000142856.16"; ID "30329"; transcript_id "transcript98345.chr1.nnic"; exon "7"; exon_id "chr1.25192"; pos "mid"	4.098	18.8163	0	0
chr1	63447393	63447653	-	repeat_id "L2c,chr1,63447393,63447653";repeat_class "LINE";repeat_family "L2";	chr1	63447565	63447614	exon	assembly	-	gene_id "ENSG00000142856.16"; ID "30376"; transcript_id "ENST00000489099.5"; exon "8"; exon_id "chr1.25192"; pos "mid"	4.098	18.8163	0	0
chr1	63509913	63510215	+	repeat_id "AluSp,chr1,63509913,63510215";repeat_class "SINE";repeat_family "Alu";	chr1	63510065	63510181	exon	assembly	-	gene_id "ENSG00000142856.16"; ID "30390"; transcript_id "ENST00000371092.7"; exon "2"; exon_id "chr1.25206"; pos "mid"	0	0	18.7869	0
chr1	68367577	68367879	+	repeat_id "AluJb,chr1,68367577,68367879";repeat_class "SINE";repeat_family "Alu";	chr1	68367598	68367690	exon	assembly	-	gene_id "ENSG00000237622.1"; ID "31954"; transcript_id "transcript103543.chr1.nnic"; exon "2"; exon_id "chr1.26278"; pos "mid"	0	0	0	0
chr1	68386440	68389684	+	repeat_id "HERVH-int,chr1,68386440,68389684";repeat_class "LTR";repeat_family "ERV1";	chr1	68386194	68388816	exon	assembly	+	gene_id "ENSG00000233589.1"; ID "31976"; transcript_id "transcript102693.chr1.nnic"; exon "1"; exon_id "chr1.26281"; pos "first"	1174.07	17.2907	1092.96	0
chr1	68386440	68389684	+	repeat_id "HERVH-int,chr1,68386440,68389684";repeat_class "LTR";repeat_family "ERV1";	chr1	68386194	68388816	exon	assembly	+	gene_id "novel_gene_chr1_102732"; ID "31966"; transcript_id "transcript102731.chr1.nnic"; exon "1"; exon_id "chr1.26281"; pos "first"	1174.07	17.2907	1092.96	0
chr1	68386440	68389684	+	repeat_id "HERVH-int,chr1,68386440,68389684";repeat_class "LTR";repeat_family "ERV1";	chr1	68386194	68388816	exon	assembly	+	gene_id "novel_gene_chr1_102916"; ID "31960"; transcript_id "transcript102915.chr1.nnic"; exon "1"; exon_id "chr1.26281"; pos "first"	1174.07	17.2907	1092.96	0
chr1	70366448	70366861	-	repeat_id "MER41B,chr1,70366448,70366861";repeat_class "LTR";repeat_family "ERV1";	chr1	70366444	70366537	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32500"; transcript_id "transcript105085.chr1.nic"; exon "2"; exon_id "chr1.26594"; pos "mid"	9.22041	12.2052	16.5767	0
chr1	70366448	70366861	-	repeat_id "MER41B,chr1,70366448,70366861";repeat_class "LTR";repeat_family "ERV1";	chr1	70366444	70366537	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32515"; transcript_id "ENST00000359875.9"; exon "2"; exon_id "chr1.26594"; pos "mid"	9.22041	12.2052	16.5767	0
chr1	70366448	70366861	-	repeat_id "MER41B,chr1,70366448,70366861";repeat_class "LTR";repeat_family "ERV1";	chr1	70366444	70366537	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32519"; transcript_id "ENST00000463058.5"; exon "2"; exon_id "chr1.26594"; pos "mid"	9.22041	12.2052	16.5767	0
chr1	70366448	70366861	-	repeat_id "MER41B,chr1,70366448,70366861";repeat_class "LTR";repeat_family "ERV1";	chr1	70366444	70366537	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32524"; transcript_id "ENST00000370940.5"; exon "2"; exon_id "chr1.26594"; pos "mid"	9.22041	12.2052	16.5767	0
chr1	70366862	70367359	-	repeat_id "LTR10F,chr1,70366862,70367359";repeat_class "LTR";repeat_family "ERV1";	chr1	70366933	70366984	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32501"; transcript_id "transcript105085.chr1.nic"; exon "3"; exon_id "chr1.26597"; pos "mid"	19.9778	0	0	0
chr1	70366862	70367359	-	repeat_id "LTR10F,chr1,70366862,70367359";repeat_class "LTR";repeat_family "ERV1";	chr1	70366933	70366984	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32520"; transcript_id "ENST00000463058.5"; exon "3"; exon_id "chr1.26597"; pos "mid"	19.9778	0	0	0
chr1	70367629	70368061	+	repeat_id "LTR7,chr1,70367629,70368061";repeat_class "LTR";repeat_family "ERV1";	chr1	70367617	70368021	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32525"; transcript_id "ENST00000370940.5"; exon "3"; exon_id "chr1.26603"; pos "last"	12.2939	0	0	0
chr1	70367629	70368061	+	repeat_id "LTR7,chr1,70367629,70368061";repeat_class "LTR";repeat_family "ERV1";	chr1	70367617	70368023	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32502"; transcript_id "transcript105085.chr1.nic"; exon "4"; exon_id "chr1.26595"; pos "last"	12.2939	0	0	0
chr1	70367629	70368061	+	repeat_id "LTR7,chr1,70367629,70368061";repeat_class "LTR";repeat_family "ERV1";	chr1	70367617	70368023	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32516"; transcript_id "ENST00000359875.9"; exon "3"; exon_id "chr1.26595"; pos "last"	12.2939	0	0	0
chr1	70367629	70368061	+	repeat_id "LTR7,chr1,70367629,70368061";repeat_class "LTR";repeat_family "ERV1";	chr1	70367617	70368023	exon	assembly	+	gene_id "ENSG00000197568.13"; ID "32521"; transcript_id "ENST00000463058.5"; exon "4"; exon_id "chr1.26595"; pos "last"	12.2939	0	0	0
chr1	71065549	71065808	+	repeat_id "Plat_L3,chr1,71065549,71065808";repeat_class "LINE";repeat_family "CR1";	chr1	71065678	71065752	exon	assembly	-	gene_id "ENSG00000132485.13"; ID "32605"; transcript_id "ENST00000254821.10"; exon "10"; exon_id "chr1.26696"; pos "mid"	265.344	305.637	188.974	78.8772
chr1	74201757	74201904	-	repeat_id "L1PA10,chr1,74201757,74201904";repeat_class "LINE";repeat_family "L1";	chr1	74201776	74201856	exon	assembly	+	gene_id "ENSG00000259030.6"; ID "32789"; transcript_id "transcript105905.chr1.nnic"; exon "4"; exon_id "chr1.26913"; pos "mid"	0	0	0	0
chr1	77744860	77745606	-	repeat_id "L1P1,chr1,77744860,77745606";repeat_class "LINE";repeat_family "L1";	chr1	77745421	77745599	exon	assembly	-	gene_id "ENSG00000077254.14"; ID "33491"; transcript_id "ENST00000370793.5"; exon "2"; exon_id "chr1.27476"; pos "mid"	8.70825	0	0	0
chr1	77744860	77745606	-	repeat_id "L1P1,chr1,77744860,77745606";repeat_class "LINE";repeat_family "L1";	chr1	77745421	77745599	exon	assembly	-	gene_id "ENSG00000077254.14"; ID "33520"; transcript_id "ENST00000370792.7"; exon "2"; exon_id "chr1.27476"; pos "mid"	8.70825	0	0	0
chr1	88979423	88980324	+	repeat_id "L1ME2,chr1,88979423,88980324";repeat_class "LINE";repeat_family "L1";	chr1	88979456	88980249	exon	assembly	-	gene_id "ENSG00000213516.9"; ID "35758"; transcript_id "transcript114599.chr1.nnic"; exon "3"; exon_id "chr1.29143"; pos "last"	0	0	0	32.5367
chr1	89127019	89128609	-	repeat_id "LTR12C,chr1,89127019,89128609";repeat_class "LTR";repeat_family "ERV1";	chr1	89128110	89128644	exon	assembly	+	gene_id "novel_gene_chr1_114938"; ID "35857"; transcript_id "transcript114937.chr1.nnic"; exon "1"; exon_id "chr1.29237"; pos "first"	0	0	0	0
chr1	89549904	89550019	+	repeat_id "L2d2,chr1,89549904,89550019";repeat_class "LINE";repeat_family "L2";	chr1	89549915	89549971	exon	assembly	+	gene_id "ENSG00000197147.13"; ID "35923"; transcript_id "ENST00000640258.1"; exon "3"; exon_id "chr1.29340"; pos "mid"	0	0	0	0
chr1	89549904	89550019	+	repeat_id "L2d2,chr1,89549904,89550019";repeat_class "LINE";repeat_family "L2";	chr1	89549915	89549971	exon	assembly	+	gene_id "ENSG00000197147.13"; ID "35932"; transcript_id "transcript115025.chr1.nnic"; exon "2"; exon_id "chr1.29340"; pos "mid"	0	0	0	0
chr1	89558631	89558975	-	repeat_id "MLT1A1,chr1,89558631,89558975";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	89558711	89559036	exon	assembly	+	gene_id "ENSG00000197147.13"; ID "35924"; transcript_id "ENST00000640258.1"; exon "4"; exon_id "chr1.29341"; pos "mid"	0	0	0	0
chr1	93767241	93767540	+	repeat_id "AluJb,chr1,93767241,93767540";repeat_class "SINE";repeat_family "Alu";	chr1	93767236	93767355	exon	assembly	-	gene_id "ENSG00000137936.16"; ID "37360"; transcript_id "transcript119737.chr1.nnic"; exon "2"; exon_id "chr1.30365"; pos "mid"	0	0	0	0
chr1	100267419	100267812	-	repeat_id "MLT1B,chr1,100267419,100267812";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	100267500	100267538	exon	assembly	+	gene_id "ENSG00000137996.12"; ID "39136"; transcript_id "ENST00000260563.4"; exon "3"; exon_id "chr1.31587"; pos "mid"	0	37.1241	11.0511	0
chr1	108875210	108875440	-	repeat_id "MIRb,chr1,108875210,108875440";repeat_class "SINE";repeat_family "MIR";	chr1	108875350	108875382	exon	assembly	+	gene_id "ENSG00000121957.12"; ID "39973"; transcript_id "ENST00000406462.6"; exon "1"; exon_id "chr1.32628"; pos "first"	0	0	0	0
chr1	109409906	109410006	-	repeat_id "MamRTE1,chr1,109409906,109410006";repeat_class "LINE";repeat_family "RTE-BovB";	chr1	109409928	109410014	exon	assembly	-	gene_id "ENSG00000143106.12"; ID "40542"; transcript_id "transcript130226.chr1.nnic"; exon "8"; exon_id "chr1.33003"; pos "mid"	229.999	31.0214	62.9914	0
chr1	109409906	109410006	-	repeat_id "MamRTE1,chr1,109409906,109410006";repeat_class "LINE";repeat_family "RTE-BovB";	chr1	109409928	109410014	exon	assembly	-	gene_id "ENSG00000143106.12"; ID "40552"; transcript_id "ENST00000271308.8"; exon "8"; exon_id "chr1.33003"; pos "mid"	229.999	31.0214	62.9914	0
chr1	109740800	109741063	+	repeat_id "L2d2,chr1,109740800,109741063";repeat_class "LINE";repeat_family "L2";	chr1	109740953	109741038	exon	assembly	-	gene_id "ENSG00000134202.10"; ID "40806"; transcript_id "ENST00000361066.6"; exon "1"; exon_id "chr1.33337"; pos "first"	0	0	0	0
chr1	110318693	110318910	+	repeat_id "AluJb,chr1,110318693,110318910";repeat_class "SINE";repeat_family "Alu";	chr1	110318765	110318882	exon	assembly	-	gene_id "ENSG00000227963.1"; ID "40998"; transcript_id "transcript131297.chr1.nnic"; exon "3"; exon_id "chr1.33533"; pos "mid"	0	0	0	0
chr1	110318693	110318910	+	repeat_id "AluJb,chr1,110318693,110318910";repeat_class "SINE";repeat_family "Alu";	chr1	110318765	110318882	exon	assembly	-	gene_id "ENSG00000227963.1"; ID "41002"; transcript_id "transcript131382.chr1.nnic"; exon "2"; exon_id "chr1.33533"; pos "mid"	0	0	0	0
chr1	110331008	110331175	+	repeat_id "AluSq2,chr1,110331008,110331175";repeat_class "SINE";repeat_family "Alu";	chr1	110331034	110331146	exon	assembly	-	gene_id "ENSG00000227963.1"; ID "40997"; transcript_id "transcript131297.chr1.nnic"; exon "2"; exon_id "chr1.33532"; pos "mid"	0	0	12.1562	0
chr1	110407028	110407145	+	repeat_id "L1ME4b,chr1,110407028,110407145";repeat_class "LINE";repeat_family "L1";	chr1	110407033	110407128	exon	assembly	-	gene_id "ENSG00000134248.13"; ID "41140"; transcript_id "ENST00000483260.5"; exon "2"; exon_id "chr1.33580"; pos "mid"	8.70825	0	18.7869	63.1017
chr1	111627348	111627597	-	repeat_id "L1ME4a,chr1,111627348,111627597";repeat_class "LINE";repeat_family "L1";	chr1	111627470	111627563	exon	assembly	+	gene_id "ENSG00000116473.14"; ID "41488"; transcript_id "transcript132835.chr1.nic"; exon "2"; exon_id "chr1.34098"; pos "mid"	0	0	40.8891	0
chr1	112963967	112964059	+	repeat_id "L1PA4,chr1,112963967,112964059";repeat_class "LINE";repeat_family "L1";	chr1	112963972	112964072	exon	assembly	+	gene_id "ENSG00000226419.7"; ID "42171"; transcript_id "ENST00000416193.5"; exon "3"; exon_id "chr1.34579"; pos "last"	0	0	0	0
chr1	116606475	116606737	+	repeat_id "Plat_L3,chr1,116606475,116606737";repeat_class "LINE";repeat_family "CR1";	chr1	116606492	116606551	exon	assembly	-	gene_id "ENSG00000143061.17"; ID "43518"; transcript_id "ENST00000369483.5"; exon "6"; exon_id "chr1.35644"; pos "mid"	0	0	0	0
chr1	145465617	145465780	-	repeat_id "U1,chr1,145465617,145465780";repeat_class "snRNA";repeat_family "snRNA";	chr1	145465617	145465780	exon	assembly	-	gene_id "ENSG00000270722.1"; ID "44918"; transcript_id "ENST00000605806.1"; exon "1"; exon_id "chr1.37083";	13054.1	9167.06	13010.5	16651
chr1	147760318	147760652	+	repeat_id "L2c,chr1,147760318,147760652";repeat_class "LINE";repeat_family "L2";	chr1	147760499	147760606	exon	assembly	-	gene_id "ENSG00000265107.2"; ID "45824"; transcript_id "ENST00000579774.2"; exon "1"; exon_id "chr1.38210"; pos "first"	0	0	0	0
chr1	149101105	149101403	+	repeat_id "AluJb,chr1,149101105,149101403";repeat_class "SINE";repeat_family "Alu";	chr1	149101262	149101379	exon	assembly	-	gene_id "ENSG00000269713.7"; ID "46270"; transcript_id "ENST00000621645.4"; exon "3"; exon_id "chr1.38688"; pos "mid"	0	0	0	0
chr1	149661279	149661576	-	repeat_id "AluSz,chr1,149661279,149661576";repeat_class "SINE";repeat_family "Alu";	chr1	149661302	149661419	exon	assembly	+	gene_id "ENSG00000277147.4"; ID "46556"; transcript_id "ENST00000610578.4"; exon "5"; exon_id "chr1.39024"; pos "mid"	0	0	0	0
chr1	151194901	151195210	+	repeat_id "AluSc8,chr1,151194901,151195210";repeat_class "SINE";repeat_family "Alu";	chr1	151194923	151195256	exon	assembly	-	gene_id "ENSG00000163159.12"; ID "48200"; transcript_id "transcript154518.chr1.nnic"; exon "1"; exon_id "chr1.40222"; pos "first"	0	0	0	0
chr1	151889902	151890204	-	repeat_id "AluSp,chr1,151889902,151890204";repeat_class "SINE";repeat_family "Alu";	chr1	151889983	151890214	exon	assembly	-	gene_id "ENSG00000159445.12"; ID "49101"; transcript_id "ENST00000471464.5"; exon "3"; exon_id "chr1.40994"; pos "mid"	0	0	0	0
chr1	153563419	153563518	+	repeat_id "MIR3,chr1,153563419,153563518";repeat_class "SINE";repeat_family "MIR";	chr1	153563415	153563536	exon	assembly	-	gene_id "ENSG00000196754.10"; ID "49467"; transcript_id "ENST00000368707.4"; exon "3"; exon_id "chr1.41378"; pos "mid"	522.491	0	160.241	0
chr1	154213026	154213321	+	repeat_id "AluSx1,chr1,154213026,154213321";repeat_class "SINE";repeat_family "Alu";	chr1	154213182	154213303	exon	assembly	-	gene_id "ENSG00000143612.19"; ID "50353"; transcript_id "ENST00000470180.2"; exon "5"; exon_id "chr1.42101"; pos "mid"	0	0	0	0
chr1	155647058	155647362	+	repeat_id "AluSq,chr1,155647058,155647362";repeat_class "SINE";repeat_family "Alu";	chr1	155647217	155647339	exon	assembly	-	gene_id "ENSG00000246203.2"; ID "52588"; transcript_id "transcript171918.chr1.nnic"; exon "2"; exon_id "chr1.43495"; pos "mid"	0	0	0	0
chr1	156090422	156090634	-	repeat_id "MIRb,chr1,156090422,156090634";repeat_class "SINE";repeat_family "MIR";	chr1	156090471	156090582	exon	assembly	+	gene_id "ENSG00000160789.19"; ID "53381"; transcript_id "ENST00000368301.6"; exon "3"; exon_id "chr1.44091"; pos "mid"	0	0	0	0
chr1	158146569	158147206	-	repeat_id "MER70B,chr1,158146569,158147206";repeat_class "LTR";repeat_family "ERVL";	chr1	158146767	158146947	exon	assembly	-	gene_id "ENSG00000231666.6"; ID "54602"; transcript_id "transcript178642.chr1.nnic"; exon "1"; exon_id "chr1.45357"; pos "first"	16.9043	0	36.4686	0
chr1	159965369	159965642	-	repeat_id "MamRep605,chr1,159965369,159965642";repeat_class "LTR?";repeat_family "LTR?";	chr1	159965499	159965645	exon	assembly	+	gene_id "ENSG00000224259.6"; ID "54944"; transcript_id "ENST00000443364.6"; exon "2"; exon_id "chr1.45859"; pos "mid"	0	0	0	0
chr1	163773366	163773583	+	repeat_id "L2c,chr1,163773366,163773583";repeat_class "LINE";repeat_family "L2";	chr1	163773471	163773610	exon	assembly	-	gene_id "ENSG00000228289.1"; ID "56724"; transcript_id "transcript186321.chr1.nnic"; exon "3"; exon_id "chr1.47733"; pos "mid"	0	0	0	0
chr1	163870286	163870673	-	repeat_id "MSTA,chr1,163870286,163870673";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	163870368	163870508	exon	assembly	-	gene_id "ENSG00000228289.1"; ID "56723"; transcript_id "transcript186321.chr1.nnic"; exon "2"; exon_id "chr1.47732"; pos "mid"	0	0	0	0
chr1	171727270	171727999	+	repeat_id "L1ME1,chr1,171727270,171727999";repeat_class "LINE";repeat_family "L1";	chr1	171727578	171728082	exon	assembly	-	gene_id "ENSG00000117533.14"; ID "58502"; transcript_id "transcript191847.chr1.nnic"; exon "4"; exon_id "chr1.49389"; pos "last"	0	0	0	0
chr1	173806304	173806609	+	repeat_id "AluJb,chr1,173806304,173806609";repeat_class "SINE";repeat_family "Alu";	chr1	173806439	173806576	exon	assembly	-	gene_id "ENSG00000120334.15"; ID "58910"; transcript_id "ENST00000356198.6"; exon "5"; exon_id "chr1.49679"; pos "mid"	0	0	0	0
chr1	175177550	175177679	+	repeat_id "MIRc,chr1,175177550,175177679";repeat_class "SINE";repeat_family "MIR";	chr1	175177611	175177684	exon	assembly	-	gene_id "ENSG00000235750.9"; ID "59705"; transcript_id "ENST00000423313.5"; exon "2"; exon_id "chr1.50182"; pos "mid"	39.443	0	0	0
chr1	178024289	178024654	+	repeat_id "THE1C,chr1,178024289,178024654";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	178024404	178024486	exon	assembly	-	gene_id "ENSG00000242193.10"; ID "60048"; transcript_id "ENST00000476232.6"; exon "8"; exon_id "chr1.50514"; pos "mid"	0	0	0	0
chr1	178812929	178813232	-	repeat_id "AluSz,chr1,178812929,178813232";repeat_class "SINE";repeat_family "Alu";	chr1	178812954	178813271	exon	assembly	+	gene_id "ENSG00000116191.17"; ID "60430"; transcript_id "transcript196906.chr1.nnic"; exon "7"; exon_id "chr1.50741"; pos "last"	0	0	0	0
chr1	179133232	179133669	+	repeat_id "L2c,chr1,179133232,179133669";repeat_class "LINE";repeat_family "L2";	chr1	179133312	179133374	exon	assembly	-	gene_id "ENSG00000143322.19"; ID "60636"; transcript_id "ENST00000512653.5"; exon "2"; exon_id "chr1.50837"; pos "mid"	0	69.1623	0	70.0032
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60882"; transcript_id "ENST00000609928.5"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60890"; transcript_id "ENST00000367612.7"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60902"; transcript_id "transcript198431.chr1.nnic"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60907"; transcript_id "transcript198432.chr1.nnic"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60920"; transcript_id "ENST00000482587.5"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	179877259	179877566	+	repeat_id "AluJr,chr1,179877259,179877566";repeat_class "SINE";repeat_family "Alu";	chr1	179877239	179877373	exon	assembly	-	gene_id "ENSG00000169905.12"; ID "60924"; transcript_id "transcript198632.chr1.nnic"; exon "2"; exon_id "chr1.51055"; pos "mid"	398.016	99.1667	0	100.568
chr1	184095683	184095888	+	repeat_id "MLT1B,chr1,184095683,184095888";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	184095690	184095842	exon	assembly	+	gene_id "ENSG00000198860.11"; ID "62335"; transcript_id "transcript202451.chr1.nnic"; exon "5"; exon_id "chr1.52194"; pos "last"	16.9043	40.6836	0	0
chr1	184095683	184095888	+	repeat_id "MLT1B,chr1,184095683,184095888";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	184095690	184095842	exon	assembly	+	gene_id "ENSG00000198860.11"; ID "62346"; transcript_id "transcript202524.chr1.nnic"; exon "4"; exon_id "chr1.52194"; pos "last"	16.9043	40.6836	0	0
chr1	193027841	193027982	+	repeat_id "AluJb,chr1,193027841,193027982";repeat_class "SINE";repeat_family "Alu";	chr1	193027875	193027955	exon	assembly	-	gene_id "ENSG00000116750.13"; ID "63293"; transcript_id "ENST00000367451.8"; exon "8"; exon_id "chr1.52977"; pos "mid"	18.9533	0	0	0
chr1	196701023	196701524	+	repeat_id "HUERS-P1-int,chr1,196701023,196701524";repeat_class "LTR";repeat_family "ERV1";	chr1	196701318	196701566	exon	assembly	+	gene_id "ENSG00000000971.15"; ID "63586"; transcript_id "ENST00000630130.2"; exon "10"; exon_id "chr1.53180"; pos "last"	0	0	0	0
chr1	202766224	202766522	+	repeat_id "AluSc8,chr1,202766224,202766522";repeat_class "SINE";repeat_family "Alu";	chr1	202766397	202766504	exon	assembly	-	gene_id "ENSG00000117139.16"; ID "65741"; transcript_id "ENST00000367264.6"; exon "6"; exon_id "chr1.55018"; pos "mid"	0	0	0	0
chr1	207340354	207340666	-	repeat_id "AluJr,chr1,207340354,207340666";repeat_class "SINE";repeat_family "Alu";	chr1	207340391	207340508	exon	assembly	+	gene_id "ENSG00000196352.14"; ID "67810"; transcript_id "ENST00000314754.12"; exon "10"; exon_id "chr1.57071"; pos "mid"	0	38.6494	0	32.5367
chr1	209428998	209429295	-	repeat_id "AluJb,chr1,209428998,209429295";repeat_class "SINE";repeat_family "Alu";	chr1	209429011	209429088	exon	assembly	+	gene_id "ENSG00000230937.11"; ID "68282"; transcript_id "ENST00000366437.7"; exon "1"; exon_id "chr1.57460"; pos "first"	2514.62	46.278	1253.2	0
chr1	210374156	210374268	-	repeat_id "U5,chr1,210374156,210374268";repeat_class "snRNA";repeat_family "snRNA";	chr1	210374154	210374267	exon	assembly	-	gene_id "ENSG00000200972.1"; ID "68726"; transcript_id "ENST00000364102.1"; exon "1"; exon_id "chr1.57782";	5649.56	1039.98	9271.91	3772.3
chr1	213001235	213002635	-	repeat_id "Tigger1,chr1,213001235,213002635";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr1	213001406	213001782	exon	assembly	-	gene_id "ENSG00000174606.13"; ID "69754"; transcript_id "transcript219490.chr1.nnic"; exon "1"; exon_id "chr1.58470"; pos "first"	0	33.5643	0	0
chr1	213001235	213002635	-	repeat_id "Tigger1,chr1,213001235,213002635";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr1	213001406	213002940	exon	assembly	-	gene_id "ENSG00000174606.13"; ID "69748"; transcript_id "transcript219477.chr1.nnic"; exon "1"; exon_id "chr1.58465"; pos "first"	0	33.5643	0	0
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837066	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71720"; transcript_id "ENST00000457636.5"; exon "4"; exon_id "chr1.59945"; pos "mid"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837382	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71710"; transcript_id "ENST00000435378.5"; exon "5"; exon_id "chr1.59951"; pos "last"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837384	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71695"; transcript_id "transcript224620.chr1.nic"; exon "4"; exon_id "chr1.59944"; pos "last"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837384	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71700"; transcript_id "transcript224632.chr1.nnic"; exon "4"; exon_id "chr1.59944"; pos "last"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837384	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71704"; transcript_id "ENST00000450784.5"; exon "3"; exon_id "chr1.59944"; pos "last"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222836996	222837384	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71725"; transcript_id "ENST00000442171.5"; exon "3"; exon_id "chr1.59944"; pos "last"	0	17.2907	43.0993	53.2421
chr1	222836940	222837432	+	repeat_id "MLT1J,chr1,222836940,222837432";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	222837219	222837383	exon	assembly	+	gene_id "ENSG00000228106.5"; ID "71721"; transcript_id "ENST00000457636.5"; exon "5"; exon_id "chr1.59954"; pos "last"	0	17.2907	43.0993	53.2421
chr1	224301549	224301828	+	repeat_id "AluJb,chr1,224301549,224301828";repeat_class "SINE";repeat_family "Alu";	chr1	224301691	224301771	exon	assembly	-	gene_id "ENSG00000143748.17"; ID "72147"; transcript_id "ENST00000482491.5"; exon "10"; exon_id "chr1.60319"; pos "mid"	0	18.8163	0	0
chr1	224448959	224449263	-	repeat_id "AluSc8,chr1,224448959,224449263";repeat_class "SINE";repeat_family "Alu";	chr1	224449084	224449137	exon	assembly	-	gene_id "novel_gene_chr1_226983"; ID "72500"; transcript_id "transcript226982.chr1.nnic"; exon "2"; exon_id "chr1.60467"; pos "mid"	0	0	0	0
chr1	224969626	224970700	+	repeat_id "MER11B,chr1,224969626,224970700";repeat_class "LTR";repeat_family "ERVK";	chr1	224969634	224969829	exon	assembly	+	gene_id "ENSG00000185842.15"; ID "72628"; transcript_id "transcript227210.chr1.nic"; exon "8"; exon_id "chr1.60673"; pos "last"	0	0	0	0
chr1	225716020	225716448	+	repeat_id "LTR16A,chr1,225716020,225716448";repeat_class "LTR";repeat_family "ERVL";	chr1	225716046	225716413	exon	assembly	+	gene_id "ENSG00000227496.1"; ID "72948"; transcript_id "transcript227891.chr1.nnic"; exon "3"; exon_id "chr1.60823"; pos "last"	0	0	0	0
chr1	225786846	225787132	-	repeat_id "AluJr,chr1,225786846,225787132";repeat_class "SINE";repeat_family "Alu";	chr1	225786862	225786985	exon	assembly	+	gene_id "ENSG00000143742.12"; ID "72961"; transcript_id "ENST00000366839.8"; exon "3"; exon_id "chr1.60830"; pos "mid"	0	50.3461	0	34.5086
chr1	228628146	228628266	-	repeat_id "5S,chr1,228628146,228628266";repeat_class "rRNA";repeat_family "rRNA";	chr1	228628148	228628266	exon	assembly	-	gene_id "ENSG00000201321.1"; ID "74446"; transcript_id "ENST00000364451.1"; exon "1"; exon_id "chr1.62040";	20.49	55.4316	419.943	226.772
chr1	231522414	231522862	-	repeat_id "MLT1H2,chr1,231522414,231522862";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	231522461	231522637	exon	assembly	-	gene_id "ENSG00000233461.5"; ID "75409"; transcript_id "ENST00000450783.5"; exon "3"; exon_id "chr1.62699"; pos "last"	0	36.6154	0	0
chr1	235109301	235110109	-	repeat_id "Tigger10,chr1,235109301,235110109";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr1	235109341	235110299	exon	assembly	-	gene_id "ENSG00000173726.10"; ID "76191"; transcript_id "transcript236081.chr1.nnic"; exon "6"; exon_id "chr1.63299"; pos "last"	0	0	0	33.5226
chr1	235496030	235496325	+	repeat_id "AluSp,chr1,235496030,235496325";repeat_class "SINE";repeat_family "Alu";	chr1	235496186	235496308	exon	assembly	-	gene_id "ENSG00000162885.12"; ID "76509"; transcript_id "transcript237399.chr1.nic"; exon "2"; exon_id "chr1.63474"; pos "mid"	18.441	36.6152	0	0
chr1	238485818	238486145	-	repeat_id "MER61A,chr1,238485818,238486145";repeat_class "LTR";repeat_family "ERV1";	chr1	238485785	238486023	exon	assembly	-	gene_id "ENSG00000215808.2"; ID "77339"; transcript_id "ENST00000400946.2"; exon "1"; exon_id "chr1.64190"; pos "first"	50.7124	46.2778	0	0
chr1	241420475	241420783	-	repeat_id "AluSz,chr1,241420475,241420783";repeat_class "SINE";repeat_family "Alu";	chr1	241420508	241420625	exon	assembly	+	gene_id "ENSG00000225554.1"; ID "77625"; transcript_id "transcript239130.chr1.nnic"; exon "2"; exon_id "chr1.64400"; pos "mid"	0	0	0	0
chr1	241433042	241433568	+	repeat_id "MER34,chr1,241433042,241433568";repeat_class "LTR";repeat_family "ERV1";	chr1	241433169	241433389	exon	assembly	+	gene_id "ENSG00000225554.1"; ID "77629"; transcript_id "transcript239135.chr1.nnic"; exon "2"; exon_id "chr1.64403"; pos "mid"	0	17.2907	0	0
chr1	246967613	246967994	-	repeat_id "MSTA,chr1,246967613,246967994";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	246967695	246967792	exon	assembly	-	gene_id "ENSG00000197472.14"; ID "79286"; transcript_id "ENST00000479214.5"; exon "5"; exon_id "chr1.65594"; pos "mid"	0	0	0	0
chr1	246967613	246967994	-	repeat_id "MSTA,chr1,246967613,246967994";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr1	246967695	246967792	exon	assembly	-	gene_id "ENSG00000197472.14"; ID "79299"; transcript_id "ENST00000487338.6"; exon "5"; exon_id "chr1.65594"; pos "mid"	0	0	0	0
chr1	248856519	248856593	+	repeat_id "L3,chr1,248856519,248856593";repeat_class "LINE";repeat_family "CR1";	chr1	248856514	248856562	exon	assembly	-	gene_id "ENSG00000171163.15"; ID "79717"; transcript_id "ENST00000306601.8"; exon "5"; exon_id "chr1.66093"; pos "mid"	8.70821	25.4275	48.6251	20.7052
chr10	4657323	4658496	-	repeat_id "Tigger3b,chr10,4657323,4658496";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr10	4657601	4657725	exon	assembly	-	gene_id "ENSG00000231298.6"; ID "414265"; transcript_id "ENST00000430998.6"; exon "3"; exon_id "chr10.671"; pos "mid"	0	53.906	0	0
chr10	5924570	5924865	-	repeat_id "AluSx1,chr10,5924570,5924865";repeat_class "SINE";repeat_family "Alu";	chr10	5924751	5924801	exon	assembly	+	gene_id "ENSG00000134452.19"; ID "414793"; transcript_id "ENST00000397269.7"; exon "18"; exon_id "chr10.1140"; pos "mid"	0	0	0	0
chr10	5932706	5933016	-	repeat_id "AluJb,chr10,5932706,5933016";repeat_class "SINE";repeat_family "Alu";	chr10	5932675	5932860	exon	assembly	+	gene_id "ENSG00000134452.19"; ID "414820"; transcript_id "transcript4275.chr10.nnic"; exon "1"; exon_id "chr10.1147"; pos "first"	0	0	0	0
chr10	6779102	6779181	+	repeat_id "L2c,chr10,6779102,6779181";repeat_class "LINE";repeat_family "L2";	chr10	6779111	6779180	exon	assembly	-	gene_id "ENSG00000281186.1"; ID "415234"; transcript_id "ENST00000628989.1"; exon "1"; exon_id "chr10.1476"; pos "first"	0	0	0	0
chr10	6779420	6779969	+	repeat_id "MLT2A2,chr10,6779420,6779969";repeat_class "LTR";repeat_family "ERVL";	chr10	6779598	6779887	exon	assembly	+	gene_id "ENSG00000238266.1"; ID "415238"; transcript_id "ENST00000436383.1"; exon "1"; exon_id "chr10.1478"; pos "first"	88.1065	314.79	36.4686	162.684
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784437	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415562"; transcript_id "ENST00000602763.5"; exon "4"; exon_id "chr10.1769"; pos "last"	0	0	0	0
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784437	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415567"; transcript_id "transcript6858.chr10.nic"; exon "4"; exon_id "chr10.1769"; pos "last"	0	0	0	0
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784437	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415571"; transcript_id "transcript6892.chr10.nnic"; exon "3"; exon_id "chr10.1769"; pos "last"	0	0	0	0
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784437	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415580"; transcript_id "ENST00000415590.6"; exon "4"; exon_id "chr10.1769"; pos "last"	0	0	0	0
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784438	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415575"; transcript_id "ENST00000434919.6"; exon "3"; exon_id "chr10.1774"; pos "last"	0	0	0	0
chr10	10784117	10784863	-	repeat_id "LTR1B,chr10,10784117,10784863";repeat_class "LTR";repeat_family "ERV1";	chr10	10784439	10784669	exon	assembly	-	gene_id "ENSG00000225383.7"; ID "415557"; transcript_id "ENST00000446372.2"; exon "4"; exon_id "chr10.1767"; pos "last"	0	0	0	0
chr10	15102195	15102485	-	repeat_id "AluJb,chr10,15102195,15102485";repeat_class "SINE";repeat_family "Alu";	chr10	15102218	15102336	exon	assembly	+	gene_id "ENSG00000152464.14"; ID "417183"; transcript_id "ENST00000378203.5"; exon "2"; exon_id "chr10.2949"; pos "mid"	94.2536	55.9402	0	131.133
chr10	15102195	15102485	-	repeat_id "AluJb,chr10,15102195,15102485";repeat_class "SINE";repeat_family "Alu";	chr10	15102218	15102336	exon	assembly	+	gene_id "ENSG00000152464.14"; ID "417198"; transcript_id "ENST00000378197.4"; exon "2"; exon_id "chr10.2949"; pos "mid"	94.2536	55.9402	0	131.133
chr10	16437335	16437622	-	repeat_id "AluJb,chr10,16437335,16437622";repeat_class "SINE";repeat_family "Alu";	chr10	16437357	16437490	exon	assembly	+	gene_id "ENSG00000165983.14"; ID "417388"; transcript_id "ENST00000378000.5"; exon "2"; exon_id "chr10.3130"; pos "mid"	37.9064	38.1411	0	86.7649
chr10	16590641	16590916	-	repeat_id "L1ME4a,chr10,16590641,16590916";repeat_class "LINE";repeat_family "L1";	chr10	16590611	16590925	exon	assembly	-	gene_id "ENSG00000148484.17"; ID "417450"; transcript_id "transcript12237.chr10.nnic"; exon "10"; exon_id "chr10.3174"; pos "last"	0	0	0	0
chr10	23315978	23317573	-	repeat_id "MER52A,chr10,23315978,23317573";repeat_class "LTR";repeat_family "ERV1";	chr10	23316587	23316912	exon	assembly	-	gene_id "ENSG00000179133.12"; ID "418787"; transcript_id "transcript16879.chr10.nnic"; exon "5"; exon_id "chr10.4295"; pos "last"	0	0	0	0
chr10	23315978	23317573	-	repeat_id "MER52A,chr10,23315978,23317573";repeat_class "LTR";repeat_family "ERV1";	chr10	23316587	23316912	exon	assembly	-	gene_id "ENSG00000179133.12"; ID "418798"; transcript_id "transcript16884.chr10.nnic"; exon "4"; exon_id "chr10.4295"; pos "last"	0	0	0	0
chr10	26700825	26702320	+	repeat_id "THE1D-int,chr10,26700825,26702320";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr10	26702162	26702194	exon	assembly	+	gene_id "ENSG00000148459.15"; ID "419301"; transcript_id "ENST00000376215.9"; exon "2"; exon_id "chr10.4769"; pos "mid"	18.441	0	79.5683	0
chr10	27079876	27080156	+	repeat_id "AluSx3,chr10,27079876,27080156";repeat_class "SINE";repeat_family "Alu";	chr10	27080032	27080178	exon	assembly	-	gene_id "ENSG00000107890.16"; ID "419452"; transcript_id "ENST00000436985.6"; exon "7"; exon_id "chr10.4873"; pos "mid"	0	0	0	0
chr10	27147530	27148147	+	repeat_id "LTR41,chr10,27147530,27148147";repeat_class "LTR";repeat_family "ERVL";	chr10	27147498	27147668	exon	assembly	-	gene_id "ENSG00000136758.18"; ID "419529"; transcript_id "ENST00000326799.7"; exon "3"; exon_id "chr10.4904"; pos "mid"	17.9288	0	38.6789	0
chr10	27147530	27148147	+	repeat_id "LTR41,chr10,27147530,27148147";repeat_class "LTR";repeat_family "ERVL";	chr10	27147498	27147668	exon	assembly	-	gene_id "ENSG00000136758.18"; ID "419550"; transcript_id "ENST00000375972.7"; exon "3"; exon_id "chr10.4904"; pos "mid"	17.9288	0	38.6789	0
chr10	28525953	28526198	-	repeat_id "L2,chr10,28525953,28526198";repeat_class "LINE";repeat_family "L2";	chr10	28525948	28526008	exon	assembly	-	gene_id "ENSG00000254635.5"; ID "419943"; transcript_id "ENST00000527986.5"; exon "2"; exon_id "chr10.5203"; pos "mid"	54.8104	17.2907	0	155.782
chr10	35320860	35321132	+	repeat_id "AluJo,chr10,35320860,35321132";repeat_class "SINE";repeat_family "Alu";	chr10	35320856	35320998	exon	assembly	-	gene_id "ENSG00000271335.5"; ID "422052"; transcript_id "ENST00000603160.5"; exon "1"; exon_id "chr10.6625"; pos "first"	0	0	0	0
chr10	38412150	38412578	-	repeat_id "MLT1D,chr10,38412150,38412578";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr10	38412228	38412443	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422561"; transcript_id "ENST00000622550.2"; exon "4"; exon_id "chr10.7004"; pos "mid"	0	0	0	0
chr10	38412707	38413007	-	repeat_id "AluSx1,chr10,38412707,38413007";repeat_class "SINE";repeat_family "Alu";	chr10	38412729	38412882	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422562"; transcript_id "ENST00000622550.2"; exon "5"; exon_id "chr10.7005"; pos "mid"	0	0	0	0
chr10	38435117	38435410	-	repeat_id "AluJr,chr10,38435117,38435410";repeat_class "SINE";repeat_family "Alu";	chr10	38435130	38435253	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422568"; transcript_id "ENST00000622550.2"; exon "11"; exon_id "chr10.7011"; pos "mid"	0	0	0	0
chr10	38437070	38437354	-	repeat_id "AluJb,chr10,38437070,38437354";repeat_class "SINE";repeat_family "Alu";	chr10	38437109	38437206	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422569"; transcript_id "ENST00000622550.2"; exon "12"; exon_id "chr10.7012"; pos "mid"	0	0	0	0
chr10	38438864	38439101	-	repeat_id "L2b,chr10,38438864,38439101";repeat_class "LINE";repeat_family "L2";	chr10	38438858	38439026	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422571"; transcript_id "ENST00000622550.2"; exon "14"; exon_id "chr10.7014"; pos "mid"	0	0	0	0
chr10	38444519	38444786	-	repeat_id "AluJr,chr10,38444519,38444786";repeat_class "SINE";repeat_family "Alu";	chr10	38444545	38444663	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422572"; transcript_id "ENST00000622550.2"; exon "15"; exon_id "chr10.7015"; pos "mid"	0	0	0	0
chr10	38445387	38445576	-	repeat_id "AluJb,chr10,38445387,38445576";repeat_class "SINE";repeat_family "Alu";	chr10	38445417	38445607	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422573"; transcript_id "ENST00000622550.2"; exon "16"; exon_id "chr10.7016"; pos "mid"	0	0	0	0
chr10	38447384	38447803	+	repeat_id "MER1A,chr10,38447384,38447803";repeat_class "DNA";repeat_family "hAT-Charlie";	chr10	38447664	38447721	exon	assembly	+	gene_id "ENSG00000276805.2"; ID "422574"; transcript_id "ENST00000622550.2"; exon "17"; exon_id "chr10.7017"; pos "mid"	0	0	0	0
chr10	42487021	42494108	+	repeat_id "HERVK9-int,chr10,42487021,42494108";repeat_class "LTR";repeat_family "ERVK";	chr10	42492080	42492342	exon	assembly	+	gene_id "ENSG00000185904.11"; ID "422656"; transcript_id "ENST00000424751.2"; exon "4"; exon_id "chr10.7111"; pos "mid"	0	74.7565	121.562	147.894
chr10	42487021	42494108	+	repeat_id "HERVK9-int,chr10,42487021,42494108";repeat_class "LTR";repeat_family "ERVK";	chr10	42492080	42492342	exon	assembly	+	gene_id "ENSG00000185904.11"; ID "422662"; transcript_id "transcript26708.chr10.nnic"; exon "4"; exon_id "chr10.7111"; pos "mid"	0	74.7565	121.562	147.894
chr10	42487021	42494108	+	repeat_id "HERVK9-int,chr10,42487021,42494108";repeat_class "LTR";repeat_family "ERVK";	chr10	42492080	42492342	exon	assembly	+	gene_id "ENSG00000185904.11"; ID "422671"; transcript_id "ENST00000429940.6"; exon "4"; exon_id "chr10.7111"; pos "mid"	0	74.7565	121.562	147.894
chr10	45848696	45848944	-	repeat_id "THE1D,chr10,45848696,45848944";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr10	45848843	45848912	exon	assembly	-	gene_id "ENSG00000188234.13"; ID "423399"; transcript_id "transcript28516.chr10.nic"; exon "2"; exon_id "chr10.7799"; pos "mid"	0	0	0	0
chr10	46808728	46809110	-	repeat_id "L2,chr10,46808728,46809110";repeat_class "LINE";repeat_family "L2";	chr10	46808996	46809088	exon	assembly	+	gene_id "ENSG00000204177.10"; ID "423620"; transcript_id "transcript30042.chr10.nnic"; exon "9"; exon_id "chr10.8164"; pos "mid"	0	0	0	31.5507
chr10	47955346	47956491	-	repeat_id "Tigger3b,chr10,47955346,47956491";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr10	47956026	47956164	exon	assembly	-	gene_id "ENSG00000276850.4"; ID "423870"; transcript_id "ENST00000613389.1"; exon "2"; exon_id "chr10.8383"; pos "mid"	0	0	0	0
chr10	47955346	47956491	-	repeat_id "Tigger3b,chr10,47955346,47956491";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr10	47956026	47956168	exon	assembly	-	gene_id "ENSG00000276850.4"; ID "423854"; transcript_id "transcript31162.chr10.nnic"; exon "2"; exon_id "chr10.8373"; pos "mid"	0	0	0	0
chr10	47973833	47974904	-	repeat_id "L1P4,chr10,47973833,47974904";repeat_class "LINE";repeat_family "L1";	chr10	47974383	47974903	exon	assembly	-	gene_id "ENSG00000276850.4"; ID "423862"; transcript_id "transcript31198.chr10.nnic"; exon "2"; exon_id "chr10.8378"; pos "mid"	3.58575	0	0	0
chr10	47985816	47986226	-	repeat_id "L1ME2,chr10,47985816,47986226";repeat_class "LINE";repeat_family "L1";	chr10	47985856	47985966	exon	assembly	-	gene_id "ENSG00000276850.4"; ID "423869"; transcript_id "ENST00000613389.1"; exon "1"; exon_id "chr10.8382"; pos "first"	0	0	0	0
chr10	47985816	47986226	-	repeat_id "L1ME2,chr10,47985816,47986226";repeat_class "LINE";repeat_family "L1";	chr10	47985856	47985987	exon	assembly	-	gene_id "ENSG00000276850.4"; ID "423858"; transcript_id "transcript31163.chr10.nic"; exon "2"; exon_id "chr10.8370"; pos "mid"	0	0	0	0
chr10	49943204	49943518	-	repeat_id "AluJr,chr10,49943204,49943518";repeat_class "SINE";repeat_family "Alu";	chr10	49943235	49943358	exon	assembly	+	gene_id "ENSG00000204152.10"; ID "424405"; transcript_id "ENST00000478381.5"; exon "2"; exon_id "chr10.8961"; pos "mid"	0	0	0	0
chr10	52454704	52455679	+	repeat_id "L2a,chr10,52454704,52455679";repeat_class "LINE";repeat_family "L2";	chr10	52454832	52455366	exon	assembly	-	gene_id "ENSG00000231131.6"; ID "425065"; transcript_id "transcript33686.chr10.nnic"; exon "1"; exon_id "chr10.9415"; pos "first"	69.1534	0	198.92	0
chr10	52454704	52455679	+	repeat_id "L2a,chr10,52454704,52455679";repeat_class "LINE";repeat_family "L2";	chr10	52455106	52455272	exon	assembly	-	gene_id "ENSG00000231131.6"; ID "425069"; transcript_id "ENST00000435813.6"; exon "1"; exon_id "chr10.9418"; pos "first"	69.1534	0	198.92	0
chr10	70162682	70163236	+	repeat_id "Tigger1,chr10,70162682,70163236";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr10	70162690	70162759	exon	assembly	-	gene_id "ENSG00000079332.14"; ID "427990"; transcript_id "ENST00000373242.6"; exon "2"; exon_id "chr10.11519"; pos "mid"	106.035	101.201	79.5683	104.512
chr10	70882314	70882800	-	repeat_id "MLT2B4,chr10,70882314,70882800";repeat_class "LTR";repeat_family "ERVL";	chr10	70882280	70882485	exon	assembly	-	gene_id "ENSG00000166228.8"; ID "428211"; transcript_id "ENST00000493961.5"; exon "3"; exon_id "chr10.11723"; pos "last"	0	0	0	0
chr10	72102693	72102992	+	repeat_id "AluSq2,chr10,72102693,72102992";repeat_class "SINE";repeat_family "Alu";	chr10	72102850	72102967	exon	assembly	-	gene_id "ENSG00000138303.17"; ID "428529"; transcript_id "transcript47086.chr10.nic"; exon "10"; exon_id "chr10.12010"; pos "mid"	27.6612	0	0	0
chr10	72220048	72220353	+	repeat_id "AluSp,chr10,72220048,72220353";repeat_class "SINE";repeat_family "Alu";	chr10	72220054	72220379	exon	assembly	+	gene_id "ENSG00000166295.8"; ID "428576"; transcript_id "ENST00000621663.4"; exon "2"; exon_id "chr10.12021"; pos "mid"	17.4165	19.3249	0	0
chr10	72220048	72220353	+	repeat_id "AluSp,chr10,72220048,72220353";repeat_class "SINE";repeat_family "Alu";	chr10	72220054	72220379	exon	assembly	+	gene_id "ENSG00000166295.8"; ID "428587"; transcript_id "transcript48065.chr10.nic"; exon "2"; exon_id "chr10.12021"; pos "mid"	17.4165	19.3249	0	0
chr10	72861426	72861795	-	repeat_id "AluSz6,chr10,72861426,72861795";repeat_class "SINE";repeat_family "Alu";	chr10	72861679	72861776	exon	assembly	+	gene_id "ENSG00000156026.14"; ID "428796"; transcript_id "ENST00000357157.10"; exon "5"; exon_id "chr10.12221"; pos "mid"	0	0	0	0
chr10	73704964	73705346	+	repeat_id "L2,chr10,73704964,73705346";repeat_class "LINE";repeat_family "L2";	chr10	73704986	73705078	exon	assembly	-	gene_id "ENSG00000242288.9"; ID "429704"; transcript_id "ENST00000399449.3"; exon "11"; exon_id "chr10.12786"; pos "mid"	0	0	0	0
chr10	73742860	73743582	-	repeat_id "LTR8,chr10,73742860,73743582";repeat_class "LTR";repeat_family "ERV1";	chr10	73742964	73743211	exon	assembly	-	gene_id "ENSG00000279088.1"; ID "429783"; transcript_id "transcript53319.chr10.nnic"; exon "3"; exon_id "chr10.12815"; pos "last"	21.5145	8.1368	36.4686	0
chr10	73742860	73743582	-	repeat_id "LTR8,chr10,73742860,73743582";repeat_class "LTR";repeat_family "ERV1";	chr10	73742964	73743211	exon	assembly	-	gene_id "ENSG00000279088.1"; ID "429795"; transcript_id "transcript53322.chr10.nnic"; exon "3"; exon_id "chr10.12815"; pos "last"	21.5145	8.1368	36.4686	0
chr10	73810659	73810894	-	repeat_id "MIR,chr10,73810659,73810894";repeat_class "SINE";repeat_family "MIR";	chr10	73810684	73810903	exon	assembly	-	gene_id "ENSG00000166507.17"; ID "429962"; transcript_id "ENST00000398701.2"; exon "2"; exon_id "chr10.12939"; pos "last"	19.4655	0	15.4715	0
chr10	73810659	73810894	-	repeat_id "MIR,chr10,73810659,73810894";repeat_class "SINE";repeat_family "MIR";	chr10	73810799	73810903	exon	assembly	-	gene_id "ENSG00000166507.17"; ID "429946"; transcript_id "ENST00000309979.10"; exon "2"; exon_id "chr10.12924"; pos "mid"	19.4655	0	15.4715	0
chr10	74138650	74138959	+	repeat_id "AluJo,chr10,74138650,74138959";repeat_class "SINE";repeat_family "Alu";	chr10	74138806	74138931	exon	assembly	-	gene_id "ENSG00000185009.12"; ID "430313"; transcript_id "ENST00000372745.1"; exon "2"; exon_id "chr10.13172"; pos "mid"	96.8148	71.1966	78.4629	67.0456
chr10	77929421	77929889	+	repeat_id "MLT1C2,chr10,77929421,77929889";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr10	77929589	77929824	exon	assembly	+	gene_id "ENSG00000233871.2"; ID "431226"; transcript_id "ENST00000449852.1"; exon "2"; exon_id "chr10.13923"; pos "last"	39.9551	0	0	0
chr10	78040182	78040254	+	repeat_id "MamRTE1,chr10,78040182,78040254";repeat_class "LINE";repeat_family "RTE-BovB";	chr10	78040201	78040225	exon	assembly	+	gene_id "ENSG00000138326.18"; ID "431295"; transcript_id "ENST00000435275.5"; exon "5"; exon_id "chr10.13965"; pos "mid"	101.425	23.3931	0	75.9192
chr10	78040182	78040254	+	repeat_id "MamRTE1,chr10,78040182,78040254";repeat_class "LINE";repeat_family "RTE-BovB";	chr10	78040204	78040225	exon	assembly	+	gene_id "ENSG00000138326.18"; ID "431302"; transcript_id "ENST00000360830.8"; exon "5"; exon_id "chr10.13968"; pos "mid"	101.425	23.3931	0	75.9192
chr10	78040182	78040254	+	repeat_id "MamRTE1,chr10,78040182,78040254";repeat_class "LINE";repeat_family "RTE-BovB";	chr10	78040204	78040225	exon	assembly	+	gene_id "ENSG00000138326.18"; ID "431328"; transcript_id "ENST00000485708.6"; exon "6"; exon_id "chr10.13968"; pos "mid"	101.425	23.3931	0	75.9192
chr10	80176084	80176499	+	repeat_id "L1ME4b,chr10,80176084,80176499";repeat_class "LINE";repeat_family "L1";	chr10	80176107	80176155	exon	assembly	-	gene_id "ENSG00000122359.17"; ID "431639"; transcript_id "ENST00000422982.7"; exon "2"; exon_id "chr10.14474"; pos "mid"	17.9286	37.6324	8.84092	0
chr10	86965667	86966223	-	repeat_id "LTR48B,chr10,86965667,86966223";repeat_class "LTR";repeat_family "ERV1";	chr10	86965740	86966237	exon	assembly	-	gene_id "ENSG00000272734.1"; ID "432334"; transcript_id "transcript61111.chr10.nic"; exon "2"; exon_id "chr10.15108"; pos "last"	133.184	35.0896	36.4686	0
chr10	87208184	87208490	-	repeat_id "AluSx,chr10,87208184,87208490";repeat_class "SINE";repeat_family "Alu";	chr10	87208168	87208512	exon	assembly	-	gene_id "ENSG00000223482.7"; ID "432528"; transcript_id "transcript61380.chr10.nnic"; exon "6"; exon_id "chr10.15227"; pos "last"	0	0	0	0
chr10	87246049	87246263	+	repeat_id "AluJr,chr10,87246049,87246263";repeat_class "SINE";repeat_family "Alu";	chr10	87246115	87246212	exon	assembly	-	gene_id "ENSG00000223482.7"; ID "432527"; transcript_id "transcript61380.chr10.nnic"; exon "5"; exon_id "chr10.15226"; pos "mid"	16.9043	0	0	0
chr10	87246049	87246263	+	repeat_id "AluJr,chr10,87246049,87246263";repeat_class "SINE";repeat_family "Alu";	chr10	87246115	87246212	exon	assembly	-	gene_id "ENSG00000223482.7"; ID "432550"; transcript_id "ENST00000433920.5"; exon "5"; exon_id "chr10.15226"; pos "mid"	16.9043	0	0	0
chr10	89399679	89400080	+	repeat_id "MLT1B,chr10,89399679,89400080";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr10	89399895	89400003	exon	assembly	+	gene_id "ENSG00000185745.9"; ID "433137"; transcript_id "transcript63906.chr10.nnic"; exon "2"; exon_id "chr10.15729"; pos "mid"	0	0	0	0
chr10	90902210	90902525	-	repeat_id "AluSz6,chr10,90902210,90902525";repeat_class "SINE";repeat_family "Alu";	chr10	90902243	90902344	exon	assembly	+	gene_id "ENSG00000148688.13"; ID "433452"; transcript_id "ENST00000489806.5"; exon "6"; exon_id "chr10.15935"; pos "mid"	0	0	0	0
chr10	90903200	90903363	+	repeat_id "Tigger13a,chr10,90903200,90903363";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr10	90903192	90903276	exon	assembly	+	gene_id "ENSG00000148688.13"; ID "433453"; transcript_id "ENST00000489806.5"; exon "7"; exon_id "chr10.15942"; pos "mid"	0	19.3249	41.9942	36.4805
chr10	94609012	94609320	-	repeat_id "AluSp,chr10,94609012,94609320";repeat_class "SINE";repeat_family "Alu";	chr10	94609012	94609166	exon	assembly	+	gene_id "ENSG00000119969.14"; ID "434795"; transcript_id "transcript68714.chr10.nnic"; exon "1"; exon_id "chr10.16953"; pos "first"	0	0	0	0
chr10	98156071	98156278	-	repeat_id "HAL1,chr10,98156071,98156278";repeat_class "LINE";repeat_family "L1";	chr10	98156093	98156147	exon	assembly	+	gene_id "ENSG00000166024.13"; ID "436474"; transcript_id "ENST00000298999.7"; exon "2"; exon_id "chr10.18243"; pos "mid"	50.7124	69.671	72.9376	0
chr10	98162714	98162997	-	repeat_id "AluJb,chr10,98162714,98162997";repeat_class "SINE";repeat_family "Alu";	chr10	98162883	98162975	exon	assembly	+	gene_id "ENSG00000166024.13"; ID "436475"; transcript_id "ENST00000298999.7"; exon "3"; exon_id "chr10.18244"; pos "mid"	0	0	0	0
chr10	100380920	100381305	+	repeat_id "LTR7B,chr10,100380920,100381305";repeat_class "LTR";repeat_family "ERV1";	chr10	100380983	100381109	exon	assembly	+	gene_id "ENSG00000235823.2"; ID "437422"; transcript_id "ENST00000641708.1"; exon "2"; exon_id "chr10.18866"; pos "mid"	12.8063	0	0	0
chr10	100380920	100381305	+	repeat_id "LTR7B,chr10,100380920,100381305";repeat_class "LTR";repeat_family "ERV1";	chr10	100380983	100381109	exon	assembly	+	gene_id "ENSG00000235823.2"; ID "437431"; transcript_id "transcript76946.chr10.nic"; exon "2"; exon_id "chr10.18866"; pos "mid"	12.8063	0	0	0
chr10	100388044	100388398	+	repeat_id "LTR7B,chr10,100388044,100388398";repeat_class "LTR";repeat_family "ERV1";	chr10	100388037	100388360	exon	assembly	+	gene_id "ENSG00000235823.2"; ID "437424"; transcript_id "ENST00000641708.1"; exon "4"; exon_id "chr10.18870"; pos "last"	0	0	79.5683	0
chr10	100388044	100388398	+	repeat_id "LTR7B,chr10,100388044,100388398";repeat_class "LTR";repeat_family "ERV1";	chr10	100388037	100388360	exon	assembly	+	gene_id "ENSG00000235823.2"; ID "437428"; transcript_id "transcript76938.chr10.nic"; exon "3"; exon_id "chr10.18870"; pos "last"	0	0	79.5683	0
chr10	102452044	102452342	-	repeat_id "AluSx,chr10,102452044,102452342";repeat_class "SINE";repeat_family "Alu";	chr10	102452090	102452187	exon	assembly	+	gene_id "ENSG00000269609.5"; ID "439046"; transcript_id "ENST00000492465.2"; exon "4"; exon_id "chr10.20010"; pos "mid"	8.70825	0	0	0
chr10	102716558	102716868	-	repeat_id "AluSp,chr10,102716558,102716868";repeat_class "SINE";repeat_family "Alu";	chr10	102716614	102716711	exon	assembly	+	gene_id "ENSG00000156398.12"; ID "439325"; transcript_id "transcript81636.chr10.nic"; exon "2"; exon_id "chr10.20149"; pos "mid"	0	0	0	0
chr10	102724712	102725438	-	repeat_id "L1MCb,chr10,102724712,102725438";repeat_class "LINE";repeat_family "L1";	chr10	102724936	102724996	exon	assembly	+	gene_id "ENSG00000156398.12"; ID "439311"; transcript_id "transcript81634.chr10.nic"; exon "2"; exon_id "chr10.20146"; pos "mid"	0	0	0	0
chr10	103395616	103395992	+	repeat_id "L4_C_Mam,chr10,103395616,103395992";repeat_class "LINE";repeat_family "RTE-X";	chr10	103395746	103396023	exon	assembly	-	gene_id "ENSG00000173915.14"; ID "439815"; transcript_id "ENST00000369825.5"; exon "1"; exon_id "chr10.20433"; pos "first"	288.907	169.346	237.6	396.357
chr10	103395616	103395992	+	repeat_id "L4_C_Mam,chr10,103395616,103395992";repeat_class "LINE";repeat_family "RTE-X";	chr10	103395746	103396032	exon	assembly	-	gene_id "ENSG00000173915.14"; ID "439822"; transcript_id "ENST00000369815.5"; exon "2"; exon_id "chr10.20437"; pos "mid"	288.907	169.346	237.6	396.357
chr10	103399710	103399988	-	repeat_id "AluSz,chr10,103399710,103399988";repeat_class "SINE";repeat_family "Alu";	chr10	103399734	103399830	exon	assembly	+	gene_id "ENSG00000148843.13"; ID "439846"; transcript_id "transcript83207.chr10.nnic"; exon "3"; exon_id "chr10.20444"; pos "mid"	0	0	0	0
chr10	104253809	104254461	-	repeat_id "MER4CL34,chr10,104253809,104254461";repeat_class "LTR";repeat_family "ERV1";	chr10	104254194	104254499	exon	assembly	+	gene_id "ENSG00000148834.12"; ID "440438"; transcript_id "ENST00000539281.5"; exon "1"; exon_id "chr10.20882"; pos "first"	0	0	0	0
chr10	110901008	110901290	+	repeat_id "AluJo,chr10,110901008,110901290";repeat_class "SINE";repeat_family "Alu";	chr10	110901026	110901122	exon	assembly	-	gene_id "ENSG00000214413.7"; ID "441112"; transcript_id "ENST00000398289.2"; exon "4"; exon_id "chr10.21517"; pos "mid"	0	0	0	0
chr10	112448371	112448485	+	repeat_id "L2c,chr10,112448371,112448485";repeat_class "LINE";repeat_family "L2";	chr10	112448382	112448489	exon	assembly	+	gene_id "ENSG00000151532.13"; ID "441343"; transcript_id "ENST00000483122.1"; exon "2"; exon_id "chr10.21735"; pos "mid"	0	0	0	0
chr10	113688267	113693127	-	repeat_id "L1PBb,chr10,113688267,113693127";repeat_class "LINE";repeat_family "L1";	chr10	113691964	113692070	exon	assembly	+	gene_id "ENSG00000165806.19"; ID "441709"; transcript_id "ENST00000369315.5"; exon "2"; exon_id "chr10.21992"; pos "mid"	8.19592	0	0	0
chr10	116835163	116835275	+	repeat_id "MIRb,chr10,116835163,116835275";repeat_class "SINE";repeat_family "MIR";	chr10	116835198	116835257	exon	assembly	-	gene_id "ENSG00000225302.2"; ID "442452"; transcript_id "ENST00000453491.2"; exon "2"; exon_id "chr10.22606"; pos "mid"	0	18.3078	0	0
chr10	121961823	121962127	+	repeat_id "AluSx,chr10,121961823,121962127";repeat_class "SINE";repeat_family "Alu";	chr10	121961757	121962107	exon	assembly	-	gene_id "ENSG00000107672.14"; ID "443938"; transcript_id "ENST00000369017.5"; exon "7"; exon_id "chr10.23640"; pos "last"	0	0	0	0
chr10	122209688	122209991	-	repeat_id "AluSz,chr10,122209688,122209991";repeat_class "SINE";repeat_family "Alu";	chr10	122209874	122209969	exon	assembly	+	gene_id "ENSG00000138162.18"; ID "444054"; transcript_id "ENST00000369001.5"; exon "4"; exon_id "chr10.23706"; pos "mid"	0	0	0	0
chr10	122392194	122392492	-	repeat_id "L1MC5,chr10,122392194,122392492";repeat_class "LINE";repeat_family "L1";	chr10	122392303	122392372	exon	assembly	+	gene_id "ENSG00000107679.14"; ID "444163"; transcript_id "transcript94440.chr10.nnic"; exon "2"; exon_id "chr10.23792"; pos "mid"	159.309	79.3334	150.296	34.5086
chr10	122392194	122392492	-	repeat_id "L1MC5,chr10,122392194,122392492";repeat_class "LINE";repeat_family "L1";	chr10	122392303	122392372	exon	assembly	+	gene_id "ENSG00000107679.14"; ID "444178"; transcript_id "transcript94486.chr10.nnic"; exon "2"; exon_id "chr10.23792"; pos "mid"	159.309	79.3334	150.296	34.5086
chr10	122852086	122852506	+	repeat_id "L1MCa,chr10,122852086,122852506";repeat_class "LINE";repeat_family "L1";	chr10	122852329	122852477	exon	assembly	-	gene_id "ENSG00000213185.6"; ID "444391"; transcript_id "transcript95153.chr10.nnic"; exon "1"; exon_id "chr10.24012"; pos "first"	4.098	35.0896	0	0
chr10	122987137	122987538	-	repeat_id "L2a,chr10,122987137,122987538";repeat_class "LINE";repeat_family "L2";	chr10	122987334	122987504	exon	assembly	+	gene_id "ENSG00000179988.13"; ID "444495"; transcript_id "ENST00000368887.7"; exon "6"; exon_id "chr10.24070"; pos "mid"	0	0	0	0
chr10	124414800	124415105	+	repeat_id "AluJo,chr10,124414800,124415105";repeat_class "SINE";repeat_family "Alu";	chr10	124414953	124415072	exon	assembly	-	gene_id "ENSG00000065154.11"; ID "444708"; transcript_id "transcript96205.chr10.nnic"; exon "2"; exon_id "chr10.24239"; pos "mid"	107.572	17.7992	38.6789	0
chr10	124762327	124762606	+	repeat_id "AluJb,chr10,124762327,124762606";repeat_class "SINE";repeat_family "Alu";	chr10	124762300	124762558	exon	assembly	-	gene_id "ENSG00000203791.14"; ID "444863"; transcript_id "ENST00000368836.6"; exon "6"; exon_id "chr10.24338"; pos "mid"	0	16.7821	0	0
chr10	125709464	125709584	+	repeat_id "AluJb,chr10,125709464,125709584";repeat_class "SINE";repeat_family "Alu";	chr10	125709498	125709567	exon	assembly	-	gene_id "ENSG00000224023.10"; ID "445188"; transcript_id "ENST00000528844.1"; exon "2"; exon_id "chr10.24515"; pos "mid"	16.9043	0	0	0
chr10	125820124	125820616	-	repeat_id "MLT2B1,chr10,125820124,125820616";repeat_class "LTR";repeat_family "ERVL";	chr10	125820553	125820598	exon	assembly	+	gene_id "ENSG00000107949.16"; ID "445404"; transcript_id "transcript98390.chr10.nnic"; exon "1"; exon_id "chr10.24697"; pos "first"	0	0	0	0
chr10	130180096	130180342	-	repeat_id "AluJb,chr10,130180096,130180342";repeat_class "SINE";repeat_family "Alu";	chr10	130180113	130180382	exon	assembly	+	gene_id "ENSG00000108010.11"; ID "446202"; transcript_id "ENST00000496195.1"; exon "2"; exon_id "chr10.25257"; pos "last"	0	0	0	0
chr11	309445	310164	-	repeat_id "LTR30,chr11,309445,310164";repeat_class "LTR";repeat_family "ERV1";	chr11	309982	310171	exon	assembly	+	gene_id "ENSG00000185885.15"; ID "447058"; transcript_id "transcript887.chr11.nnic"; exon "1"; exon_id "chr11.283"; pos "first"	0	0	0	0
chr11	903500	903800	+	repeat_id "AluSq2,chr11,903500,903800";repeat_class "SINE";repeat_family "Alu";	chr11	903704	903778	exon	assembly	-	gene_id "ENSG00000177830.17"; ID "448269"; transcript_id "ENST00000528581.5"; exon "3"; exon_id "chr11.1423"; pos "mid"	0	0	0	0
chr11	4105569	4105863	-	repeat_id "AluJo,chr11,4105569,4105863";repeat_class "SINE";repeat_family "Alu";	chr11	4105606	4105691	exon	assembly	+	gene_id "ENSG00000167325.14"; ID "449874"; transcript_id "ENST00000532170.5"; exon "3"; exon_id "chr11.3269"; pos "mid"	0	0	0	0
chr11	5872290	5872938	+	repeat_id "MER77B,chr11,5872290,5872938";repeat_class "LTR";repeat_family "ERVL";	chr11	5872315	5872358	exon	assembly	-	gene_id "ENSG00000132256.18"; ID "450031"; transcript_id "ENST00000380027.5"; exon "1"; exon_id "chr11.3557"; pos "first"	0	0	0	0
chr11	7677066	7677444	-	repeat_id "THE1C,chr11,7677066,7677444";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	7677148	7677255	exon	assembly	-	gene_id "ENSG00000166394.14"; ID "450801"; transcript_id "transcript11278.chr11.nnic"; exon "1"; exon_id "chr11.4576"; pos "first"	0	33.564	0	32.5367
chr11	7677066	7677444	-	repeat_id "THE1C,chr11,7677066,7677444";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	7677148	7677255	exon	assembly	-	gene_id "ENSG00000166394.14"; ID "450823"; transcript_id "transcript11284.chr11.nnic"; exon "1"; exon_id "chr11.4576"; pos "first"	0	33.564	0	32.5367
chr11	7677066	7677444	-	repeat_id "THE1C,chr11,7677066,7677444";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	7677148	7677337	exon	assembly	-	gene_id "ENSG00000166394.14"; ID "450812"; transcript_id "transcript11280.chr11.nic"; exon "1"; exon_id "chr11.4586"; pos "first"	0	33.564	0	32.5367
chr11	7906775	7908160	+	repeat_id "LTR49-int,chr11,7906775,7908160";repeat_class "LTR";repeat_family "ERV1";	chr11	7907162	7907335	exon	assembly	+	gene_id "novel_gene_chr11_11432"; ID "450899"; transcript_id "transcript11431.chr11.nnic"; exon "2"; exon_id "chr11.4660"; pos "mid"	39.9551	0	0	0
chr11	7906775	7908160	+	repeat_id "LTR49-int,chr11,7906775,7908160";repeat_class "LTR";repeat_family "ERV1";	chr11	7907162	7907335	exon	assembly	+	gene_id "novel_gene_chr11_11498"; ID "450906"; transcript_id "transcript11497.chr11.nnic"; exon "2"; exon_id "chr11.4660"; pos "mid"	39.9551	0	0	0
chr11	7906775	7908160	+	repeat_id "LTR49-int,chr11,7906775,7908160";repeat_class "LTR";repeat_family "ERV1";	chr11	7907162	7907335	exon	assembly	+	gene_id "novel_gene_chr11_11512"; ID "450916"; transcript_id "transcript11511.chr11.nnic"; exon "2"; exon_id "chr11.4660"; pos "mid"	39.9551	0	0	0
chr11	8654175	8654581	+	repeat_id "L2c,chr11,8654175,8654581";repeat_class "LINE";repeat_family "L2";	chr11	8654434	8654578	exon	assembly	-	gene_id "ENSG00000166436.15"; ID "450978"; transcript_id "ENST00000402157.6"; exon "3"; exon_id "chr11.4824"; pos "mid"	0	0	0	0
chr11	9140170	9140414	-	repeat_id "MIR,chr11,9140170,9140414";repeat_class "SINE";repeat_family "MIR";	chr11	9140189	9140248	exon	assembly	-	gene_id "ENSG00000184014.7"; ID "451426"; transcript_id "ENST00000533737.5"; exon "4"; exon_id "chr11.5270"; pos "mid"	0	17.2907	0	0
chr11	9576216	9576303	+	repeat_id "L3,chr11,9576216,9576303";repeat_class "LINE";repeat_family "CR1";	chr11	9576230	9576293	exon	assembly	+	gene_id "ENSG00000166483.10"; ID "451770"; transcript_id "ENST00000450114.6"; exon "3"; exon_id "chr11.5534"; pos "mid"	48.1513	33.0555	0	0
chr11	9576216	9576303	+	repeat_id "L3,chr11,9576216,9576303";repeat_class "LINE";repeat_family "CR1";	chr11	9576230	9576293	exon	assembly	+	gene_id "ENSG00000166483.10"; ID "451781"; transcript_id "ENST00000524549.1"; exon "2"; exon_id "chr11.5534"; pos "mid"	48.1513	33.0555	0	0
chr11	10854673	10855269	-	repeat_id "Charlie14a,chr11,10854673,10855269";repeat_class "DNA";repeat_family "hAT-Charlie";	chr11	10854619	10855081	exon	assembly	-	gene_id "ENSG00000236287.7"; ID "452534"; transcript_id "ENST00000526020.5"; exon "3"; exon_id "chr11.6165"; pos "last"	17.9288	0	0	0
chr11	12249187	12249364	+	repeat_id "MIRb,chr11,12249187,12249364";repeat_class "SINE";repeat_family "MIR";	chr11	12249184	12249246	exon	assembly	+	gene_id "ENSG00000133816.13"; ID "452956"; transcript_id "transcript17587.chr11.nic"; exon "18"; exon_id "chr11.6421"; pos "mid"	0	0	0	13.8034
chr11	17282798	17282939	+	repeat_id "MIRc,chr11,17282798,17282939";repeat_class "SINE";repeat_family "MIR";	chr11	17282789	17282943	exon	assembly	+	gene_id "ENSG00000070081.15"; ID "454237"; transcript_id "ENST00000529313.5"; exon "2"; exon_id "chr11.7449"; pos "mid"	107.06	163.243	50.8351	9.8596
chr11	17282798	17282939	+	repeat_id "MIRc,chr11,17282798,17282939";repeat_class "SINE";repeat_family "MIR";	chr11	17282789	17282943	exon	assembly	+	gene_id "ENSG00000070081.15"; ID "454246"; transcript_id "ENST00000323688.10"; exon "2"; exon_id "chr11.7449"; pos "mid"	107.06	163.243	50.8351	9.8596
chr11	18393410	18393721	+	repeat_id "AluSz,chr11,18393410,18393721";repeat_class "SINE";repeat_family "Alu";	chr11	18393414	18393675	exon	assembly	+	gene_id "ENSG00000134333.13"; ID "454817"; transcript_id "transcript23338.chr11.nnic"; exon "1"; exon_id "chr11.8055"; pos "first"	0	0	0	0
chr11	18525563	18525701	+	repeat_id "hAT-5_Mam,chr11,18525563,18525701";repeat_class "DNA";repeat_family "hAT-Tag1";	chr11	18525661	18525702	exon	assembly	-	gene_id "ENSG00000074319.12"; ID "454936"; transcript_id "transcript23772.chr11.nic"; exon "2"; exon_id "chr11.8133"; pos "mid"	0	0	0	0
chr11	28328099	28328713	+	repeat_id "L4_C_Mam,chr11,28328099,28328713";repeat_class "LINE";repeat_family "RTE-X";	chr11	28328095	28328165	exon	assembly	+	gene_id "ENSG00000169519.20"; ID "456150"; transcript_id "ENST00000303459.10"; exon "6"; exon_id "chr11.9306"; pos "mid"	0	0	0	0
chr11	33141731	33141987	-	repeat_id "HAL1ME,chr11,33141731,33141987";repeat_class "LINE";repeat_family "L1";	chr11	33141885	33141986	exon	assembly	-	gene_id "ENSG00000176102.11"; ID "456789"; transcript_id "transcript29232.chr11.nic"; exon "3"; exon_id "chr11.10131"; pos "mid"	99.3757	146.97	36.4686	152.824
chr11	33141731	33141987	-	repeat_id "HAL1ME,chr11,33141731,33141987";repeat_class "LINE";repeat_family "L1";	chr11	33141885	33141986	exon	assembly	-	gene_id "ENSG00000176102.11"; ID "456793"; transcript_id "ENST00000438862.6"; exon "2"; exon_id "chr11.10131"; pos "mid"	99.3757	146.97	36.4686	152.824
chr11	33141731	33141987	-	repeat_id "HAL1ME,chr11,33141731,33141987";repeat_class "LINE";repeat_family "L1";	chr11	33141885	33141986	exon	assembly	-	gene_id "ENSG00000176102.11"; ID "456800"; transcript_id "ENST00000323959.8"; exon "2"; exon_id "chr11.10131"; pos "mid"	99.3757	146.97	36.4686	152.824
chr11	33156699	33156803	+	repeat_id "AluJo,chr11,33156699,33156803";repeat_class "SINE";repeat_family "Alu";	chr11	33156708	33156803	exon	assembly	-	gene_id "ENSG00000176102.11"; ID "456788"; transcript_id "transcript29232.chr11.nic"; exon "2"; exon_id "chr11.10130"; pos "mid"	0	0	0	0
chr11	33178522	33178888	+	repeat_id "THE1C,chr11,33178522,33178888";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	33178712	33178808	exon	assembly	+	gene_id "ENSG00000247151.6"; ID "456842"; transcript_id "transcript29617.chr11.nnic"; exon "2"; exon_id "chr11.10161"; pos "mid"	0	0	0	0
chr11	33711406	33711688	+	repeat_id "AluJr,chr11,33711406,33711688";repeat_class "SINE";repeat_family "Alu";	chr11	33711384	33711505	exon	assembly	-	gene_id "ENSG00000085063.14"; ID "457028"; transcript_id "ENST00000533403.5"; exon "4"; exon_id "chr11.10306"; pos "mid"	0	0	0	0
chr11	33733335	33733634	+	repeat_id "AluSz6,chr11,33733335,33733634";repeat_class "SINE";repeat_family "Alu";	chr11	33733495	33733610	exon	assembly	-	gene_id "ENSG00000085063.14"; ID "456995"; transcript_id "ENST00000527577.5"; exon "2"; exon_id "chr11.10291"; pos "mid"	0	0	0	0
chr11	33742801	33743255	-	repeat_id "MLT1G,chr11,33742801,33743255";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	33742776	33743158	exon	assembly	-	gene_id "ENSG00000110429.13"; ID "457083"; transcript_id "transcript30618.chr11.nnic"; exon "11"; exon_id "chr11.10364"; pos "last"	66.0798	24.9189	54.1504	0
chr11	35451669	35452016	+	repeat_id "MLT1A0,chr11,35451669,35452016";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	35451888	35451938	exon	assembly	-	gene_id "ENSG00000149090.11"; ID "457712"; transcript_id "ENST00000622144.4"; exon "7"; exon_id "chr11.10865"; pos "mid"	0	0	0	0
chr11	43754912	43755575	+	repeat_id "Tigger13a,chr11,43754912,43755575";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	43754873	43755536	exon	assembly	+	gene_id "ENSG00000149084.12"; ID "458588"; transcript_id "ENST00000395700.4"; exon "4"; exon_id "chr11.11501"; pos "last"	0	0	0	0
chr11	44940990	44941133	+	repeat_id "MIRb,chr11,44940990,44941133";repeat_class "SINE";repeat_family "MIR";	chr11	44941003	44941077	exon	assembly	-	gene_id "ENSG00000175274.18"; ID "458844"; transcript_id "ENST00000395648.7"; exon "2"; exon_id "chr11.11876"; pos "mid"	0	0	0	0
chr11	46629972	46630118	-	repeat_id "AluJb,chr11,46629972,46630118";repeat_class "SINE";repeat_family "Alu";	chr11	46630045	46630100	exon	assembly	+	gene_id "ENSG00000175224.16"; ID "459590"; transcript_id "ENST00000524625.5"; exon "2"; exon_id "chr11.12569"; pos "mid"	34.833	17.7992	0	34.5086
chr11	59108290	59108705	-	repeat_id "L1MEc,chr11,59108290,59108705";repeat_class "LINE";repeat_family "L1";	chr11	59108668	59108712	exon	assembly	+	gene_id "ENSG00000189057.10"; ID "462086"; transcript_id "transcript45118.chr11.nnic"; exon "2"; exon_id "chr11.15038"; pos "mid"	0	31.0214	0	0
chr11	59126344	59127397	+	repeat_id "L1PA15,chr11,59126344,59127397";repeat_class "LINE";repeat_family "L1";	chr11	59127261	59127415	exon	assembly	+	gene_id "ENSG00000189057.10"; ID "462088"; transcript_id "transcript45118.chr11.nnic"; exon "4"; exon_id "chr11.15040"; pos "last"	0	0	0	0
chr11	59730590	59731298	-	repeat_id "Ricksha_0,chr11,59730590,59731298";repeat_class "DNA";repeat_family "MULE-MuDR";	chr11	59730758	59730880	exon	assembly	+	gene_id "ENSG00000166900.16"; ID "462440"; transcript_id "transcript45931.chr11.nnic"; exon "3"; exon_id "chr11.15355"; pos "last"	0	0	0	0
chr11	61372925	61373825	+	repeat_id "MER4-int,chr11,61372925,61373825";repeat_class "LTR";repeat_family "ERV1";	chr11	61373043	61373410	exon	assembly	+	gene_id "ENSG00000149483.11"; ID "462932"; transcript_id "transcript47327.chr11.nnic"; exon "5"; exon_id "chr11.16307"; pos "last"	0	0	0	0
chr11	62600156	62600287	-	repeat_id "L2a,chr11,62600156,62600287";repeat_class "LINE";repeat_family "L2";	chr11	62600166	62600259	exon	assembly	-	gene_id "ENSG00000149480.6"; ID "463823"; transcript_id "transcript52393.chr11.nnic"; exon "3"; exon_id "chr11.17165"; pos "mid"	140.868	36.6155	28.7329	37.4665
chr11	62600156	62600287	-	repeat_id "L2a,chr11,62600156,62600287";repeat_class "LINE";repeat_family "L2";	chr11	62600166	62600259	exon	assembly	-	gene_id "ENSG00000149480.6"; ID "463843"; transcript_id "ENST00000278823.6"; exon "3"; exon_id "chr11.17165"; pos "mid"	140.868	36.6155	28.7329	37.4665
chr11	62639954	62640252	+	repeat_id "AluY,chr11,62639954,62640252";repeat_class "SINE";repeat_family "Alu";	chr11	62639930	62640066	exon	assembly	-	gene_id "ENSG00000089597.16"; ID "463950"; transcript_id "transcript52227.chr11.nic"; exon "2"; exon_id "chr11.17232"; pos "mid"	0	0	0	0
chr11	62772013	62772233	+	repeat_id "MIRb,chr11,62772013,62772233";repeat_class "SINE";repeat_family "MIR";	chr11	62772066	62772132	exon	assembly	-	gene_id "ENSG00000168569.7"; ID "464477"; transcript_id "transcript54995.chr11.nnic"; exon "3"; exon_id "chr11.17616"; pos "mid"	0	0	0	0
chr11	62841624	62841809	-	repeat_id "U2,chr11,62841624,62841809";repeat_class "snRNA";repeat_family "snRNA";	chr11	62841619	62841809	exon	assembly	-	gene_id "ENSG00000222328.1"; ID "464760"; transcript_id "ENST00000410396.1"; exon "1"; exon_id "chr11.17780";	1859.45	1807.88	1185.79	1904.88
chr11	62871565	62871670	-	repeat_id "AluJr,chr11,62871565,62871670";repeat_class "SINE";repeat_family "Alu";	chr11	62871577	62871669	exon	assembly	+	gene_id "ENSG00000168003.16"; ID "464915"; transcript_id "ENST00000377891.6"; exon "2"; exon_id "chr11.17828"; pos "mid"	50.7125	0	30.9431	0
chr11	62871565	62871670	-	repeat_id "AluJr,chr11,62871565,62871670";repeat_class "SINE";repeat_family "Alu";	chr11	62871577	62871669	exon	assembly	+	gene_id "ENSG00000168003.16"; ID "464939"; transcript_id "ENST00000535296.5"; exon "2"; exon_id "chr11.17828"; pos "mid"	50.7125	0	30.9431	0
chr11	62876589	62876898	-	repeat_id "AluSq2,chr11,62876589,62876898";repeat_class "SINE";repeat_family "Alu";	chr11	62876784	62876879	exon	assembly	+	gene_id "ENSG00000168003.16"; ID "464916"; transcript_id "ENST00000377891.6"; exon "3"; exon_id "chr11.17832"; pos "mid"	35.3449	0	0	0
chr11	63990320	63990625	+	repeat_id "AluJo,chr11,63990320,63990625";repeat_class "SINE";repeat_family "Alu";	chr11	63990287	63990632	exon	assembly	+	gene_id "ENSG00000167770.11"; ID "465495"; transcript_id "ENST00000536443.1"; exon "4"; exon_id "chr11.18423"; pos "last"	37.9061	17.2907	0	0
chr11	65665399	65665567	-	repeat_id "AluSq2,chr11,65665399,65665567";repeat_class "SINE";repeat_family "Alu";	chr11	65665421	65665543	exon	assembly	+	gene_id "novel_gene_chr11_66603"; ID "467894"; transcript_id "transcript66602.chr11.nnic"; exon "2"; exon_id "chr11.20817"; pos "mid"	39.9552	0	0	0
chr11	65666033	65666381	+	repeat_id "MER87B,chr11,65666033,65666381";repeat_class "LTR";repeat_family "ERV1";	chr11	65666131	65666217	exon	assembly	+	gene_id "novel_gene_chr11_66603"; ID "467895"; transcript_id "transcript66602.chr11.nnic"; exon "3"; exon_id "chr11.20819"; pos "mid"	0	0	0	0
chr11	65671269	65671756	+	repeat_id "MLT2B2,chr11,65671269,65671756";repeat_class "LTR";repeat_family "ERVL";	chr11	65671423	65671718	exon	assembly	+	gene_id "novel_gene_chr11_66603"; ID "467896"; transcript_id "transcript66602.chr11.nnic"; exon "4"; exon_id "chr11.20820"; pos "last"	0	0	0	0
chr11	66468752	66468976	-	repeat_id "MIR,chr11,66468752,66468976";repeat_class "SINE";repeat_family "MIR";	chr11	66468833	66468904	exon	assembly	+	gene_id "ENSG00000174516.14"; ID "469151"; transcript_id "ENST00000320740.11"; exon "3"; exon_id "chr11.21826"; pos "mid"	0	10.171	75.1478	0
chr11	66474720	66475030	-	repeat_id "AluSx,chr11,66474720,66475030";repeat_class "SINE";repeat_family "Alu";	chr11	66474720	66475104	exon	assembly	-	gene_id "ENSG00000255517.6"; ID "469167"; transcript_id "transcript72455.chr11.nic"; exon "2"; exon_id "chr11.21836"; pos "last"	0	6.61115	0	0
chr11	67330664	67331383	+	repeat_id "Tigger2,chr11,67330664,67331383";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	67330870	67331128	exon	assembly	+	gene_id "ENSG00000172613.7"; ID "470456"; transcript_id "transcript75320.chr11.nnic"; exon "3"; exon_id "chr11.22732"; pos "last"	0	17.2907	0	0
chr11	67330664	67331383	+	repeat_id "Tigger2,chr11,67330664,67331383";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	67330870	67331128	exon	assembly	+	gene_id "ENSG00000172613.7"; ID "470460"; transcript_id "transcript75326.chr11.nnic"; exon "3"; exon_id "chr11.22732"; pos "last"	0	17.2907	0	0
chr11	68180115	68180214	+	repeat_id "MIRc,chr11,68180115,68180214";repeat_class "SINE";repeat_family "MIR";	chr11	68180132	68180200	exon	assembly	-	gene_id "ENSG00000110066.14"; ID "471274"; transcript_id "ENST00000304363.8"; exon "4"; exon_id "chr11.23649"; pos "mid"	43.0287	56.4488	59.6762	34.5086
chr11	68180115	68180214	+	repeat_id "MIRc,chr11,68180115,68180214";repeat_class "SINE";repeat_family "MIR";	chr11	68180132	68180200	exon	assembly	-	gene_id "ENSG00000110066.14"; ID "471320"; transcript_id "ENST00000402789.5"; exon "4"; exon_id "chr11.23649"; pos "mid"	43.0287	56.4488	59.6762	34.5086
chr11	68180115	68180214	+	repeat_id "MIRc,chr11,68180115,68180214";repeat_class "SINE";repeat_family "MIR";	chr11	68180132	68180200	exon	assembly	-	gene_id "ENSG00000110066.14"; ID "471332"; transcript_id "ENST00000405515.5"; exon "4"; exon_id "chr11.23649"; pos "mid"	43.0287	56.4488	59.6762	34.5086
chr11	69316739	69316942	+	repeat_id "MIRb,chr11,69316739,69316942";repeat_class "SINE";repeat_family "MIR";	chr11	69316834	69316925	exon	assembly	+	gene_id "ENSG00000172927.7"; ID "472298"; transcript_id "transcript79688.chr11.nnic"; exon "2"; exon_id "chr11.24193"; pos "mid"	0	0	0	0
chr11	70402310	70403182	-	repeat_id "L1MB7,chr11,70402310,70403182";repeat_class "LINE";repeat_family "L1";	chr11	70402839	70403012	exon	assembly	+	gene_id "ENSG00000085733.15"; ID "472642"; transcript_id "transcript80322.chr11.nnic"; exon "2"; exon_id "chr11.24501"; pos "mid"	25.6122	0	0	0
chr11	71434373	71434696	-	repeat_id "LTR41B,chr11,71434373,71434696";repeat_class "LTR";repeat_family "ERVL";	chr11	71434411	71434709	exon	assembly	-	gene_id "ENSG00000172893.15"; ID "472887"; transcript_id "transcript81049.chr11.nnic"; exon "7"; exon_id "chr11.24763"; pos "last"	40.4674	45.7691	36.4686	0
chr11	71451265	71452186	+	repeat_id "MER49,chr11,71451265,71452186";repeat_class "LTR";repeat_family "ERV1";	chr11	71451690	71452157	exon	assembly	+	gene_id "ENSG00000254682.1"; ID "472910"; transcript_id "ENST00000529369.1"; exon "2"; exon_id "chr11.24771"; pos "last"	0	72.2137	0	100.568
chr11	71459870	71460288	-	repeat_id "MLT1D,chr11,71459870,71460288";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	71459954	71460213	exon	assembly	+	gene_id "ENSG00000172890.11"; ID "472966"; transcript_id "transcript81121.chr11.nnic"; exon "4"; exon_id "chr11.24799"; pos "mid"	0	35.5982	0	36.4805
chr11	72062431	72062731	+	repeat_id "AluSq2,chr11,72062431,72062731";repeat_class "SINE";repeat_family "Alu";	chr11	72062589	72062686	exon	assembly	-	gene_id "ENSG00000137497.17"; ID "473249"; transcript_id "ENST00000358965.10"; exon "3"; exon_id "chr11.25028"; pos "mid"	0	0	0	0
chr11	72088231	72088402	-	repeat_id "MamTip2b,chr11,72088231,72088402";repeat_class "DNA";repeat_family "hAT-Tip100";	chr11	72088297	72088380	exon	assembly	+	gene_id "ENSG00000184154.13"; ID "473393"; transcript_id "ENST00000289488.6"; exon "2"; exon_id "chr11.25047"; pos "mid"	0	0	0	0
chr11	72088231	72088402	-	repeat_id "MamTip2b,chr11,72088231,72088402";repeat_class "DNA";repeat_family "hAT-Tip100";	chr11	72088297	72088380	exon	assembly	+	gene_id "ENSG00000184154.13"; ID "473407"; transcript_id "ENST00000324866.11"; exon "2"; exon_id "chr11.25047"; pos "mid"	0	0	0	0
chr11	72111398	72111582	+	repeat_id "MIRb,chr11,72111398,72111582";repeat_class "SINE";repeat_family "MIR";	chr11	72111412	72111496	exon	assembly	-	gene_id "ENSG00000110200.8"; ID "473434"; transcript_id "ENST00000542531.5"; exon "2"; exon_id "chr11.25072"; pos "mid"	48.1511	0	0	0
chr11	72111398	72111582	+	repeat_id "MIRb,chr11,72111398,72111582";repeat_class "SINE";repeat_family "MIR";	chr11	72111412	72111496	exon	assembly	-	gene_id "ENSG00000110200.8"; ID "473458"; transcript_id "ENST00000538393.5"; exon "2"; exon_id "chr11.25072"; pos "mid"	48.1511	0	0	0
chr11	72111398	72111582	+	repeat_id "MIRb,chr11,72111398,72111582";repeat_class "SINE";repeat_family "MIR";	chr11	72111412	72111496	exon	assembly	-	gene_id "ENSG00000110200.8"; ID "473471"; transcript_id "ENST00000545680.5"; exon "2"; exon_id "chr11.25072"; pos "mid"	48.1511	0	0	0
chr11	72111398	72111582	+	repeat_id "MIRb,chr11,72111398,72111582";repeat_class "SINE";repeat_family "MIR";	chr11	72111442	72111496	exon	assembly	-	gene_id "ENSG00000110200.8"; ID "473451"; transcript_id "ENST00000535234.5"; exon "2"; exon_id "chr11.25082"; pos "mid"	48.1511	0	0	0
chr11	73886750	73887180	+	repeat_id "MSTB1,chr11,73886750,73887180";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	73887031	73887099	exon	assembly	+	gene_id "ENSG00000175575.12"; ID "474568"; transcript_id "ENST00000536003.5"; exon "3"; exon_id "chr11.26289"; pos "mid"	0	18.3078	0	0
chr11	73886750	73887180	+	repeat_id "MSTB1,chr11,73886750,73887180";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	73887040	73887099	exon	assembly	+	gene_id "ENSG00000175575.12"; ID "474582"; transcript_id "ENST00000544552.5"; exon "3"; exon_id "chr11.26293"; pos "mid"	0	18.3078	0	0
chr11	73886750	73887180	+	repeat_id "MSTB1,chr11,73886750,73887180";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	73887063	73887099	exon	assembly	+	gene_id "ENSG00000175575.12"; ID "474594"; transcript_id "ENST00000376384.9"; exon "1"; exon_id "chr11.26295"; pos "first"	0	18.3078	0	0
chr11	76441352	76441645	-	repeat_id "AluSp,chr11,76441352,76441645";repeat_class "SINE";repeat_family "Alu";	chr11	76441338	76441639	exon	assembly	-	gene_id "ENSG00000255135.3"; ID "475795"; transcript_id "ENST00000530759.1"; exon "2"; exon_id "chr11.27421"; pos "last"	0	0	0	0
chr11	76819851	76820182	-	repeat_id "MER51B,chr11,76819851,76820182";repeat_class "LTR";repeat_family "ERV1";	chr11	76819932	76820173	exon	assembly	-	gene_id "novel_gene_chr11_87930"; ID "475970"; transcript_id "transcript87929.chr11.nnic"; exon "3"; exon_id "chr11.27567"; pos "last"	0	0	0	0
chr11	76822104	76823055	+	repeat_id "L1MD2,chr11,76822104,76823055";repeat_class "LINE";repeat_family "L1";	chr11	76822838	76822939	exon	assembly	-	gene_id "novel_gene_chr11_87930"; ID "475969"; transcript_id "transcript87929.chr11.nnic"; exon "2"; exon_id "chr11.27569"; pos "mid"	0	0	0	0
chr11	77408099	77408289	+	repeat_id "L2a,chr11,77408099,77408289";repeat_class "LINE";repeat_family "L2";	chr11	77408154	77408232	exon	assembly	-	gene_id "ENSG00000149269.9"; ID "476236"; transcript_id "ENST00000528633.1"; exon "2"; exon_id "chr11.27806"; pos "mid"	0	0	0	0
chr11	77840934	77841304	-	repeat_id "MSTD,chr11,77840934,77841304";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	77841019	77841060	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476391"; transcript_id "ENST00000526415.5"; exon "2"; exon_id "chr11.27928"; pos "mid"	48.1512	35.5985	36.4686	0
chr11	77840934	77841304	-	repeat_id "MSTD,chr11,77840934,77841304";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	77841019	77841060	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476408"; transcript_id "ENST00000525409.5"; exon "2"; exon_id "chr11.27928"; pos "mid"	48.1512	35.5985	36.4686	0
chr11	77840934	77841304	-	repeat_id "MSTD,chr11,77840934,77841304";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	77841019	77841060	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476419"; transcript_id "ENST00000533193.5"; exon "1"; exon_id "chr11.27928"; pos "first"	48.1512	35.5985	36.4686	0
chr11	77840934	77841304	-	repeat_id "MSTD,chr11,77840934,77841304";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	77841019	77841224	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476385"; transcript_id "transcript88819.chr11.nic"; exon "2"; exon_id "chr11.27926"; pos "mid"	48.1512	35.5985	36.4686	0
chr11	77855313	77855628	-	repeat_id "AluY,chr11,77855313,77855628";repeat_class "SINE";repeat_family "Alu";	chr11	77855345	77855482	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476380"; transcript_id "transcript88791.chr11.nic"; exon "3"; exon_id "chr11.27922"; pos "mid"	0	0	0	53.2421
chr11	77855313	77855628	-	repeat_id "AluY,chr11,77855313,77855628";repeat_class "SINE";repeat_family "Alu";	chr11	77855345	77855482	exon	assembly	+	gene_id "ENSG00000087884.14"; ID "476421"; transcript_id "ENST00000533193.5"; exon "3"; exon_id "chr11.27922"; pos "mid"	0	0	0	53.2421
chr11	78102671	78102969	+	repeat_id "AluSp,chr11,78102671,78102969";repeat_class "SINE";repeat_family "Alu";	chr11	78102874	78102948	exon	assembly	-	gene_id "ENSG00000159063.12"; ID "476561"; transcript_id "ENST00000376156.7"; exon "13"; exon_id "chr11.28077"; pos "mid"	0	0	0	0
chr11	82884686	82884907	+	repeat_id "MIRb,chr11,82884686,82884907";repeat_class "SINE";repeat_family "MIR";	chr11	82884823	82884885	exon	assembly	-	gene_id "ENSG00000137509.10"; ID "477078"; transcript_id "ENST00000393399.6"; exon "2"; exon_id "chr11.28470"; pos "mid"	0	0	0	0
chr11	82913267	82913544	-	repeat_id "AluJb,chr11,82913267,82913544";repeat_class "SINE";repeat_family "Alu";	chr11	82913287	82913386	exon	assembly	+	gene_id "ENSG00000165490.12"; ID "477107"; transcript_id "transcript91079.chr11.nnic"; exon "2"; exon_id "chr11.28517"; pos "mid"	143.941	175.449	77.3577	121.273
chr11	82913267	82913544	-	repeat_id "AluJb,chr11,82913267,82913544";repeat_class "SINE";repeat_family "Alu";	chr11	82913287	82913386	exon	assembly	+	gene_id "ENSG00000165490.12"; ID "477128"; transcript_id "ENST00000533655.5"; exon "2"; exon_id "chr11.28517"; pos "mid"	143.941	175.449	77.3577	121.273
chr11	82913267	82913544	-	repeat_id "AluJb,chr11,82913267,82913544";repeat_class "SINE";repeat_family "Alu";	chr11	82913287	82913386	exon	assembly	+	gene_id "ENSG00000165490.12"; ID "477141"; transcript_id "ENST00000528759.5"; exon "2"; exon_id "chr11.28517"; pos "mid"	143.941	175.449	77.3577	121.273
chr11	83034715	83034864	-	repeat_id "MIRb,chr11,83034715,83034864";repeat_class "SINE";repeat_family "MIR";	chr11	83034727	83034782	exon	assembly	-	gene_id "ENSG00000137502.9"; ID "477162"; transcript_id "transcript91092.chr11.nic"; exon "2"; exon_id "chr11.28555"; pos "mid"	0	0	0	0
chr11	83191067	83191268	+	repeat_id "MIRb,chr11,83191067,83191268";repeat_class "SINE";repeat_family "MIR";	chr11	83191055	83191168	exon	assembly	-	gene_id "ENSG00000247137.8"; ID "477355"; transcript_id "transcript91929.chr11.nic"; exon "3"; exon_id "chr11.28685"; pos "mid"	75.3003	53.3974	36.4686	0
chr11	86269732	86272054	-	repeat_id "L1MD1,chr11,86269732,86272054";repeat_class "LINE";repeat_family "L1";	chr11	86270083	86270157	exon	assembly	+	gene_id "ENSG00000074266.19"; ID "478060"; transcript_id "ENST00000351625.10"; exon "10"; exon_id "chr11.29242"; pos "mid"	0	0	0	0
chr11	93499227	93499372	+	repeat_id "Tigger20a,chr11,93499227,93499372";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	93499276	93499348	exon	assembly	-	gene_id "ENSG00000166002.6"; ID "478651"; transcript_id "ENST00000298966.6"; exon "2"; exon_id "chr11.29982"; pos "mid"	0	0	0	0
chr11	94975635	94975775	+	repeat_id "L2a,chr11,94975635,94975775";repeat_class "LINE";repeat_family "L2";	chr11	94975654	94975748	exon	assembly	+	gene_id "ENSG00000186280.6"; ID "479377"; transcript_id "ENST00000335080.5"; exon "2"; exon_id "chr11.30572"; pos "mid"	0	0	0	0
chr11	95882216	95882535	+	repeat_id "AluSc8,chr11,95882216,95882535";repeat_class "SINE";repeat_family "Alu";	chr11	95882374	95882496	exon	assembly	-	gene_id "ENSG00000087053.18"; ID "479612"; transcript_id "transcript97200.chr11.nnic"; exon "4"; exon_id "chr11.30730"; pos "mid"	8.196	0	0	0
chr11	95914222	95914320	-	repeat_id "X6a_DNA,chr11,95914222,95914320";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	95914242	95914312	exon	assembly	-	gene_id "ENSG00000087053.18"; ID "479610"; transcript_id "transcript97200.chr11.nnic"; exon "2"; exon_id "chr11.30728"; pos "mid"	3.58575	0	0	0
chr11	95914222	95914320	-	repeat_id "X6a_DNA,chr11,95914222,95914320";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	95914242	95914312	exon	assembly	-	gene_id "ENSG00000087053.18"; ID "479628"; transcript_id "ENST00000352297.11"; exon "2"; exon_id "chr11.30728"; pos "mid"	3.58575	0	0	0
chr11	95914222	95914320	-	repeat_id "X6a_DNA,chr11,95914222,95914320";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr11	95914242	95914312	exon	assembly	-	gene_id "ENSG00000087053.18"; ID "479645"; transcript_id "ENST00000409459.5"; exon "2"; exon_id "chr11.30728"; pos "mid"	3.58575	0	0	0
chr11	96385850	96386353	+	repeat_id "MARNA,chr11,96385850,96386353";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr11	96386254	96386293	exon	assembly	-	gene_id "ENSG00000149231.11"; ID "479920"; transcript_id "transcript98205.chr11.nic"; exon "3"; exon_id "chr11.30901"; pos "mid"	17.4165	27.4614	0	37.4665
chr11	96387409	96387600	-	repeat_id "MIRc,chr11,96387409,96387600";repeat_class "SINE";repeat_family "MIR";	chr11	96387530	96387613	exon	assembly	-	gene_id "ENSG00000149231.11"; ID "479919"; transcript_id "transcript98205.chr11.nic"; exon "2"; exon_id "chr11.30900"; pos "mid"	74.2755	144.427	43.0993	136.063
chr11	102067059	102067366	+	repeat_id "AluJb,chr11,102067059,102067366";repeat_class "SINE";repeat_family "Alu";	chr11	102067225	102067386	exon	assembly	+	gene_id "ENSG00000137691.12"; ID "480057"; transcript_id "transcript98538.chr11.nnic"; exon "5"; exon_id "chr11.31161"; pos "last"	101.425	0	0	12.8175
chr11	104968962	104971180	+	repeat_id "L1PA10,chr11,104968962,104971180";repeat_class "LINE";repeat_family "L1";	chr11	104969250	104969591	exon	assembly	-	gene_id "ENSG00000196954.13"; ID "480836"; transcript_id "transcript100050.chr11.nic"; exon "1"; exon_id "chr11.31758"; pos "first"	0	0	36.4686	0
chr11	108224553	108224901	+	repeat_id "L2a,chr11,108224553,108224901";repeat_class "LINE";repeat_family "L2";	chr11	108224784	108224871	exon	assembly	+	gene_id "ENSG00000149311.18"; ID "481479"; transcript_id "ENST00000452508.6"; exon "2"; exon_id "chr11.32369"; pos "mid"	0	0	0	0
chr11	116756250	116756522	+	repeat_id "AluSx1,chr11,116756250,116756522";repeat_class "SINE";repeat_family "Alu";	chr11	116756228	116756343	exon	assembly	-	gene_id "ENSG00000137656.11"; ID "483402"; transcript_id "transcript106312.chr11.nnic"; exon "10"; exon_id "chr11.34249"; pos "mid"	0	0	0	0
chr11	117363760	117364064	-	repeat_id "AluJr4,chr11,117363760,117364064";repeat_class "SINE";repeat_family "Alu";	chr11	117363955	117364043	exon	assembly	+	gene_id "ENSG00000110274.15"; ID "483965"; transcript_id "ENST00000533706.5"; exon "1"; exon_id "chr11.34628"; pos "first"	0	0	0	0
chr11	119046396	119046589	-	repeat_id "OldhAT1,chr11,119046396,119046589";repeat_class "DNA";repeat_family "hAT-Ac";	chr11	119046417	119046467	exon	assembly	-	gene_id "ENSG00000149428.18"; ID "484804"; transcript_id "transcript109926.chr11.nic"; exon "24"; exon_id "chr11.35787"; pos "mid"	80.9349	34.0727	120.457	89.7224
chr11	119046396	119046589	-	repeat_id "OldhAT1,chr11,119046396,119046589";repeat_class "DNA";repeat_family "hAT-Ac";	chr11	119046417	119046467	exon	assembly	-	gene_id "ENSG00000149428.18"; ID "484856"; transcript_id "ENST00000617285.4"; exon "24"; exon_id "chr11.35787"; pos "mid"	80.9349	34.0727	120.457	89.7224
chr11	119046396	119046589	-	repeat_id "OldhAT1,chr11,119046396,119046589";repeat_class "DNA";repeat_family "hAT-Ac";	chr11	119046417	119046467	exon	assembly	-	gene_id "ENSG00000149428.18"; ID "484882"; transcript_id "ENST00000612687.4"; exon "23"; exon_id "chr11.35787"; pos "mid"	80.9349	34.0727	120.457	89.7224
chr11	119394673	119395304	-	repeat_id "L1M1,chr11,119394673,119395304";repeat_class "LINE";repeat_family "L1";	chr11	119394981	119395154	exon	assembly	+	gene_id "ENSG00000245248.7"; ID "485596"; transcript_id "transcript111848.chr11.nnic"; exon "2"; exon_id "chr11.36423"; pos "mid"	0	0	0	0
chr11	119394673	119395304	-	repeat_id "L1M1,chr11,119394673,119395304";repeat_class "LINE";repeat_family "L1";	chr11	119394981	119395154	exon	assembly	+	gene_id "ENSG00000245248.7"; ID "485608"; transcript_id "transcript111858.chr11.nic"; exon "2"; exon_id "chr11.36423"; pos "mid"	0	0	0	0
chr11	119421288	119421468	-	repeat_id "L1MB2,chr11,119421288,119421468";repeat_class "LINE";repeat_family "L1";	chr11	119421350	119421444	exon	assembly	-	gene_id "ENSG00000154096.13"; ID "485626"; transcript_id "transcript111482.chr11.nnic"; exon "2"; exon_id "chr11.36446"; pos "mid"	0	0	0	0
chr11	125656216	125656359	+	repeat_id "FRAM,chr11,125656216,125656359";repeat_class "SINE";repeat_family "Alu";	chr11	125656206	125656335	exon	assembly	+	gene_id "ENSG00000149554.12"; ID "487761"; transcript_id "ENST00000498122.4"; exon "4"; exon_id "chr11.38213"; pos "mid"	0	0	44.2046	104.512
chr11	125675897	125676206	-	repeat_id "AluSq2,chr11,125675897,125676206";repeat_class "SINE";repeat_family "Alu";	chr11	125675928	125676255	exon	assembly	+	gene_id "ENSG00000149554.12"; ID "487728"; transcript_id "ENST00000428830.6"; exon "14"; exon_id "chr11.38211"; pos "last"	0	0	0	0
chr11	125675897	125676206	-	repeat_id "AluSq2,chr11,125675897,125676206";repeat_class "SINE";repeat_family "Alu";	chr11	125675928	125676255	exon	assembly	+	gene_id "ENSG00000149554.12"; ID "487762"; transcript_id "ENST00000498122.4"; exon "5"; exon_id "chr11.38211"; pos "last"	0	0	0	0
chr11	126472237	126472584	-	repeat_id "MLT1A0,chr11,126472237,126472584";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr11	126472289	126472357	exon	assembly	-	gene_id "ENSG00000149571.11"; ID "488202"; transcript_id "transcript120669.chr11.nnic"; exon "5"; exon_id "chr11.38737"; pos "last"	0	0	0	0
chr11	129894349	129894445	+	repeat_id "MIR3,chr11,129894349,129894445";repeat_class "SINE";repeat_family "MIR";	chr11	129894359	129894438	exon	assembly	-	gene_id "ENSG00000170322.14"; ID "488732"; transcript_id "transcript121284.chr11.nic"; exon "2"; exon_id "chr11.39104"; pos "mid"	33.296	23.9018	0	0
chr11	129894349	129894445	+	repeat_id "MIR3,chr11,129894349,129894445";repeat_class "SINE";repeat_family "MIR";	chr11	129894359	129894438	exon	assembly	-	gene_id "ENSG00000170322.14"; ID "488760"; transcript_id "transcript121285.chr11.nic"; exon "2"; exon_id "chr11.39104"; pos "mid"	33.296	23.9018	0	0
chr11	129894349	129894445	+	repeat_id "MIR3,chr11,129894349,129894445";repeat_class "SINE";repeat_family "MIR";	chr11	129894359	129894441	exon	assembly	-	gene_id "ENSG00000170322.14"; ID "488829"; transcript_id "ENST00000446488.7"; exon "1"; exon_id "chr11.39138"; pos "first"	33.296	23.9018	0	0
chr12	3331728	3332283	-	repeat_id "MLT2A2,chr12,3331728,3332283";repeat_class "LTR";repeat_family "ERVL";	chr12	3331773	3332392	exon	assembly	-	gene_id "ENSG00000250770.3"; ID "491197"; transcript_id "transcript3918.chr12.nic"; exon "2"; exon_id "chr12.1425"; pos "last"	0	0	0	0
chr12	4544641	4545594	+	repeat_id "L1MB7,chr12,4544641,4545594";repeat_class "LINE";repeat_family "L1";	chr12	4545219	4545312	exon	assembly	+	gene_id "ENSG00000111247.14"; ID "491488"; transcript_id "ENST00000442992.6"; exon "4"; exon_id "chr12.1668"; pos "mid"	38.4188	0	0	0
chr12	4545600	4545859	+	repeat_id "L2d2,chr12,4545600,4545859";repeat_class "LINE";repeat_family "L2";	chr12	4545782	4545832	exon	assembly	+	gene_id "ENSG00000111247.14"; ID "491453"; transcript_id "ENST00000228843.13"; exon "4"; exon_id "chr12.1655"; pos "mid"	36.8816	16.7821	0	0
chr12	4545600	4545859	+	repeat_id "L2d2,chr12,4545600,4545859";repeat_class "LINE";repeat_family "L2";	chr12	4545782	4545832	exon	assembly	+	gene_id "ENSG00000111247.14"; ID "491489"; transcript_id "ENST00000442992.6"; exon "5"; exon_id "chr12.1655"; pos "mid"	36.8816	16.7821	0	0
chr12	6224865	6225192	-	repeat_id "L1ME3B,chr12,6224865,6225192";repeat_class "LINE";repeat_family "L1";	chr12	6224986	6225213	exon	assembly	+	gene_id "ENSG00000010278.12"; ID "491627"; transcript_id "ENST00000481267.5"; exon "1"; exon_id "chr12.2076"; pos "first"	0	0	0	0
chr12	6448499	6448785	+	repeat_id "AluSc8,chr12,6448499,6448785";repeat_class "SINE";repeat_family "Alu";	chr12	6448640	6448737	exon	assembly	-	gene_id "ENSG00000215039.6"; ID "491925"; transcript_id "transcript6523.chr12.nnic"; exon "2"; exon_id "chr12.2231"; pos "mid"	0	22.3761	0	0
chr12	6448499	6448785	+	repeat_id "AluSc8,chr12,6448499,6448785";repeat_class "SINE";repeat_family "Alu";	chr12	6448640	6448757	exon	assembly	-	gene_id "ENSG00000139190.16"; ID "491948"; transcript_id "transcript6280.chr12.nnic"; exon "5"; exon_id "chr12.2240"; pos "mid"	0	22.3761	0	0
chr12	6448499	6448785	+	repeat_id "AluSc8,chr12,6448499,6448785";repeat_class "SINE";repeat_family "Alu";	chr12	6448640	6448757	exon	assembly	-	gene_id "ENSG00000215039.6"; ID "491937"; transcript_id "ENST00000504270.2"; exon "2"; exon_id "chr12.2240"; pos "mid"	0	22.3761	0	0
chr12	10374006	10374312	-	repeat_id "AluSz,chr12,10374006,10374312";repeat_class "SINE";repeat_family "Alu";	chr12	10374035	10374136	exon	assembly	+	gene_id "ENSG00000245648.1"; ID "494359"; transcript_id "transcript14525.chr12.nnic"; exon "3"; exon_id "chr12.5452"; pos "mid"	0	15.765	0	0
chr12	10374006	10374312	-	repeat_id "AluSz,chr12,10374006,10374312";repeat_class "SINE";repeat_family "Alu";	chr12	10374035	10374136	exon	assembly	+	gene_id "ENSG00000245648.1"; ID "494377"; transcript_id "transcript14543.chr12.nic"; exon "2"; exon_id "chr12.5452"; pos "mid"	0	15.765	0	0
chr12	10973663	10973835	+	repeat_id "L1MEg2,chr12,10973663,10973835";repeat_class "LINE";repeat_family "L1";	chr12	10973655	10973721	exon	assembly	-	gene_id "ENSG00000111215.11"; ID "494653"; transcript_id "transcript15279.chr12.nnic"; exon "2"; exon_id "chr12.5706"; pos "mid"	0	16.7821	0	0
chr12	10973663	10973835	+	repeat_id "L1MEg2,chr12,10973663,10973835";repeat_class "LINE";repeat_family "L1";	chr12	10973655	10973721	exon	assembly	-	gene_id "ENSG00000111215.11"; ID "494665"; transcript_id "ENST00000535024.5"; exon "3"; exon_id "chr12.5706"; pos "mid"	0	16.7821	0	0
chr12	10973663	10973835	+	repeat_id "L1MEg2,chr12,10973663,10973835";repeat_class "LINE";repeat_family "L1";	chr12	10973655	10973721	exon	assembly	-	gene_id "ENSG00000212127.5"; ID "494717"; transcript_id "ENST00000381852.4"; exon "4"; exon_id "chr12.5706"; pos "mid"	0	16.7821	0	0
chr12	10973663	10973835	+	repeat_id "L1MEg2,chr12,10973663,10973835";repeat_class "LINE";repeat_family "L1";	chr12	10973655	10973721	exon	assembly	-	gene_id "ENSG00000231887.6"; ID "494633"; transcript_id "transcript15387.chr12.nic"; exon "3"; exon_id "chr12.5706"; pos "mid"	0	16.7821	0	0
chr12	11034633	11034880	+	repeat_id "AluJr,chr12,11034633,11034880";repeat_class "SINE";repeat_family "Alu";	chr12	11034782	11034885	exon	assembly	-	gene_id "ENSG00000212127.5"; ID "494716"; transcript_id "ENST00000381852.4"; exon "3"; exon_id "chr12.5726"; pos "mid"	0	0	0	0
chr12	11034633	11034880	+	repeat_id "AluJr,chr12,11034633,11034880";repeat_class "SINE";repeat_family "Alu";	chr12	11034782	11034885	exon	assembly	-	gene_id "ENSG00000275778.1"; ID "494680"; transcript_id "transcript15414.chr12.nnic"; exon "3"; exon_id "chr12.5726"; pos "mid"	0	0	0	0
chr12	12927678	12927956	+	repeat_id "MER50,chr12,12927678,12927956";repeat_class "LTR";repeat_family "ERV1";	chr12	12927758	12927803	exon	assembly	+	gene_id "ENSG00000247498.9"; ID "495523"; transcript_id "ENST00000543515.6"; exon "1"; exon_id "chr12.6335"; pos "first"	0	0	0	29.5789
chr12	12966758	12967056	+	repeat_id "AluSz6,chr12,12966758,12967056";repeat_class "SINE";repeat_family "Alu";	chr12	12966759	12966857	exon	assembly	+	gene_id "ENSG00000247498.9"; ID "495509"; transcript_id "transcript17302.chr12.nnic"; exon "2"; exon_id "chr12.6328"; pos "mid"	0	0	0	37.4667
chr12	12966758	12967056	+	repeat_id "AluSz6,chr12,12966758,12967056";repeat_class "SINE";repeat_family "Alu";	chr12	12966759	12966897	exon	assembly	+	gene_id "ENSG00000247498.9"; ID "495514"; transcript_id "transcript17316.chr12.nnic"; exon "2"; exon_id "chr12.6331"; pos "mid"	0	0	0	37.4667
chr12	14811243	14811447	+	repeat_id "Charlie15a,chr12,14811243,14811447";repeat_class "DNA";repeat_family "hAT-Charlie";	chr12	14811234	14811392	exon	assembly	+	gene_id "ENSG00000182993.3"; ID "495934"; transcript_id "transcript18343.chr12.nnic"; exon "2"; exon_id "chr12.6754"; pos "mid"	0	0	0	0
chr12	22472723	22472802	-	repeat_id "Penelope1_Vert,chr12,22472723,22472802";repeat_class "LINE";repeat_family "Penelope";	chr12	22472744	22472807	exon	assembly	-	gene_id "ENSG00000111731.12"; ID "497303"; transcript_id "ENST00000333957.8"; exon "17"; exon_id "chr12.8107"; pos "mid"	33.2959	16.2736	71.8323	86.7648
chr12	28225762	28225932	+	repeat_id "MLT1L,chr12,28225762,28225932";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	28225795	28225861	exon	assembly	+	gene_id "ENSG00000123106.10"; ID "498657"; transcript_id "ENST00000545336.5"; exon "2"; exon_id "chr12.9358"; pos "mid"	0	0	0	0
chr12	29332809	29333049	-	repeat_id "MIR,chr12,29332809,29333049";repeat_class "SINE";repeat_family "MIR";	chr12	29332845	29332908	exon	assembly	+	gene_id "ENSG00000064763.10"; ID "498808"; transcript_id "ENST00000547759.1"; exon "2"; exon_id "chr12.9467"; pos "mid"	0	0	0	0
chr12	29640285	29641820	+	repeat_id "L1PB1,chr12,29640285,29641820";repeat_class "LINE";repeat_family "L1";	chr12	29640560	29641238	exon	assembly	-	gene_id "ENSG00000133687.15"; ID "498909"; transcript_id "ENST00000319685.12"; exon "1"; exon_id "chr12.9605"; pos "first"	0	0	0	0
chr12	29640293	29642617	+	repeat_id "L1PBa,chr12,29640293,29642617";repeat_class "LINE";repeat_family "L1";	chr12	29640560	29641238	exon	assembly	-	gene_id "ENSG00000133687.15"; ID "498909"; transcript_id "ENST00000319685.12"; exon "1"; exon_id "chr12.9605"; pos "first"	0	0	0	0
chr12	30800282	30800673	+	repeat_id "MSTD,chr12,30800282,30800673";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	30800534	30800601	exon	assembly	+	gene_id "ENSG00000235884.3"; ID "499296"; transcript_id "ENST00000547804.1"; exon "4"; exon_id "chr12.9847"; pos "mid"	0	0	0	0
chr12	31086059	31086411	+	repeat_id "L2d,chr12,31086059,31086411";repeat_class "LINE";repeat_family "L2";	chr12	31086014	31086408	exon	assembly	+	gene_id "ENSG00000013573.16"; ID "499378"; transcript_id "transcript27874.chr12.nnic"; exon "6"; exon_id "chr12.9918"; pos "last"	12.2939	0	0	0
chr12	31304978	31305696	-	repeat_id "PRIMA4-int,chr12,31304978,31305696";repeat_class "LTR";repeat_family "ERV1";	chr12	31304982	31305123	exon	assembly	-	gene_id "ENSG00000139146.13"; ID "499586"; transcript_id "transcript28142.chr12.nnic"; exon "2"; exon_id "chr12.10111"; pos "mid"	105.011	34.5811	0	102.54
chr12	43760108	43760983	+	repeat_id "L2a,chr12,43760108,43760983";repeat_class "LINE";repeat_family "L2";	chr12	43760925	43760972	exon	assembly	+	gene_id "ENSG00000198001.13"; ID "501474"; transcript_id "transcript32009.chr12.nic"; exon "2"; exon_id "chr12.11788"; pos "mid"	11.7817	0	0	0
chr12	46469981	46470323	+	repeat_id "MLT1B,chr12,46469981,46470323";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	46470153	46470262	exon	assembly	+	gene_id "ENSG00000257261.5"; ID "502523"; transcript_id "transcript34261.chr12.nnic"; exon "3"; exon_id "chr12.12374"; pos "mid"	0	19.3249	0	0
chr12	46652407	46652659	+	repeat_id "LTR79,chr12,46652407,46652659";repeat_class "LTR";repeat_family "ERVL";	chr12	46652390	46652577	exon	assembly	+	gene_id "ENSG00000257261.5"; ID "502524"; transcript_id "transcript34261.chr12.nnic"; exon "4"; exon_id "chr12.12375"; pos "last"	0	0	0	0
chr12	49324226	49324374	+	repeat_id "FLAM_A,chr12,49324226,49324374";repeat_class "SINE";repeat_family "Alu";	chr12	49324212	49324372	exon	assembly	+	gene_id "ENSG00000135451.12"; ID "504293"; transcript_id "transcript40040.chr12.nnic"; exon "4"; exon_id "chr12.14062"; pos "last"	0	1.0171	28.7329	29.5788
chr12	49371036	49371545	-	repeat_id "L1MB3,chr12,49371036,49371545";repeat_class "LINE";repeat_family "L1";	chr12	49371228	49371290	exon	assembly	+	gene_id "ENSG00000123352.17"; ID "504468"; transcript_id "ENST00000553127.5"; exon "2"; exon_id "chr12.14179"; pos "mid"	0	16.7821	41.9942	0
chr12	49386466	49387354	-	repeat_id "L2a,chr12,49386466,49387354";repeat_class "LINE";repeat_family "L2";	chr12	49387054	49387137	exon	assembly	+	gene_id "ENSG00000123352.17"; ID "504469"; transcript_id "ENST00000553127.5"; exon "3"; exon_id "chr12.14185"; pos "mid"	0	0	0	0
chr12	50112948	50113013	-	repeat_id "AluJb,chr12,50112948,50113013";repeat_class "SINE";repeat_family "Alu";	chr12	50112958	50113004	exon	assembly	+	gene_id "ENSG00000178449.8"; ID "505253"; transcript_id "transcript42982.chr12.nnic"; exon "2"; exon_id "chr12.14792"; pos "mid"	0	0	0	0
chr12	50114771	50115065	-	repeat_id "AluSc,chr12,50114771,50115065";repeat_class "SINE";repeat_family "Alu";	chr12	50114805	50114910	exon	assembly	+	gene_id "ENSG00000178449.8"; ID "505257"; transcript_id "transcript42983.chr12.nnic"; exon "2"; exon_id "chr12.14795"; pos "mid"	0	0	0	0
chr12	50118487	50118772	+	repeat_id "AluY,chr12,50118487,50118772";repeat_class "SINE";repeat_family "Alu";	chr12	50118493	50118552	exon	assembly	+	gene_id "ENSG00000178449.8"; ID "505268"; transcript_id "ENST00000550654.1"; exon "2"; exon_id "chr12.14801"; pos "mid"	0	0	0	0
chr12	50133792	50134089	+	repeat_id "AluSg,chr12,50133792,50134089";repeat_class "SINE";repeat_family "Alu";	chr12	50133933	50134068	exon	assembly	-	gene_id "ENSG00000139624.12"; ID "505296"; transcript_id "transcript42734.chr12.nnic"; exon "10"; exon_id "chr12.14821"; pos "mid"	13.8307	18.3078	0	0
chr12	51251299	51251614	+	repeat_id "AluJr,chr12,51251299,51251614";repeat_class "SINE";repeat_family "Alu";	chr12	51251465	51251583	exon	assembly	-	gene_id "ENSG00000170545.16"; ID "506421"; transcript_id "ENST00000380103.4"; exon "2"; exon_id "chr12.15455"; pos "mid"	0	0	0	0
chr12	53296405	53296712	-	repeat_id "AluSx4,chr12,53296405,53296712";repeat_class "SINE";repeat_family "Alu";	chr12	53296430	53296467	exon	assembly	+	gene_id "ENSG00000123349.13"; ID "507702"; transcript_id "ENST00000549759.1"; exon "3"; exon_id "chr12.17181"; pos "mid"	0	10.6795	46.4146	0
chr12	53296405	53296712	-	repeat_id "AluSx4,chr12,53296405,53296712";repeat_class "SINE";repeat_family "Alu";	chr12	53296430	53296551	exon	assembly	+	gene_id "ENSG00000123349.13"; ID "507686"; transcript_id "ENST00000550880.5"; exon "2"; exon_id "chr12.17175"; pos "mid"	0	10.6795	46.4146	0
chr12	53296405	53296712	-	repeat_id "AluSx4,chr12,53296405,53296712";repeat_class "SINE";repeat_family "Alu";	chr12	53296454	53296551	exon	assembly	+	gene_id "ENSG00000123349.13"; ID "507692"; transcript_id "ENST00000547130.5"; exon "2"; exon_id "chr12.17177"; pos "mid"	0	10.6795	46.4146	0
chr12	53464681	53465035	-	repeat_id "LFSINE_Vert,chr12,53464681,53465035";repeat_class "SINE";repeat_family "tRNA";	chr12	53464760	53464852	exon	assembly	+	gene_id "ENSG00000197111.15"; ID "507939"; transcript_id "ENST00000359462.9"; exon "9"; exon_id "chr12.17394"; pos "mid"	594.718	320.893	583.498	228.744
chr12	53464681	53465035	-	repeat_id "LFSINE_Vert,chr12,53464681,53465035";repeat_class "SINE";repeat_family "tRNA";	chr12	53464760	53464852	exon	assembly	+	gene_id "ENSG00000197111.15"; ID "507999"; transcript_id "ENST00000552296.6"; exon "9"; exon_id "chr12.17394"; pos "mid"	594.718	320.893	583.498	228.744
chr12	53464681	53465035	-	repeat_id "LFSINE_Vert,chr12,53464681,53465035";repeat_class "SINE";repeat_family "tRNA";	chr12	53464760	53464852	exon	assembly	+	gene_id "ENSG00000197111.15"; ID "508027"; transcript_id "ENST00000439930.7"; exon "8"; exon_id "chr12.17394"; pos "mid"	594.718	320.893	583.498	228.744
chr12	53464681	53465035	-	repeat_id "LFSINE_Vert,chr12,53464681,53465035";repeat_class "SINE";repeat_family "tRNA";	chr12	53464760	53464852	exon	assembly	+	gene_id "ENSG00000197111.15"; ID "508053"; transcript_id "ENST00000550585.5"; exon "5"; exon_id "chr12.17394"; pos "mid"	594.718	320.893	583.498	228.744
chr12	53464681	53465035	-	repeat_id "LFSINE_Vert,chr12,53464681,53465035";repeat_class "SINE";repeat_family "tRNA";	chr12	53464760	53464852	exon	assembly	+	gene_id "ENSG00000197111.15"; ID "508063"; transcript_id "ENST00000547859.2"; exon "3"; exon_id "chr12.17394"; pos "mid"	594.718	320.893	583.498	228.744
chr12	54187799	54187993	-	repeat_id "L2d2,chr12,54187799,54187993";repeat_class "LINE";repeat_family "L2";	chr12	54187819	54187905	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508573"; transcript_id "ENST00000513838.5"; exon "3"; exon_id "chr12.17846"; pos "mid"	132.672	41.7009	0	132.119
chr12	54187799	54187993	-	repeat_id "L2d2,chr12,54187799,54187993";repeat_class "LINE";repeat_family "L2";	chr12	54187819	54187905	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508579"; transcript_id "transcript56738.chr12.nic"; exon "2"; exon_id "chr12.17846"; pos "mid"	132.672	41.7009	0	132.119
chr12	54187799	54187993	-	repeat_id "L2d2,chr12,54187799,54187993";repeat_class "LINE";repeat_family "L2";	chr12	54187819	54187905	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508621"; transcript_id "ENST00000514685.5"; exon "2"; exon_id "chr12.17846"; pos "mid"	132.672	41.7009	0	132.119
chr12	54187799	54187993	-	repeat_id "L2d2,chr12,54187799,54187993";repeat_class "LINE";repeat_family "L2";	chr12	54187819	54187905	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508627"; transcript_id "ENST00000337581.7"; exon "2"; exon_id "chr12.17846"; pos "mid"	132.672	41.7009	0	132.119
chr12	54188346	54188651	+	repeat_id "AluSg,chr12,54188346,54188651";repeat_class "SINE";repeat_family "Alu";	chr12	54188511	54188596	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508572"; transcript_id "ENST00000513838.5"; exon "2"; exon_id "chr12.17845"; pos "mid"	17.9286	28.4786	0	20.7052
chr12	54188346	54188651	+	repeat_id "AluSg,chr12,54188346,54188651";repeat_class "SINE";repeat_family "Alu";	chr12	54188515	54188596	exon	assembly	-	gene_id "ENSG00000123415.15"; ID "508585"; transcript_id "transcript56740.chr12.nic"; exon "2"; exon_id "chr12.17853"; pos "mid"	17.9286	28.4786	0	20.7052
chr12	56312223	56312520	-	repeat_id "AluJb,chr12,56312223,56312520";repeat_class "SINE";repeat_family "Alu";	chr12	56312407	56312499	exon	assembly	+	gene_id "ENSG00000257303.1"; ID "510307"; transcript_id "ENST00000549565.1"; exon "2"; exon_id "chr12.19612"; pos "mid"	0	0	0	0
chr12	56312563	56312869	-	repeat_id "AluSp,chr12,56312563,56312869";repeat_class "SINE";repeat_family "Alu";	chr12	56312523	56312885	exon	assembly	-	gene_id "ENSG00000257727.5"; ID "510346"; transcript_id "ENST00000551276.1"; exon "3"; exon_id "chr12.19631"; pos "last"	0	0	0	0
chr12	56502328	56502627	-	repeat_id "AluSx,chr12,56502328,56502627";repeat_class "SINE";repeat_family "Alu";	chr12	56502344	56502465	exon	assembly	+	gene_id "ENSG00000176422.13"; ID "510641"; transcript_id "transcript65890.chr12.nnic"; exon "2"; exon_id "chr12.19943"; pos "mid"	0	0	0	0
chr12	57531961	57532134	+	repeat_id "MamRTE1,chr12,57531961,57532134";repeat_class "LINE";repeat_family "RTE-BovB";	chr12	57532015	57532106	exon	assembly	-	gene_id "ENSG00000175203.15"; ID "512249"; transcript_id "ENST00000548249.5"; exon "13"; exon_id "chr12.21231"; pos "mid"	128.574	62.0427	150.295	142.965
chr12	57531961	57532134	+	repeat_id "MamRTE1,chr12,57531961,57532134";repeat_class "LINE";repeat_family "RTE-BovB";	chr12	57532015	57532106	exon	assembly	-	gene_id "ENSG00000175203.15"; ID "512269"; transcript_id "ENST00000434715.7"; exon "15"; exon_id "chr12.21231"; pos "mid"	128.574	62.0427	150.295	142.965
chr12	57791959	57792258	+	repeat_id "AluSz,chr12,57791959,57792258";repeat_class "SINE";repeat_family "Alu";	chr12	57791965	57792027	exon	assembly	+	gene_id "ENSG00000123297.17"; ID "512798"; transcript_id "ENST00000323833.12"; exon "5"; exon_id "chr12.21766"; pos "mid"	0	0	0	0
chr12	57931475	57931762	-	repeat_id "MLT1K,chr12,57931475,57931762";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	57931528	57931737	exon	assembly	-	gene_id "ENSG00000257698.1"; ID "512899"; transcript_id "ENST00000551421.1"; exon "2"; exon_id "chr12.21919"; pos "last"	0	0	0	0
chr12	57931475	57931762	-	repeat_id "MLT1K,chr12,57931475,57931762";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	57931569	57931737	exon	assembly	-	gene_id "ENSG00000257698.1"; ID "512902"; transcript_id "ENST00000547492.1"; exon "2"; exon_id "chr12.21921"; pos "last"	0	0	0	0
chr12	63782209	63783183	-	repeat_id "MLT1D-int,chr12,63782209,63783183";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	63782541	63782704	exon	assembly	+	gene_id "ENSG00000118600.11"; ID "513625"; transcript_id "ENST00000543342.5"; exon "3"; exon_id "chr12.22479"; pos "mid"	0	0	0	0
chr12	64227681	64227985	-	repeat_id "AluJr,chr12,64227681,64227985";repeat_class "SINE";repeat_family "Alu";	chr12	64227874	64227985	exon	assembly	+	gene_id "ENSG00000243024.6"; ID "513862"; transcript_id "transcript76870.chr12.nnic"; exon "2"; exon_id "chr12.22617"; pos "mid"	0	0	0	0
chr12	64495981	64496261	-	repeat_id "Charlie8,chr12,64495981,64496261";repeat_class "DNA";repeat_family "hAT-Charlie";	chr12	64495982	64496089	exon	assembly	+	gene_id "ENSG00000183735.9"; ID "514013"; transcript_id "transcript76624.chr12.nnic"; exon "16"; exon_id "chr12.22693"; pos "mid"	0	0	0	0
chr12	65610634	65610933	-	repeat_id "AluSz,chr12,65610634,65610933";repeat_class "SINE";repeat_family "Alu";	chr12	65610655	65610776	exon	assembly	+	gene_id "ENSG00000256268.1"; ID "514468"; transcript_id "transcript77734.chr12.nnic"; exon "3"; exon_id "chr12.23067"; pos "mid"	9.22046	18.3078	0	0
chr12	65775680	65776140	-	repeat_id "MLT1J,chr12,65775680,65776140";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	65775776	65775879	exon	assembly	-	gene_id "ENSG00000241749.4"; ID "514545"; transcript_id "transcript78147.chr12.nnic"; exon "2"; exon_id "chr12.23102"; pos "mid"	2.049	0	0	0
chr12	68760058	68760191	+	repeat_id "FLAM_C,chr12,68760058,68760191";repeat_class "SINE";repeat_family "Alu";	chr12	68760040	68760196	exon	assembly	+	gene_id "ENSG00000175782.9"; ID "515416"; transcript_id "ENST00000319429.6"; exon "4"; exon_id "chr12.23773"; pos "last"	0	0	26.5226	0
chr12	75487740	75488253	-	repeat_id "MER41A,chr12,75487740,75488253";repeat_class "LTR";repeat_family "ERV1";	chr12	75487739	75487809	exon	assembly	+	gene_id "ENSG00000139278.9"; ID "516712"; transcript_id "transcript85063.chr12.nic"; exon "3"; exon_id "chr12.25065"; pos "mid"	0	0	0	0
chr12	76292128	76292576	+	repeat_id "HERVH-int,chr12,76292128,76292576";repeat_class "LTR";repeat_family "ERV1";	chr12	76292116	76292270	exon	assembly	+	gene_id "ENSG00000257219.5"; ID "517007"; transcript_id "transcript87422.chr12.nnic"; exon "2"; exon_id "chr12.25205"; pos "mid"	30.7348	57.4657	0	36.4805
chr12	76292637	76296935	+	repeat_id "HERVH-int,chr12,76292637,76296935";repeat_class "LTR";repeat_family "ERV1";	chr12	76293813	76294005	exon	assembly	+	gene_id "ENSG00000257219.5"; ID "517008"; transcript_id "transcript87422.chr12.nnic"; exon "3"; exon_id "chr12.25206"; pos "mid"	0	17.7992	36.4686	0
chr12	76297373	76297783	+	repeat_id "LTR7,chr12,76297373,76297783";repeat_class "LTR";repeat_family "ERV1";	chr12	76297363	76297739	exon	assembly	+	gene_id "ENSG00000257219.5"; ID "517009"; transcript_id "transcript87422.chr12.nnic"; exon "4"; exon_id "chr12.25207"; pos "last"	0	0	0	0
chr12	85016264	85016785	-	repeat_id "MER44B,chr12,85016264,85016785";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr12	85016474	85016574	exon	assembly	-	gene_id "ENSG00000231738.10"; ID "518604"; transcript_id "transcript90305.chr12.nnic"; exon "1"; exon_id "chr12.26469"; pos "first"	0	0	0	0
chr12	93414472	93414957	+	repeat_id "L2a,chr12,93414472,93414957";repeat_class "LINE";repeat_family "L2";	chr12	93414533	93414737	exon	assembly	-	gene_id "ENSG00000177889.9"; ID "519557"; transcript_id "transcript92924.chr12.nnic"; exon "2"; exon_id "chr12.27276"; pos "mid"	0	0	0	0
chr12	93470461	93470933	-	repeat_id "L1PA17,chr12,93470461,93470933";repeat_class "LINE";repeat_family "L1";	chr12	93470486	93470505	exon	assembly	+	gene_id "ENSG00000198015.12"; ID "519585"; transcript_id "ENST00000551396.5"; exon "3"; exon_id "chr12.27330"; pos "mid"	0	0	0	0
chr12	93470461	93470933	-	repeat_id "L1PA17,chr12,93470461,93470933";repeat_class "LINE";repeat_family "L1";	chr12	93470486	93470590	exon	assembly	+	gene_id "ENSG00000198015.12"; ID "519606"; transcript_id "ENST00000358678.7"; exon "3"; exon_id "chr12.27337"; pos "mid"	0	0	0	0
chr12	94996904	94997043	+	repeat_id "MIR3,chr12,94996904,94997043";repeat_class "SINE";repeat_family "MIR";	chr12	94996904	94996976	exon	assembly	-	gene_id "ENSG00000184752.12"; ID "519940"; transcript_id "ENST00000551991.5"; exon "3"; exon_id "chr12.27641"; pos "mid"	0	0	0	0
chr12	94997287	94997451	+	repeat_id "MIRb,chr12,94997287,94997451";repeat_class "SINE";repeat_family "MIR";	chr12	94997308	94997447	exon	assembly	-	gene_id "ENSG00000184752.12"; ID "519944"; transcript_id "ENST00000550187.5"; exon "1"; exon_id "chr12.27642"; pos "first"	0	0	0	0
chr12	100591633	100591856	-	repeat_id "MIRb,chr12,100591633,100591856";repeat_class "SINE";repeat_family "MIR";	chr12	100591736	100591856	exon	assembly	+	gene_id "ENSG00000139354.10"; ID "522006"; transcript_id "ENST00000547754.5"; exon "2"; exon_id "chr12.29189"; pos "mid"	89.6433	75.2647	0	46.3402
chr12	101890066	101890379	-	repeat_id "AluSx,chr12,101890066,101890379";repeat_class "SINE";repeat_family "Alu";	chr12	101890100	101890173	exon	assembly	+	gene_id "ENSG00000136048.13"; ID "522393"; transcript_id "transcript101528.chr12.nnic"; exon "2"; exon_id "chr12.29658"; pos "mid"	0	0	0	0
chr12	102154524	102155160	+	repeat_id "MER4E1,chr12,102154524,102155160";repeat_class "LTR";repeat_family "ERV1";	chr12	102154827	102155163	exon	assembly	+	gene_id "ENSG00000185480.11"; ID "522583"; transcript_id "transcript102099.chr12.nnic"; exon "5"; exon_id "chr12.29755"; pos "mid"	2.56125	0	0	0
chr12	104290979	104291087	-	repeat_id "FLAM_C,chr12,104290979,104291087";repeat_class "SINE";repeat_family "Alu";	chr12	104290993	104291104	exon	assembly	+	gene_id "ENSG00000198431.15"; ID "523130"; transcript_id "ENST00000526390.5"; exon "4"; exon_id "chr12.30366"; pos "mid"	0	0	0	0
chr12	106345661	106346211	-	repeat_id "MLT1H,chr12,106345661,106346211";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	106345740	106346035	exon	assembly	-	gene_id "novel_gene_chr12_105943"; ID "523842"; transcript_id "transcript105942.chr12.nnic"; exon "1"; exon_id "chr12.30802"; pos "first"	0	0	0	0
chr12	109104923	109105213	-	repeat_id "AluSx1,chr12,109104923,109105213";repeat_class "SINE";repeat_family "Alu";	chr12	109105096	109105215	exon	assembly	+	gene_id "ENSG00000076248.10"; ID "524873"; transcript_id "ENST00000539287.5"; exon "6"; exon_id "chr12.31640"; pos "mid"	0	0	0	0
chr12	110203871	110203951	+	repeat_id "HAL1,chr12,110203871,110203951";repeat_class "LINE";repeat_family "L1";	chr12	110203864	110203950	exon	assembly	+	gene_id "ENSG00000122970.15"; ID "525618"; transcript_id "ENST00000242591.9"; exon "15"; exon_id "chr12.32314"; pos "mid"	0	0	9.94599	0
chr12	110203871	110203951	+	repeat_id "HAL1,chr12,110203871,110203951";repeat_class "LINE";repeat_family "L1";	chr12	110203864	110203950	exon	assembly	+	gene_id "ENSG00000122970.15"; ID "525651"; transcript_id "ENST00000552912.5"; exon "15"; exon_id "chr12.32314"; pos "mid"	0	0	9.94599	0
chr12	111839720	111840110	-	repeat_id "MLT1J1,chr12,111839720,111840110";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	111839768	111840003	exon	assembly	-	gene_id "ENSG00000234608.7"; ID "526811"; transcript_id "ENST00000456429.5"; exon "3"; exon_id "chr12.33139"; pos "last"	0	50.3461	0	34.5086
chr12	111839720	111840110	-	repeat_id "MLT1J1,chr12,111839720,111840110";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	111839770	111840003	exon	assembly	-	gene_id "ENSG00000234608.7"; ID "526826"; transcript_id "ENST00000442119.5"; exon "3"; exon_id "chr12.33145"; pos "last"	0	50.3461	0	34.5086
chr12	113186127	113186312	+	repeat_id "MIRb,chr12,113186127,113186312";repeat_class "SINE";repeat_family "MIR";	chr12	113186185	113186316	exon	assembly	+	gene_id "ENSG00000139405.15"; ID "527617"; transcript_id "ENST00000548278.1"; exon "2"; exon_id "chr12.33887"; pos "mid"	16.392	16.7821	0	24.649
chr12	116399514	116399697	+	repeat_id "MLT1E1A,chr12,116399514,116399697";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	116399495	116399633	exon	assembly	+	gene_id "ENSG00000258346.1"; ID "528488"; transcript_id "transcript118096.chr12.nnic"; exon "3"; exon_id "chr12.34514"; pos "mid"	0	0	0	0
chr12	119671356	119671706	-	repeat_id "THE1D,chr12,119671356,119671706";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr12	119671495	119671668	exon	assembly	+	gene_id "ENSG00000111725.10"; ID "529391"; transcript_id "transcript120422.chr12.nic"; exon "2"; exon_id "chr12.35224"; pos "mid"	0	0	0	0
chr12	120291760	120291903	-	repeat_id "U4,chr12,120291760,120291903";repeat_class "snRNA";repeat_family "snRNA";	chr12	120291763	120291903	exon	assembly	-	gene_id "ENSG00000202538.1"; ID "530024"; transcript_id "ENST00000365668.1"; exon "1"; exon_id "chr12.35716";	28804.1	29443.3	24228.5	51232.7
chr12	120445109	120445405	+	repeat_id "AluSz6,chr12,120445109,120445405";repeat_class "SINE";repeat_family "Alu";	chr12	120445090	120445226	exon	assembly	-	gene_id "ENSG00000170855.3"; ID "530092"; transcript_id "transcript123392.chr12.nnic"; exon "2"; exon_id "chr12.35787"; pos "mid"	0	0	0	0
chr12	121910774	121911029	-	repeat_id "L1MB3,chr12,121910774,121911029";repeat_class "LINE";repeat_family "L1";	chr12	121910942	121911006	exon	assembly	+	gene_id "ENSG00000110801.13"; ID "531454"; transcript_id "ENST00000537407.5"; exon "5"; exon_id "chr12.36718"; pos "mid"	0	0	0	0
chr12	121949930	121950482	+	repeat_id "L1MB5,chr12,121949930,121950482";repeat_class "LINE";repeat_family "L1";	chr12	121950225	121950336	exon	assembly	+	gene_id "ENSG00000158023.9"; ID "531499"; transcript_id "transcript126812.chr12.nnic"; exon "1"; exon_id "chr12.36860"; pos "first"	0	17.2907	38.6789	0
chr12	121949930	121950482	+	repeat_id "L1MB5,chr12,121949930,121950482";repeat_class "LINE";repeat_family "L1";	chr12	121950241	121950336	exon	assembly	+	gene_id "ENSG00000158023.9"; ID "531475"; transcript_id "transcript126794.chr12.nnic"; exon "1"; exon_id "chr12.36859"; pos "first"	0	17.2907	38.6789	0
chr13	20412002	20412273	-	repeat_id "L3,chr13,20412002,20412273";repeat_class "LINE";repeat_family "CR1";	chr13	20412134	20412258	exon	assembly	-	gene_id "ENSG00000165475.13"; ID "536159"; transcript_id "transcript1748.chr13.nnic"; exon "1"; exon_id "chr13.505"; pos "first"	0	0	0	0
chr13	23889835	23890189	+	repeat_id "MLT1C2-int,chr13,23889835,23890189";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	23890000	23890042	exon	assembly	+	gene_id "ENSG00000205861.11"; ID "537096"; transcript_id "transcript4500.chr13.nnic"; exon "2"; exon_id "chr13.1074"; pos "mid"	0	0	0	0
chr13	23889835	23890189	+	repeat_id "MLT1C2-int,chr13,23889835,23890189";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	23890000	23890042	exon	assembly	+	gene_id "ENSG00000205861.11"; ID "537101"; transcript_id "transcript4508.chr13.nnic"; exon "2"; exon_id "chr13.1074"; pos "mid"	0	0	0	0
chr13	23889835	23890189	+	repeat_id "MLT1C2-int,chr13,23889835,23890189";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	23890000	23890042	exon	assembly	+	gene_id "ENSG00000205861.11"; ID "537113"; transcript_id "ENST00000382133.8"; exon "2"; exon_id "chr13.1074"; pos "mid"	0	0	0	0
chr13	27440766	27441196	-	repeat_id "Tigger2a,chr13,27440766,27441196";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr13	27441017	27441077	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538326"; transcript_id "transcript6526.chr13.nic"; exon "3"; exon_id "chr13.1894"; pos "mid"	197.727	37.6327	36.4686	30.5648
chr13	27440766	27441196	-	repeat_id "Tigger2a,chr13,27440766,27441196";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr13	27441017	27441077	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538333"; transcript_id "transcript6528.chr13.nic"; exon "3"; exon_id "chr13.1894"; pos "mid"	197.727	37.6327	36.4686	30.5648
chr13	27440766	27441196	-	repeat_id "Tigger2a,chr13,27440766,27441196";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr13	27441017	27441077	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538375"; transcript_id "ENST00000381116.5"; exon "4"; exon_id "chr13.1894"; pos "mid"	197.727	37.6327	36.4686	30.5648
chr13	27440766	27441196	-	repeat_id "Tigger2a,chr13,27440766,27441196";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr13	27441017	27441077	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538387"; transcript_id "ENST00000485650.5"; exon "3"; exon_id "chr13.1894"; pos "mid"	197.727	37.6327	36.4686	30.5648
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445137	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538357"; transcript_id "ENST00000484342.2"; exon "2"; exon_id "chr13.1907"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445137	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538374"; transcript_id "ENST00000381116.5"; exon "3"; exon_id "chr13.1907"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538325"; transcript_id "transcript6526.chr13.nic"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538332"; transcript_id "transcript6528.chr13.nic"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538339"; transcript_id "transcript6616.chr13.nic"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538345"; transcript_id "transcript6707.chr13.nic"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538361"; transcript_id "ENST00000381120.7"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538381"; transcript_id "ENST00000493719.5"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27444891	27445198	+	repeat_id "L1MC5a,chr13,27444891,27445198";repeat_class "LINE";repeat_family "L1";	chr13	27445088	27445156	exon	assembly	-	gene_id "ENSG00000122033.14"; ID "538386"; transcript_id "ENST00000485650.5"; exon "2"; exon_id "chr13.1893"; pos "mid"	79.3984	8.1368	204.446	75.919
chr13	27649876	27650374	-	repeat_id "MER77B,chr13,27649876,27650374";repeat_class "LTR";repeat_family "ERVL";	chr13	27650042	27650241	exon	assembly	+	gene_id "ENSG00000186184.16"; ID "538463"; transcript_id "ENST00000465887.2"; exon "3"; exon_id "chr13.1959"; pos "mid"	0	0	0	0
chr13	39656767	39656951	+	repeat_id "MIRb,chr13,39656767,39656951";repeat_class "SINE";repeat_family "MIR";	chr13	39656826	39656890	exon	assembly	+	gene_id "ENSG00000133103.16"; ID "540908"; transcript_id "ENST00000356576.8"; exon "2"; exon_id "chr13.4014"; pos "mid"	0	0	0	0
chr13	40951595	40951884	+	repeat_id "AluSz,chr13,40951595,40951884";repeat_class "SINE";repeat_family "Alu";	chr13	40951584	40951701	exon	assembly	-	gene_id "ENSG00000120690.15"; ID "541139"; transcript_id "ENST00000498824.4"; exon "3"; exon_id "chr13.4201"; pos "mid"	0	0	0	0
chr13	41146052	41146979	-	repeat_id "L1MD,chr13,41146052,41146979";repeat_class "LINE";repeat_family "L1";	chr13	41146427	41146640	exon	assembly	+	gene_id "ENSG00000278390.4"; ID "541277"; transcript_id "transcript15645.chr13.nic"; exon "2"; exon_id "chr13.4291"; pos "last"	0	0	0	0
chr13	43838593	43839177	-	repeat_id "LTR35B,chr13,43838593,43839177";repeat_class "LTR";repeat_family "ERV1";	chr13	43838653	43839088	exon	assembly	-	gene_id "ENSG00000151773.12"; ID "542327"; transcript_id "transcript17424.chr13.nnic"; exon "5"; exon_id "chr13.4844"; pos "last"	19.4655	0	0	0
chr13	46711709	46711858	-	repeat_id "X9_LINE,chr13,46711709,46711858";repeat_class "LINE";repeat_family "L1";	chr13	46711791	46711844	exon	assembly	+	gene_id "ENSG00000136141.14"; ID "543196"; transcript_id "ENST00000311191.10"; exon "14"; exon_id "chr13.5587"; pos "mid"	6.65925	73.7394	0	0
chr13	46790225	46791023	-	repeat_id "HAL1,chr13,46790225,46791023";repeat_class "LINE";repeat_family "L1";	chr13	46790597	46790661	exon	assembly	-	gene_id "ENSG00000139684.13"; ID "543344"; transcript_id "ENST00000378697.5"; exon "4"; exon_id "chr13.5646"; pos "mid"	0	0	22.1022	0
chr13	47217543	47217844	-	repeat_id "AluSp,chr13,47217543,47217844";repeat_class "SINE";repeat_family "Alu";	chr13	47217566	47217686	exon	assembly	+	gene_id "novel_gene_chr13_21211"; ID "543408"; transcript_id "transcript21220.chr13.nnic"; exon "1"; exon_id "chr13.5695"; pos "first"	0	60.5172	0	0
chr13	47248794	47249118	-	repeat_id "MLT1H2,chr13,47248794,47249118";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	47248791	47248866	exon	assembly	+	gene_id "novel_gene_chr13_21211"; ID "543409"; transcript_id "transcript21220.chr13.nnic"; exon "2"; exon_id "chr13.5699"; pos "mid"	0	0	0	0
chr13	49255791	49255918	+	repeat_id "X8_LINE,chr13,49255791,49255918";repeat_class "LINE";repeat_family "CR1";	chr13	49255839	49255913	exon	assembly	+	gene_id "ENSG00000102543.14"; ID "543964"; transcript_id "transcript23200.chr13.nic"; exon "3"; exon_id "chr13.6023"; pos "mid"	33.2962	0	0	0
chr13	49255791	49255918	+	repeat_id "X8_LINE,chr13,49255791,49255918";repeat_class "LINE";repeat_family "CR1";	chr13	49255839	49255913	exon	assembly	+	gene_id "ENSG00000102543.14"; ID "543981"; transcript_id "ENST00000251108.10"; exon "3"; exon_id "chr13.6023"; pos "mid"	33.2962	0	0	0
chr13	49255791	49255918	+	repeat_id "X8_LINE,chr13,49255791,49255918";repeat_class "LINE";repeat_family "CR1";	chr13	49255839	49255913	exon	assembly	+	gene_id "ENSG00000102543.14"; ID "543992"; transcript_id "ENST00000466868.1"; exon "3"; exon_id "chr13.6023"; pos "mid"	33.2962	0	0	0
chr13	49433175	49433402	-	repeat_id "L3b,chr13,49433175,49433402";repeat_class "LINE";repeat_family "CR1";	chr13	49433318	49433393	exon	assembly	-	gene_id "ENSG00000102547.18"; ID "544028"; transcript_id "ENST00000409308.5"; exon "3"; exon_id "chr13.6077"; pos "mid"	14.3429	0	0	70.0035
chr13	49580303	49580603	+	repeat_id "AluJb,chr13,49580303,49580603";repeat_class "SINE";repeat_family "Alu";	chr13	49580505	49580584	exon	assembly	-	gene_id "ENSG00000136144.11"; ID "544165"; transcript_id "ENST00000378302.6"; exon "2"; exon_id "chr13.6197"; pos "mid"	43.5408	75.265	37.5737	71.9752
chr13	49580303	49580603	+	repeat_id "AluJb,chr13,49580303,49580603";repeat_class "SINE";repeat_family "Alu";	chr13	49580505	49580584	exon	assembly	-	gene_id "ENSG00000136144.11"; ID "544192"; transcript_id "transcript23960.chr13.nnic"; exon "2"; exon_id "chr13.6197"; pos "mid"	43.5408	75.265	37.5737	71.9752
chr13	49580303	49580603	+	repeat_id "AluJb,chr13,49580303,49580603";repeat_class "SINE";repeat_family "Alu";	chr13	49580505	49580584	exon	assembly	-	gene_id "ENSG00000136144.11"; ID "544218"; transcript_id "transcript23979.chr13.nnic"; exon "2"; exon_id "chr13.6197"; pos "mid"	43.5408	75.265	37.5737	71.9752
chr13	50001008	50001309	+	repeat_id "AluSq2,chr13,50001008,50001309";repeat_class "SINE";repeat_family "Alu";	chr13	50000995	50001108	exon	assembly	+	gene_id "ENSG00000204977.9"; ID "544471"; transcript_id "ENST00000356017.8"; exon "3"; exon_id "chr13.6338"; pos "mid"	0	0	0	0
chr13	50083021	50083238	-	repeat_id "MIRb,chr13,50083021,50083238";repeat_class "SINE";repeat_family "MIR";	chr13	50083142	50083194	exon	assembly	+	gene_id "ENSG00000176124.11"; ID "544530"; transcript_id "ENST00000469754.2"; exon "2"; exon_id "chr13.6359"; pos "mid"	37.9061	0	0	0
chr13	52661307	52661592	-	repeat_id "AluSz,chr13,52661307,52661592";repeat_class "SINE";repeat_family "Alu";	chr13	52661475	52661570	exon	assembly	+	gene_id "ENSG00000165416.14"; ID "545475"; transcript_id "transcript28504.chr13.nic"; exon "6"; exon_id "chr13.7201"; pos "mid"	0	11.1881	0	10.8456
chr13	52661307	52661592	-	repeat_id "AluSz,chr13,52661307,52661592";repeat_class "SINE";repeat_family "Alu";	chr13	52661475	52661570	exon	assembly	+	gene_id "ENSG00000165416.14"; ID "545504"; transcript_id "ENST00000343788.10"; exon "6"; exon_id "chr13.7201"; pos "mid"	0	11.1881	0	10.8456
chr13	59982534	59983704	-	repeat_id "Charlie1,chr13,59982534,59983704";repeat_class "DNA";repeat_family "hAT-Charlie";	chr13	59982472	59983887	exon	assembly	-	gene_id "ENSG00000139734.17"; ID "545571"; transcript_id "transcript28876.chr13.nic"; exon "4"; exon_id "chr13.7349"; pos "last"	0	0	0	0
chr13	73764771	73765179	+	repeat_id "MamRep605b,chr13,73764771,73765179";repeat_class "LTR?";repeat_family "LTR?";	chr13	73764938	73765000	exon	assembly	-	gene_id "ENSG00000118922.17"; ID "546326"; transcript_id "ENST00000377669.6"; exon "5"; exon_id "chr13.7865"; pos "mid"	36.3694	0	0	0
chr13	75527643	75528001	+	repeat_id "L1MA9,chr13,75527643,75528001";repeat_class "LINE";repeat_family "L1";	chr13	75527813	75527851	exon	assembly	-	gene_id "ENSG00000188243.12"; ID "546664"; transcript_id "ENST00000355801.4"; exon "4"; exon_id "chr13.8045"; pos "mid"	0	0	0	0
chr13	75538434	75538830	-	repeat_id "L1MC4,chr13,75538434,75538830";repeat_class "LINE";repeat_family "L1";	chr13	75538753	75538802	exon	assembly	-	gene_id "ENSG00000188243.12"; ID "546650"; transcript_id "ENST00000377615.7"; exon "1"; exon_id "chr13.8039"; pos "first"	0	0	0	0
chr13	108214508	108214674	+	repeat_id "MIRb,chr13,108214508,108214674";repeat_class "SINE";repeat_family "MIR";	chr13	108214538	108214610	exon	assembly	-	gene_id "ENSG00000174405.13"; ID "550842"; transcript_id "ENST00000442234.5"; exon "2"; exon_id "chr13.10964"; pos "mid"	71.2024	0	0	0
chr13	109265522	109269447	+	repeat_id "HERVH-int,chr13,109265522,109269447";repeat_class "LTR";repeat_family "ERV1";	chr13	109267734	109267840	exon	assembly	-	gene_id "novel_gene_chr13_38657"; ID "550946"; transcript_id "transcript38656.chr13.nnic"; exon "2"; exon_id "chr13.11064"; pos "mid"	535.809	281.226	569.133	349.031
chr13	109265522	109269447	+	repeat_id "HERVH-int,chr13,109265522,109269447";repeat_class "LTR";repeat_family "ERV1";	chr13	109268786	109269564	exon	assembly	-	gene_id "novel_gene_chr13_38657"; ID "550945"; transcript_id "transcript38656.chr13.nnic"; exon "1"; exon_id "chr13.11073"; pos "first"	535.809	281.226	569.133	349.031
chr13	111337199	111337649	-	repeat_id "MLT1F,chr13,111337199,111337649";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	111337397	111337671	exon	assembly	+	gene_id "ENSG00000153495.10"; ID "551955"; transcript_id "transcript40414.chr13.nnic"; exon "1"; exon_id "chr13.11654"; pos "first"	0	0	0	0
chr13	111337199	111337649	-	repeat_id "MLT1F,chr13,111337199,111337649";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	111337397	111337671	exon	assembly	+	gene_id "ENSG00000153495.10"; ID "551961"; transcript_id "transcript40415.chr13.nnic"; exon "1"; exon_id "chr13.11654"; pos "first"	0	0	0	0
chr13	111337199	111337649	-	repeat_id "MLT1F,chr13,111337199,111337649";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr13	111337397	111337671	exon	assembly	+	gene_id "ENSG00000153495.10"; ID "551967"; transcript_id "transcript40423.chr13.nnic"; exon "1"; exon_id "chr13.11654"; pos "first"	0	0	0	0
chr14	23096609	23096883	-	repeat_id "AluJb,chr14,23096609,23096883";repeat_class "SINE";repeat_family "Alu";	chr14	23096622	23096719	exon	assembly	+	gene_id "ENSG00000179933.5"; ID "555310"; transcript_id "transcript8997.chr14.nnic"; exon "2"; exon_id "chr14.2426"; pos "mid"	39.9552	20.8505	7.73577	0
chr14	28599507	28601056	-	repeat_id "L1MC3,chr14,28599507,28601056";repeat_class "LINE";repeat_family "L1";	chr14	28599717	28599837	exon	assembly	+	gene_id "ENSG00000257662.1"; ID "557290"; transcript_id "transcript14378.chr14.nnic"; exon "2"; exon_id "chr14.4703"; pos "mid"	0	0	0	0
chr14	49603524	49603613	-	repeat_id "AluSx3,chr14,49603524,49603613";repeat_class "SINE";repeat_family "Alu";	chr14	49603552	49603618	exon	assembly	+	gene_id "ENSG00000165501.16"; ID "560554"; transcript_id "transcript24704.chr14.nic"; exon "3"; exon_id "chr14.7382"; pos "mid"	0	0	0	0
chr14	49619366	49619645	+	repeat_id "AluSp,chr14,49619366,49619645";repeat_class "SINE";repeat_family "Alu";	chr14	49619525	49619602	exon	assembly	-	gene_id "ENSG00000165502.6"; ID "560582"; transcript_id "transcript24872.chr14.nnic"; exon "2"; exon_id "chr14.7395"; pos "mid"	7.17143	0	0	0
chr14	49796226	49796328	+	repeat_id "L2c,chr14,49796226,49796328";repeat_class "LINE";repeat_family "L2";	chr14	49796233	49796328	exon	assembly	-	gene_id "ENSG00000165525.17"; ID "560827"; transcript_id "ENST00000556074.5"; exon "4"; exon_id "chr14.7520"; pos "mid"	0	0	0	0
chr14	49862550	49862849	-	repeat_id "7SLRNA,chr14,49862550,49862849";repeat_class "srpRNA";repeat_family "srpRNA";	chr14	49862550	49862849	exon	assembly	-	gene_id "ENSG00000274012.1"; ID "560918"; transcript_id "ENST00000490232.3"; exon "1"; exon_id "chr14.7544";	436.434	755.7	980.236	492.982
chr14	50314466	50314637	-	repeat_id "L1MD2,chr14,50314466,50314637";repeat_class "LINE";repeat_family "L1";	chr14	50314591	50314626	exon	assembly	+	gene_id "ENSG00000125375.14"; ID "561249"; transcript_id "transcript26942.chr14.nnic"; exon "2"; exon_id "chr14.7759"; pos "mid"	16.9043	0	0	0
chr14	51553918	51555014	+	repeat_id "L1MC3,chr14,51553918,51555014";repeat_class "LINE";repeat_family "L1";	chr14	51554660	51554805	exon	assembly	+	gene_id "ENSG00000139926.15"; ID "561959"; transcript_id "ENST00000555952.5"; exon "1"; exon_id "chr14.8349"; pos "first"	0	0	0	0
chr14	55094502	55094607	-	repeat_id "AluJb,chr14,55094502,55094607";repeat_class "SINE";repeat_family "Alu";	chr14	55094503	55094622	exon	assembly	-	gene_id "novel_gene_chr14_34205"; ID "563438"; transcript_id "transcript34204.chr14.nnic"; exon "2"; exon_id "chr14.9314"; pos "mid"	15.8797	0	0	0
chr14	55148574	55148700	+	repeat_id "FLAM_A,chr14,55148574,55148700";repeat_class "SINE";repeat_family "Alu";	chr14	55148594	55148684	exon	assembly	-	gene_id "ENSG00000126787.12"; ID "563544"; transcript_id "ENST00000395425.6"; exon "19"; exon_id "chr14.9370"; pos "mid"	52.2493	19.8334	0	0
chr14	55601740	55602035	-	repeat_id "AluSz6,chr14,55601740,55602035";repeat_class "SINE";repeat_family "Alu";	chr14	55601757	55601880	exon	assembly	+	gene_id "ENSG00000126777.17"; ID "563777"; transcript_id "ENST00000555498.5"; exon "2"; exon_id "chr14.9497"; pos "mid"	134.209	16.7821	38.6789	0
chr14	55601740	55602035	-	repeat_id "AluSz6,chr14,55601740,55602035";repeat_class "SINE";repeat_family "Alu";	chr14	55601757	55601880	exon	assembly	+	gene_id "ENSG00000126777.17"; ID "563868"; transcript_id "ENST00000459737.5"; exon "2"; exon_id "chr14.9497"; pos "mid"	134.209	16.7821	38.6789	0
chr14	55601740	55602035	-	repeat_id "AluSz6,chr14,55601740,55602035";repeat_class "SINE";repeat_family "Alu";	chr14	55601792	55601880	exon	assembly	+	gene_id "ENSG00000126777.17"; ID "563781"; transcript_id "ENST00000395311.5"; exon "1"; exon_id "chr14.9500"; pos "first"	134.209	16.7821	38.6789	0
chr14	58293785	58294041	-	repeat_id "AluJb,chr14,58293785,58294041";repeat_class "SINE";repeat_family "Alu";	chr14	58293766	58293926	exon	assembly	-	gene_id "ENSG00000257621.7"; ID "564508"; transcript_id "transcript37046.chr14.nnic"; exon "2"; exon_id "chr14.10059"; pos "mid"	20.49	0	38.6789	0
chr14	58423953	58424081	-	repeat_id "L3,chr14,58423953,58424081";repeat_class "LINE";repeat_family "CR1";	chr14	58424008	58424095	exon	assembly	-	gene_id "ENSG00000100575.13"; ID "564631"; transcript_id "ENST00000395159.6"; exon "3"; exon_id "chr14.10173"; pos "mid"	13.8308	65.0941	0	0
chr14	61078802	61079084	-	repeat_id "AluJb,chr14,61078802,61079084";repeat_class "SINE";repeat_family "Alu";	chr14	61078830	61078927	exon	assembly	+	gene_id "ENSG00000139974.15"; ID "565294"; transcript_id "transcript39440.chr14.nic"; exon "16"; exon_id "chr14.10822"; pos "mid"	0	0	0	0
chr14	61083387	61083775	+	repeat_id "MLT1B,chr14,61083387,61083775";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr14	61083550	61083729	exon	assembly	+	gene_id "ENSG00000139974.15"; ID "565295"; transcript_id "transcript39440.chr14.nic"; exon "17"; exon_id "chr14.10823"; pos "last"	0	0	0	0
chr14	63624584	63625429	+	repeat_id "L1ME1,chr14,63624584,63625429";repeat_class "LINE";repeat_family "L1";	chr14	63624928	63625033	exon	assembly	-	gene_id "ENSG00000140006.11"; ID "565848"; transcript_id "ENST00000267522.7"; exon "2"; exon_id "chr14.11225"; pos "mid"	77.8612	47.2947	0	0
chr14	65059320	65059649	-	repeat_id "L1ME3Cz,chr14,65059320,65059649";repeat_class "LINE";repeat_family "L1";	chr14	65059394	65059442	exon	assembly	+	gene_id "ENSG00000257365.7"; ID "566531"; transcript_id "transcript43319.chr14.nnic"; exon "12"; exon_id "chr14.11922"; pos "mid"	0	0	0	0
chr14	69203800	69204074	-	repeat_id "MIR,chr14,69203800,69204074";repeat_class "SINE";repeat_family "MIR";	chr14	69203917	69204000	exon	assembly	+	gene_id "ENSG00000081177.18"; ID "567978"; transcript_id "transcript47912.chr14.nic"; exon "2"; exon_id "chr14.13084"; pos "mid"	76.3247	0	0	51.2699
chr14	72879826	72879974	+	repeat_id "Charlie4z,chr14,72879826,72879974";repeat_class "DNA";repeat_family "hAT-Charlie";	chr14	72879804	72879947	exon	assembly	-	gene_id "ENSG00000205683.11"; ID "569119"; transcript_id "ENST00000614862.4"; exon "2"; exon_id "chr14.13949"; pos "mid"	0	0	0	0
chr14	73366876	73367023	+	repeat_id "MIRb,chr14,73366876,73367023";repeat_class "SINE";repeat_family "MIR";	chr14	73366897	73366981	exon	assembly	-	gene_id "ENSG00000133961.19"; ID "569696"; transcript_id "ENST00000555394.5"; exon "3"; exon_id "chr14.14285"; pos "mid"	87.5943	94.5897	0	27.6069
chr14	73366876	73367023	+	repeat_id "MIRb,chr14,73366876,73367023";repeat_class "SINE";repeat_family "MIR";	chr14	73366897	73366981	exon	assembly	-	gene_id "ENSG00000133961.19"; ID "569721"; transcript_id "ENST00000555238.5"; exon "3"; exon_id "chr14.14285"; pos "mid"	87.5943	94.5897	0	27.6069
chr14	73652945	73653363	-	repeat_id "MER101,chr14,73652945,73653363";repeat_class "LTR";repeat_family "ERV1";	chr14	73653150	73653215	exon	assembly	+	gene_id "ENSG00000119661.14"; ID "569982"; transcript_id "transcript52949.chr14.nic"; exon "1"; exon_id "chr14.14498"; pos "first"	0	34.5811	0	0
chr14	73887909	73888375	-	repeat_id "L2,chr14,73887909,73888375";repeat_class "LINE";repeat_family "L2";	chr14	73888273	73888364	exon	assembly	+	gene_id "ENSG00000119725.18"; ID "570194"; transcript_id "transcript53222.chr14.nnic"; exon "2"; exon_id "chr14.14609"; pos "mid"	17.4163	0	39.784	50.2841
chr14	74113957	74114144	-	repeat_id "AluSx3,chr14,74113957,74114144";repeat_class "SINE";repeat_family "Alu";	chr14	74114006	74114123	exon	assembly	+	gene_id "ENSG00000205659.10"; ID "570581"; transcript_id "transcript54470.chr14.nnic"; exon "6"; exon_id "chr14.14898"; pos "mid"	0	0	0	0
chr14	81209878	81209932	+	repeat_id "L2c,chr14,81209878,81209932";repeat_class "LINE";repeat_family "L2";	chr14	81209870	81209936	exon	assembly	-	gene_id "ENSG00000165417.11"; ID "573007"; transcript_id "ENST00000298173.7"; exon "3"; exon_id "chr14.16987"; pos "mid"	0	0	0	0
chr14	81426947	81427193	-	repeat_id "MIR,chr14,81426947,81427193";repeat_class "SINE";repeat_family "MIR";	chr14	81427102	81427212	exon	assembly	-	gene_id "ENSG00000140022.9"; ID "573084"; transcript_id "transcript61502.chr14.nnic"; exon "2"; exon_id "chr14.17009"; pos "mid"	0	0	0	0
chr14	88427628	88427721	-	repeat_id "L2d,chr14,88427628,88427721";repeat_class "LINE";repeat_family "L2";	chr14	88427630	88427696	exon	assembly	+	gene_id "ENSG00000042317.16"; ID "573508"; transcript_id "ENST00000393545.8"; exon "7"; exon_id "chr14.17401"; pos "mid"	0	8.64535	0	0
chr14	88427628	88427721	-	repeat_id "L2d,chr14,88427628,88427721";repeat_class "LINE";repeat_family "L2";	chr14	88427630	88427696	exon	assembly	+	gene_id "ENSG00000042317.16"; ID "573534"; transcript_id "ENST00000556553.5"; exon "7"; exon_id "chr14.17401"; pos "mid"	0	8.64535	0	0
chr14	89956616	89956909	+	repeat_id "AluSz,chr14,89956616,89956909";repeat_class "SINE";repeat_family "Alu";	chr14	89956578	89956800	exon	assembly	+	gene_id "ENSG00000042088.13"; ID "574215"; transcript_id "ENST00000335725.8"; exon "2"; exon_id "chr14.17890"; pos "mid"	39.9551	33.564	72.9376	130.147
chr14	90258078	90258330	+	repeat_id "MIRb,chr14,90258078,90258330";repeat_class "SINE";repeat_family "MIR";	chr14	90258081	90258161	exon	assembly	+	gene_id "ENSG00000100764.13"; ID "574277"; transcript_id "transcript63522.chr14.nnic"; exon "2"; exon_id "chr14.17938"; pos "mid"	0	0	0	0
chr14	92080546	92080835	-	repeat_id "AluSx,chr14,92080546,92080835";repeat_class "SINE";repeat_family "Alu";	chr14	92080541	92080567	exon	assembly	-	gene_id "ENSG00000066427.21"; ID "575106"; transcript_id "ENST00000545170.5"; exon "10"; exon_id "chr14.18606"; pos "mid"	0	0	0	0
chr14	92118691	92118997	+	repeat_id "AluSg,chr14,92118691,92118997";repeat_class "SINE";repeat_family "Alu";	chr14	92118849	92118966	exon	assembly	-	gene_id "ENSG00000183648.9"; ID "575200"; transcript_id "ENST00000553514.5"; exon "2"; exon_id "chr14.18624"; pos "mid"	8.70825	0	0	18.7332
chr14	102508440	102508573	+	repeat_id "MIR3,chr14,102508440,102508573";repeat_class "SINE";repeat_family "MIR";	chr14	102508475	102508549	exon	assembly	-	gene_id "ENSG00000156381.8"; ID "578640"; transcript_id "ENST00000286918.8"; exon "3"; exon_id "chr14.21902"; pos "mid"	0	0	0	11.8316
chr14	103684866	103685076	-	repeat_id "MIRc,chr14,103684866,103685076";repeat_class "SINE";repeat_family "MIR";	chr14	103684986	103685036	exon	assembly	+	gene_id "ENSG00000126214.21"; ID "579658"; transcript_id "ENST00000389744.8"; exon "14"; exon_id "chr14.22552"; pos "mid"	211.558	19.8334	47.5197	65.0737
chr14	103712861	103713310	+	repeat_id "MER31A,chr14,103712861,103713310";repeat_class "LTR";repeat_family "ERV1";	chr14	103712875	103712931	exon	assembly	-	gene_id "ENSG00000126215.13"; ID "579831"; transcript_id "ENST00000555055.5"; exon "2"; exon_id "chr14.22635"; pos "mid"	57.8839	71.7052	36.4686	0
chr15	23309107	23309417	-	repeat_id "AluY,chr15,23309107,23309417";repeat_class "SINE";repeat_family "Alu";	chr15	23309140	23309457	exon	assembly	+	gene_id "ENSG00000274471.1"; ID "581509"; transcript_id "transcript1542.chr15.nnic"; exon "3"; exon_id "chr15.884"; pos "mid"	0	0	0	0
chr15	34391146	34391457	+	repeat_id "AluSx1,chr15,34391146,34391457";repeat_class "SINE";repeat_family "Alu";	chr15	34391123	34391265	exon	assembly	-	gene_id "ENSG00000175265.17"; ID "583353"; transcript_id "ENST00000473125.5"; exon "8"; exon_id "chr15.3836"; pos "mid"	0	0	0	0
chr15	34391146	34391457	+	repeat_id "AluSx1,chr15,34391146,34391457";repeat_class "SINE";repeat_family "Alu";	chr15	34391353	34391426	exon	assembly	-	gene_id "ENSG00000175265.17"; ID "583352"; transcript_id "ENST00000473125.5"; exon "7"; exon_id "chr15.3835"; pos "mid"	0	0	0	0
chr15	34537367	34537678	+	repeat_id "AluSx1,chr15,34537367,34537678";repeat_class "SINE";repeat_family "Alu";	chr15	34537344	34537647	exon	assembly	-	gene_id "ENSG00000215252.11"; ID "583432"; transcript_id "ENST00000569100.5"; exon "8"; exon_id "chr15.3868"; pos "mid"	0	0	0	0
chr15	34537367	34537678	+	repeat_id "AluSx1,chr15,34537367,34537678";repeat_class "SINE";repeat_family "Alu";	chr15	34537344	34537647	exon	assembly	-	gene_id "ENSG00000215252.11"; ID "583514"; transcript_id "ENST00000484716.5"; exon "8"; exon_id "chr15.3868"; pos "mid"	0	0	0	0
chr15	34588273	34588649	-	repeat_id "THE1D,chr15,34588273,34588649";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	34588391	34588503	exon	assembly	-	gene_id "ENSG00000215252.11"; ID "583425"; transcript_id "ENST00000569100.5"; exon "1"; exon_id "chr15.3872"; pos "first"	18.9533	0	0	0
chr15	34985618	34985912	+	repeat_id "AluSx,chr15,34985618,34985912";repeat_class "SINE";repeat_family "Alu";	chr15	34985769	34985869	exon	assembly	-	gene_id "ENSG00000198146.4"; ID "583649"; transcript_id "transcript6143.chr15.nnic"; exon "3"; exon_id "chr15.4034"; pos "mid"	0	0	0	0
chr15	40610751	40611046	-	repeat_id "AluSq2,chr15,40610751,40611046";repeat_class "SINE";repeat_family "Alu";	chr15	40610799	40610876	exon	assembly	+	gene_id "ENSG00000137812.19"; ID "585054"; transcript_id "ENST00000346991.9"; exon "7"; exon_id "chr15.5270"; pos "mid"	0	0	0	0
chr15	40657016	40657149	+	repeat_id "L2,chr15,40657016,40657149";repeat_class "LINE";repeat_family "L2";	chr15	40657042	40657151	exon	assembly	+	gene_id "ENSG00000137812.19"; ID "585071"; transcript_id "ENST00000346991.9"; exon "24"; exon_id "chr15.5284"; pos "mid"	78.3739	41.1922	24.3125	113.386
chr15	40657016	40657149	+	repeat_id "L2,chr15,40657016,40657149";repeat_class "LINE";repeat_family "L2";	chr15	40657042	40657151	exon	assembly	+	gene_id "ENSG00000137812.19"; ID "585104"; transcript_id "ENST00000399668.6"; exon "23"; exon_id "chr15.5284"; pos "mid"	78.3739	41.1922	24.3125	113.386
chr15	40835983	40836492	-	repeat_id "MLT1F2,chr15,40835983,40836492";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	40835993	40836282	exon	assembly	-	gene_id "ENSG00000261183.5"; ID "585441"; transcript_id "transcript11337.chr15.nnic"; exon "3"; exon_id "chr15.5476"; pos "last"	0	0	0	0
chr15	40835983	40836492	-	repeat_id "MLT1F2,chr15,40835983,40836492";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	40835993	40836282	exon	assembly	-	gene_id "ENSG00000261183.5"; ID "585449"; transcript_id "ENST00000564302.5"; exon "3"; exon_id "chr15.5476"; pos "last"	0	0	0	0
chr15	40838377	40838824	-	repeat_id "MLT1G1,chr15,40838377,40838824";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	40838339	40838686	exon	assembly	-	gene_id "ENSG00000261183.5"; ID "585452"; transcript_id "ENST00000568525.1"; exon "2"; exon_id "chr15.5483"; pos "last"	18.441	0	0	0
chr15	40838377	40838824	-	repeat_id "MLT1G1,chr15,40838377,40838824";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	40838543	40838686	exon	assembly	-	gene_id "ENSG00000261183.5"; ID "585448"; transcript_id "ENST00000564302.5"; exon "2"; exon_id "chr15.5481"; pos "mid"	18.441	0	0	0
chr15	41308526	41308704	+	repeat_id "L2c,chr15,41308526,41308704";repeat_class "LINE";repeat_family "L2";	chr15	41308567	41308624	exon	assembly	+	gene_id "ENSG00000247556.6"; ID "585838"; transcript_id "ENST00000501665.2"; exon "4"; exon_id "chr15.5795"; pos "mid"	29.7102	28.4787	0	0
chr15	41440181	41440488	-	repeat_id "AluSx,chr15,41440181,41440488";repeat_class "SINE";repeat_family "Alu";	chr15	41440236	41440333	exon	assembly	+	gene_id "ENSG00000137815.14"; ID "585973"; transcript_id "ENST00000462276.1"; exon "3"; exon_id "chr15.5921"; pos "mid"	0	0	0	0
chr15	41477432	41477516	+	repeat_id "HERVIP10F-int,chr15,41477432,41477516";repeat_class "LTR";repeat_family "ERV1";	chr15	41477458	41477515	exon	assembly	+	gene_id "ENSG00000137815.14"; ID "585965"; transcript_id "ENST00000389629.8"; exon "14"; exon_id "chr15.5915"; pos "mid"	0	42.7178	38.6789	0
chr15	41946925	41947161	-	repeat_id "MIR,chr15,41946925,41947161";repeat_class "SINE";repeat_family "MIR";	chr15	41946947	41947155	exon	assembly	-	gene_id "ENSG00000103966.10"; ID "586432"; transcript_id "transcript14100.chr15.nnic"; exon "1"; exon_id "chr15.6404"; pos "first"	0	0	0	0
chr15	42510132	42510435	-	repeat_id "AluJb,chr15,42510132,42510435";repeat_class "SINE";repeat_family "Alu";	chr15	42510161	42510278	exon	assembly	+	gene_id "ENSG00000092531.9"; ID "586811"; transcript_id "transcript14936.chr15.nnic"; exon "2"; exon_id "chr15.6775"; pos "mid"	0	0	0	0
chr15	42560621	42560887	-	repeat_id "AluJr4,chr15,42560621,42560887";repeat_class "SINE";repeat_family "Alu";	chr15	42560782	42560870	exon	assembly	+	gene_id "ENSG00000137814.10"; ID "586979"; transcript_id "ENST00000391623.8"; exon "3"; exon_id "chr15.6830"; pos "mid"	0	0	0	27.6069
chr15	43160693	43160803	+	repeat_id "OldhAT1,chr15,43160693,43160803";repeat_class "DNA";repeat_family "hAT-Ac";	chr15	43160681	43160794	exon	assembly	+	gene_id "ENSG00000137842.6"; ID "587548"; transcript_id "ENST00000260403.6"; exon "10"; exon_id "chr15.7295"; pos "mid"	0	0	0	0
chr15	43333140	43333433	+	repeat_id "AluJb,chr15,43333140,43333433";repeat_class "SINE";repeat_family "Alu";	chr15	43333311	43333434	exon	assembly	+	gene_id "ENSG00000168803.14"; ID "587692"; transcript_id "ENST00000428046.7"; exon "3"; exon_id "chr15.7421"; pos "mid"	17.4165	0	0	0
chr15	49161709	49162018	-	repeat_id "AluSx1,chr15,49161709,49162018";repeat_class "SINE";repeat_family "Alu";	chr15	49161740	49161861	exon	assembly	+	gene_id "ENSG00000156958.14"; ID "589882"; transcript_id "transcript23017.chr15.nic"; exon "2"; exon_id "chr15.9753"; pos "mid"	0	6.61115	0	0
chr15	49195053	49195370	-	repeat_id "AluSx3,chr15,49195053,49195370";repeat_class "SINE";repeat_family "Alu";	chr15	49195085	49195214	exon	assembly	+	gene_id "ENSG00000156958.14"; ID "589937"; transcript_id "ENST00000544523.5"; exon "2"; exon_id "chr15.9773"; pos "mid"	0	0	0	0
chr15	55187989	55188511	+	repeat_id "hAT-1_Mam,chr15,55187989,55188511";repeat_class "DNA";repeat_family "hAT-Tag1";	chr15	55188488	55188505	exon	assembly	-	gene_id "ENSG00000137876.9"; ID "591506"; transcript_id "transcript28398.chr15.nnic"; exon "1"; exon_id "chr15.11308"; pos "first"	0	0	0	0
chr15	55314019	55314182	+	repeat_id "AluSx1,chr15,55314019,55314182";repeat_class "SINE";repeat_family "Alu";	chr15	55314087	55314160	exon	assembly	-	gene_id "ENSG00000069974.15"; ID "591528"; transcript_id "transcript28856.chr15.nnic"; exon "2"; exon_id "chr15.11332"; pos "mid"	0	0	0	0
chr15	64073614	64073900	-	repeat_id "AluJr4,chr15,64073614,64073900";repeat_class "SINE";repeat_family "Alu";	chr15	64073788	64073817	exon	assembly	-	gene_id "ENSG00000166797.10"; ID "594891"; transcript_id "ENST00000558779.1"; exon "1"; exon_id "chr15.13965"; pos "first"	0	0	0	0
chr15	65304677	65304793	+	repeat_id "U5,chr15,65304677,65304793";repeat_class "snRNA";repeat_family "snRNA";	chr15	65304677	65304792	exon	assembly	+	gene_id "ENSG00000200156.1"; ID "595663"; transcript_id "ENST00000363286.1"; exon "1"; exon_id "chr15.14593";	135473	247167	195263	221494
chr15	65535699	65535989	-	repeat_id "AluJr,chr15,65535699,65535989";repeat_class "SINE";repeat_family "Alu";	chr15	65535721	65535834	exon	assembly	+	gene_id "ENSG00000074696.12"; ID "595806"; transcript_id "ENST00000565299.5"; exon "2"; exon_id "chr15.14721"; pos "mid"	4.61025	0	0	0
chr15	67519001	67519125	+	repeat_id "FLAM_A,chr15,67519001,67519125";repeat_class "SINE";repeat_family "Alu";	chr15	67519000	67519102	exon	assembly	-	gene_id "ENSG00000259673.5"; ID "596821"; transcript_id "transcript47950.chr15.nnic"; exon "2"; exon_id "chr15.15506"; pos "mid"	59.4206	0	0	0
chr15	67519001	67519125	+	repeat_id "FLAM_A,chr15,67519001,67519125";repeat_class "SINE";repeat_family "Alu";	chr15	67519000	67519102	exon	assembly	-	gene_id "ENSG00000259673.5"; ID "596829"; transcript_id "transcript47954.chr15.nnic"; exon "2"; exon_id "chr15.15506"; pos "mid"	59.4206	0	0	0
chr15	69196246	69197521	+	repeat_id "HSMAR1,chr15,69196246,69197521";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr15	69196415	69197458	exon	assembly	+	gene_id "ENSG00000138604.9"; ID "597360"; transcript_id "ENST00000559798.2"; exon "3"; exon_id "chr15.16006"; pos "last"	0	0	0	65.0737
chr15	73912194	73912323	+	repeat_id "FLAM_A,chr15,73912194,73912323";repeat_class "SINE";repeat_family "Alu";	chr15	73912185	73912303	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599367"; transcript_id "transcript55588.chr15.nnic"; exon "3"; exon_id "chr15.17600"; pos "mid"	0	0	0	0
chr15	73912194	73912323	+	repeat_id "FLAM_A,chr15,73912194,73912323";repeat_class "SINE";repeat_family "Alu";	chr15	73912185	73912303	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599372"; transcript_id "transcript55599.chr15.nic"; exon "3"; exon_id "chr15.17600"; pos "mid"	0	0	0	0
chr15	73912194	73912323	+	repeat_id "FLAM_A,chr15,73912194,73912323";repeat_class "SINE";repeat_family "Alu";	chr15	73912185	73912303	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599377"; transcript_id "transcript55600.chr15.nnic"; exon "3"; exon_id "chr15.17600"; pos "mid"	0	0	0	0
chr15	73916093	73916683	-	repeat_id "MLT1F2,chr15,73916093,73916683";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	73916138	73916447	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599392"; transcript_id "transcript55666.chr15.nic"; exon "3"; exon_id "chr15.17609"; pos "last"	0	0	0	0
chr15	73916093	73916683	-	repeat_id "MLT1F2,chr15,73916093,73916683";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	73916138	73916447	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599396"; transcript_id "transcript55668.chr15.nic"; exon "3"; exon_id "chr15.17609"; pos "last"	0	0	0	0
chr15	73916093	73916683	-	repeat_id "MLT1F2,chr15,73916093,73916683";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	73916138	73916447	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599400"; transcript_id "transcript55669.chr15.nic"; exon "3"; exon_id "chr15.17609"; pos "last"	0	0	0	0
chr15	73916093	73916683	-	repeat_id "MLT1F2,chr15,73916093,73916683";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	73916138	73916447	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599404"; transcript_id "transcript55670.chr15.nnic"; exon "3"; exon_id "chr15.17609"; pos "last"	0	0	0	0
chr15	73916093	73916683	-	repeat_id "MLT1F2,chr15,73916093,73916683";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	73916138	73916447	exon	assembly	-	gene_id "ENSG00000261801.5"; ID "599412"; transcript_id "transcript55675.chr15.nnic"; exon "3"; exon_id "chr15.17609"; pos "last"	0	0	0	0
chr15	74458985	74459159	+	repeat_id "MIRc,chr15,74458985,74459159";repeat_class "SINE";repeat_family "MIR";	chr15	74459019	74459103	exon	assembly	-	gene_id "ENSG00000138629.15"; ID "599780"; transcript_id "ENST00000565335.5"; exon "2"; exon_id "chr15.18021"; pos "mid"	0	0	0	0
chr15	74465981	74466287	-	repeat_id "AluSz,chr15,74465981,74466287";repeat_class "SINE";repeat_family "Alu";	chr15	74466036	74466130	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599862"; transcript_id "transcript56356.chr15.nic"; exon "2"; exon_id "chr15.18043"; pos "mid"	0	0	0	0
chr15	74465981	74466287	-	repeat_id "AluSz,chr15,74465981,74466287";repeat_class "SINE";repeat_family "Alu";	chr15	74466036	74466130	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599872"; transcript_id "transcript56370.chr15.nic"; exon "2"; exon_id "chr15.18043"; pos "mid"	0	0	0	0
chr15	74465981	74466287	-	repeat_id "AluSz,chr15,74465981,74466287";repeat_class "SINE";repeat_family "Alu";	chr15	74466036	74466130	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599882"; transcript_id "ENST00000499217.6"; exon "2"; exon_id "chr15.18043"; pos "mid"	0	0	0	0
chr15	74479084	74480909	-	repeat_id "LTR12C,chr15,74479084,74480909";repeat_class "LTR";repeat_family "ERV1";	chr15	74479060	74479278	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599863"; transcript_id "transcript56356.chr15.nic"; exon "3"; exon_id "chr15.18044"; pos "mid"	3.0735	0	0	0
chr15	74479084	74480909	-	repeat_id "LTR12C,chr15,74479084,74480909";repeat_class "LTR";repeat_family "ERV1";	chr15	74479060	74479278	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599873"; transcript_id "transcript56370.chr15.nic"; exon "3"; exon_id "chr15.18044"; pos "mid"	3.0735	0	0	0
chr15	74479084	74480909	-	repeat_id "LTR12C,chr15,74479084,74480909";repeat_class "LTR";repeat_family "ERV1";	chr15	74479060	74479278	exon	assembly	+	gene_id "ENSG00000247240.7"; ID "599883"; transcript_id "ENST00000499217.6"; exon "3"; exon_id "chr15.18044"; pos "mid"	3.0735	0	0	0
chr15	76227682	76228113	+	repeat_id "Helitron3Na_Mam,chr15,76227682,76228113";repeat_class "RC";repeat_family "Helitron";	chr15	76227713	76227897	exon	assembly	-	gene_id "ENSG00000140374.15"; ID "601290"; transcript_id "ENST00000565910.5"; exon "2"; exon_id "chr15.19436"; pos "mid"	0	0	0	0
chr15	77361243	77361467	+	repeat_id "AluJr,chr15,77361243,77361467";repeat_class "SINE";repeat_family "Alu";	chr15	77361315	77361431	exon	assembly	-	gene_id "ENSG00000173517.10"; ID "601612"; transcript_id "transcript61470.chr15.nnic"; exon "3"; exon_id "chr15.19712"; pos "mid"	0	0	0	37.4665
chr15	78786806	78787230	+	repeat_id "Tigger2a,chr15,78786806,78787230";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr15	78787024	78787258	exon	assembly	-	gene_id "ENSG00000136378.14"; ID "602335"; transcript_id "transcript63796.chr15.nnic"; exon "9"; exon_id "chr15.20466"; pos "last"	0	0	0	0
chr15	79314361	79314712	-	repeat_id "MLT1J1,chr15,79314361,79314712";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	79314541	79314655	exon	assembly	+	gene_id "ENSG00000166557.12"; ID "602559"; transcript_id "ENST00000543455.1"; exon "3"; exon_id "chr15.20707"; pos "mid"	16.9043	0	0	0
chr15	79907509	79907737	+	repeat_id "AluSx1,chr15,79907509,79907737";repeat_class "SINE";repeat_family "Alu";	chr15	79907629	79907684	exon	assembly	-	gene_id "ENSG00000180953.11"; ID "602645"; transcript_id "ENST00000485386.1"; exon "2"; exon_id "chr15.20759"; pos "mid"	0	9.66245	81.7785	0
chr15	79907509	79907737	+	repeat_id "AluSx1,chr15,79907509,79907737";repeat_class "SINE";repeat_family "Alu";	chr15	79907629	79907706	exon	assembly	-	gene_id "ENSG00000180953.11"; ID "602637"; transcript_id "transcript64767.chr15.nnic"; exon "2"; exon_id "chr15.20756"; pos "mid"	0	9.66245	81.7785	0
chr15	85680813	85681117	-	repeat_id "AluSz,chr15,85680813,85681117";repeat_class "SINE";repeat_family "Alu";	chr15	85680813	85681126	exon	assembly	+	gene_id "ENSG00000170776.21"; ID "604129"; transcript_id "transcript69358.chr15.nnic"; exon "1"; exon_id "chr15.22606"; pos "first"	0	0	0	0
chr15	87576720	87577130	+	repeat_id "MSTC,chr15,87576720,87577130";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr15	87576929	87577047	exon	assembly	+	gene_id "ENSG00000259527.2"; ID "604411"; transcript_id "ENST00000560153.2"; exon "1"; exon_id "chr15.22839"; pos "first"	0	0	38.6789	0
chr15	89245186	89245334	-	repeat_id "AluSc,chr15,89245186,89245334";repeat_class "SINE";repeat_family "Alu";	chr15	89245195	89245311	exon	assembly	+	gene_id "ENSG00000140525.17"; ID "604978"; transcript_id "ENST00000567996.5"; exon "2"; exon_id "chr15.23290"; pos "mid"	0	0	0	0
chr15	89245497	89246141	-	repeat_id "L2b,chr15,89245497,89246141";repeat_class "LINE";repeat_family "L2";	chr15	89245756	89245839	exon	assembly	+	gene_id "ENSG00000140525.17"; ID "604979"; transcript_id "ENST00000567996.5"; exon "3"; exon_id "chr15.23298"; pos "mid"	72.7391	0	38.6789	190.291
chr16	1837999	1838299	-	repeat_id "AluJr,chr16,1837999,1838299";repeat_class "SINE";repeat_family "Alu";	chr16	1838016	1838134	exon	assembly	+	gene_id "ENSG00000180185.11"; ID "610752"; transcript_id "ENST00000382666.5"; exon "2"; exon_id "chr16.2460"; pos "mid"	0	0	0	0
chr16	2940041	2940097	-	repeat_id "Charlie4,chr16,2940041,2940097";repeat_class "DNA";repeat_family "hAT-Charlie";	chr16	2940032	2940092	exon	assembly	+	gene_id "ENSG00000059122.16"; ID "612319"; transcript_id "ENST00000253928.13"; exon "9"; exon_id "chr16.4055"; pos "mid"	149.064	0	5.52555	0
chr16	4496118	4496423	-	repeat_id "AluSz,chr16,4496118,4496423";repeat_class "SINE";repeat_family "Alu";	chr16	4496146	4496266	exon	assembly	+	gene_id "ENSG00000103415.11"; ID "613933"; transcript_id "ENST00000613539.1"; exon "1"; exon_id "chr16.5598"; pos "first"	16.9043	0	0	0
chr16	10428877	10429027	-	repeat_id "FRAM,chr16,10428877,10429027";repeat_class "SINE";repeat_family "Alu";	chr16	10428868	10429016	exon	assembly	+	gene_id "ENSG00000166669.13"; ID "615340"; transcript_id "ENST00000396560.6"; exon "2"; exon_id "chr16.7022"; pos "mid"	0	0	0	0
chr16	11551561	11551847	+	repeat_id "AluJr,chr16,11551561,11551847";repeat_class "SINE";repeat_family "Alu";	chr16	11551707	11551804	exon	assembly	-	gene_id "ENSG00000189067.12"; ID "615891"; transcript_id "ENST00000413364.6"; exon "4"; exon_id "chr16.7491"; pos "mid"	0	7.11963	0	0
chr16	12135306	12135786	+	repeat_id "MLT1K,chr16,12135306,12135786";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr16	12135551	12135737	exon	assembly	+	gene_id "ENSG00000048471.13"; ID "616329"; transcript_id "transcript18410.chr16.nic"; exon "14"; exon_id "chr16.7774"; pos "last"	0	0	0	0
chr16	12771841	12772121	+	repeat_id "AluSx,chr16,12771841,12772121";repeat_class "SINE";repeat_family "Alu";	chr16	12771773	12772119	exon	assembly	-	gene_id "ENSG00000103381.11"; ID "616588"; transcript_id "transcript19334.chr16.nnic"; exon "3"; exon_id "chr16.7944"; pos "last"	0	8.64535	0	0
chr16	15649323	15649622	-	repeat_id "AluSx3,chr16,15649323,15649622";repeat_class "SINE";repeat_family "Alu";	chr16	15649348	15649469	exon	assembly	+	gene_id "ENSG00000072864.14"; ID "617534"; transcript_id "ENST00000396355.5"; exon "2"; exon_id "chr16.8730"; pos "mid"	0	0	0	0
chr16	15651927	15652196	-	repeat_id "AluSx4,chr16,15651927,15652196";repeat_class "SINE";repeat_family "Alu";	chr16	15651953	15652050	exon	assembly	+	gene_id "ENSG00000072864.14"; ID "617523"; transcript_id "transcript21824.chr16.nnic"; exon "2"; exon_id "chr16.8720"; pos "mid"	0	19.3249	15.4716	0
chr16	15882864	15883073	+	repeat_id "AluSx4,chr16,15882864,15883073";repeat_class "SINE";repeat_family "Alu";	chr16	15882949	15883048	exon	assembly	-	gene_id "ENSG00000133393.12"; ID "617645"; transcript_id "ENST00000572415.5"; exon "3"; exon_id "chr16.8945"; pos "mid"	0	0	0	0
chr16	16378885	16379356	-	repeat_id "L1M5,chr16,16378885,16379356";repeat_class "LINE";repeat_family "L1";	chr16	16379055	16379307	exon	assembly	+	gene_id "ENSG00000214967.5"; ID "618016"; transcript_id "ENST00000530217.2"; exon "1"; exon_id "chr16.9219"; pos "first"	0	0	0	0
chr16	18786126	18786367	+	repeat_id "AluSx,chr16,18786126,18786367";repeat_class "SINE";repeat_family "Alu";	chr16	18786240	18786336	exon	assembly	-	gene_id "ENSG00000134419.15"; ID "618322"; transcript_id "ENST00000576008.5"; exon "4"; exon_id "chr16.9683"; pos "mid"	6.65925	0	0	0
chr16	18786126	18786367	+	repeat_id "AluSx,chr16,18786126,18786367";repeat_class "SINE";repeat_family "Alu";	chr16	18786240	18786336	exon	assembly	-	gene_id "ENSG00000134419.15"; ID "618339"; transcript_id "ENST00000576436.5"; exon "3"; exon_id "chr16.9683"; pos "mid"	6.65925	0	0	0
chr16	19525692	19526005	-	repeat_id "L2a,chr16,19525692,19526005";repeat_class "LINE";repeat_family "L2";	chr16	19525719	19525861	exon	assembly	+	gene_id "ENSG00000103540.16"; ID "618795"; transcript_id "ENST00000396212.6"; exon "2"; exon_id "chr16.10066"; pos "mid"	0	0	0	0
chr16	23563774	23564118	+	repeat_id "L2c,chr16,23563774,23564118";repeat_class "LINE";repeat_family "L2";	chr16	23564039	23564109	exon	assembly	+	gene_id "ENSG00000103353.15"; ID "620779"; transcript_id "transcript30428.chr16.nnic"; exon "6"; exon_id "chr16.12148"; pos "mid"	73.2514	18.3078	0	17.7473
chr16	24564687	24564878	+	repeat_id "Tigger15a,chr16,24564687,24564878";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr16	24564797	24564865	exon	assembly	+	gene_id "ENSG00000122257.18"; ID "621015"; transcript_id "ENST00000562430.5"; exon "10"; exon_id "chr16.12500"; pos "mid"	0	0	0	0
chr16	24564687	24564878	+	repeat_id "Tigger15a,chr16,24564687,24564878";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr16	24564797	24564865	exon	assembly	+	gene_id "ENSG00000122257.18"; ID "621043"; transcript_id "ENST00000319715.8"; exon "14"; exon_id "chr16.12500"; pos "mid"	0	0	0	0
chr16	28208877	28209338	+	repeat_id "L1MB3,chr16,28208877,28209338";repeat_class "LINE";repeat_family "L1";	chr16	28208987	28209122	exon	assembly	-	gene_id "ENSG00000169180.11"; ID "622035"; transcript_id "ENST00000565698.5"; exon "2"; exon_id "chr16.13319"; pos "mid"	0	0	0	35.4946
chr16	28588566	28588868	-	repeat_id "AluSq2,chr16,28588566,28588868";repeat_class "SINE";repeat_family "Alu";	chr16	28588610	28588691	exon	assembly	+	gene_id "ENSG00000176476.8"; ID "622273"; transcript_id "transcript33945.chr16.nic"; exon "5"; exon_id "chr16.13458"; pos "mid"	0	0	0	0
chr16	28688395	28688869	+	repeat_id "LTR41B,chr16,28688395,28688869";repeat_class "LTR";repeat_family "ERVL";	chr16	28688558	28688828	exon	assembly	+	gene_id "ENSG00000184110.14"; ID "622461"; transcript_id "ENST00000566501.5"; exon "1"; exon_id "chr16.13532"; pos "first"	0	0	0	0
chr16	31092767	31093079	+	repeat_id "AluSg,chr16,31092767,31093079";repeat_class "SINE";repeat_family "Alu";	chr16	31092783	31092864	exon	assembly	-	gene_id "ENSG00000167397.14"; ID "624905"; transcript_id "ENST00000319788.11"; exon "3"; exon_id "chr16.16387"; pos "mid"	0	17.7992	0	0
chr16	46796709	46797344	+	repeat_id "L1MEf,chr16,46796709,46797344";repeat_class "LINE";repeat_family "L1";	chr16	46796685	46797435	exon	assembly	-	gene_id "ENSG00000155330.9"; ID "625632"; transcript_id "transcript45016.chr16.nnic"; exon "5"; exon_id "chr16.17957"; pos "last"	0	0	0	0
chr16	47462352	47462647	+	repeat_id "AluSx1,chr16,47462352,47462647";repeat_class "SINE";repeat_family "Alu";	chr16	47462341	47462452	exon	assembly	+	gene_id "ENSG00000102893.15"; ID "625865"; transcript_id "transcript45302.chr16.nic"; exon "2"; exon_id "chr16.18081"; pos "mid"	0	0	0	0
chr16	50105202	50105483	+	repeat_id "AluSz,chr16,50105202,50105483";repeat_class "SINE";repeat_family "Alu";	chr16	50105287	50105523	exon	assembly	+	gene_id "ENSG00000155393.12"; ID "626434"; transcript_id "transcript46609.chr16.nnic"; exon "1"; exon_id "chr16.18609"; pos "first"	0	18.3078	0	0
chr16	53702987	53703296	+	repeat_id "AluSz,chr16,53702987,53703296";repeat_class "SINE";repeat_family "Alu";	chr16	53703228	53703261	exon	assembly	-	gene_id "ENSG00000103494.12"; ID "627230"; transcript_id "transcript48234.chr16.nnic"; exon "2"; exon_id "chr16.19322"; pos "mid"	0	0	0	32.5367
chr16	56842551	56842852	-	repeat_id "AluJb,chr16,56842551,56842852";repeat_class "SINE";repeat_family "Alu";	chr16	56842578	56842695	exon	assembly	+	gene_id "ENSG00000102900.12"; ID "627875"; transcript_id "ENST00000569842.5"; exon "22"; exon_id "chr16.20191"; pos "mid"	0	0	0	0
chr16	57641566	57641864	-	repeat_id "AluSz6,chr16,57641566,57641864";repeat_class "SINE";repeat_family "Alu";	chr16	57641591	57641708	exon	assembly	+	gene_id "ENSG00000205336.11"; ID "628419"; transcript_id "ENST00000568908.5"; exon "2"; exon_id "chr16.20837"; pos "mid"	95.2781	0	0	0
chr16	57641566	57641864	-	repeat_id "AluSz6,chr16,57641566,57641864";repeat_class "SINE";repeat_family "Alu";	chr16	57641591	57641708	exon	assembly	+	gene_id "ENSG00000205336.11"; ID "628435"; transcript_id "ENST00000562558.5"; exon "2"; exon_id "chr16.20837"; pos "mid"	95.2781	0	0	0
chr16	57641566	57641864	-	repeat_id "AluSz6,chr16,57641566,57641864";repeat_class "SINE";repeat_family "Alu";	chr16	57641591	57641708	exon	assembly	+	gene_id "ENSG00000205336.11"; ID "628513"; transcript_id "ENST00000567835.5"; exon "2"; exon_id "chr16.20837"; pos "mid"	95.2781	0	0	0
chr16	58527834	58528125	+	repeat_id "AluSz,chr16,58527834,58528125";repeat_class "SINE";repeat_family "Alu";	chr16	58527923	58528105	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "628984"; transcript_id "ENST00000567188.5"; exon "45"; exon_id "chr16.21736"; pos "mid"	0	0	0	0
chr16	58623255	58623702	+	repeat_id "MER21B,chr16,58623255,58623702";repeat_class "LTR";repeat_family "ERVL";	chr16	58623226	58623409	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "628888"; transcript_id "ENST00000569263.1"; exon "2"; exon_id "chr16.21690"; pos "last"	0	0	0	0
chr16	58623255	58623702	+	repeat_id "MER21B,chr16,58623255,58623702";repeat_class "LTR";repeat_family "ERVL";	chr16	58623247	58623409	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "628885"; transcript_id "transcript53656.chr16.nic"; exon "3"; exon_id "chr16.21684"; pos "last"	0	0	0	0
chr16	58623255	58623702	+	repeat_id "MER21B,chr16,58623255,58623702";repeat_class "LTR";repeat_family "ERVL";	chr16	58623282	58623409	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "629028"; transcript_id "ENST00000568158.1"; exon "3"; exon_id "chr16.21686"; pos "mid"	0	0	0	0
chr16	58624523	58624823	+	repeat_id "AluSg,chr16,58624523,58624823";repeat_class "SINE";repeat_family "Alu";	chr16	58624653	58624794	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "628884"; transcript_id "transcript53656.chr16.nic"; exon "2"; exon_id "chr16.21683"; pos "mid"	27.6613	0	0	19.7192
chr16	58624523	58624823	+	repeat_id "AluSg,chr16,58624523,58624823";repeat_class "SINE";repeat_family "Alu";	chr16	58624653	58624794	exon	assembly	-	gene_id "ENSG00000125107.17"; ID "629027"; transcript_id "ENST00000568158.1"; exon "2"; exon_id "chr16.21683"; pos "mid"	27.6613	0	0	19.7192
chr16	67183210	67183556	+	repeat_id "L2b,chr16,67183210,67183556";repeat_class "LINE";repeat_family "L2";	chr16	67183262	67183606	exon	assembly	-	gene_id "ENSG00000196123.12"; ID "630139"; transcript_id "transcript56821.chr16.nic"; exon "1"; exon_id "chr16.22930"; pos "first"	53.7859	0	0	0
chr16	68253365	68253674	-	repeat_id "AluSp,chr16,68253365,68253674";repeat_class "SINE";repeat_family "Alu";	chr16	68253422	68253517	exon	assembly	+	gene_id "ENSG00000103066.12"; ID "631614"; transcript_id "transcript60043.chr16.nic"; exon "3"; exon_id "chr16.24555"; pos "mid"	0	14.7479	0	0
chr16	68273776	68274059	-	repeat_id "AluSc5,chr16,68273776,68274059";repeat_class "SINE";repeat_family "Alu";	chr16	68273818	68273904	exon	assembly	+	gene_id "ENSG00000103064.13"; ID "631680"; transcript_id "ENST00000566454.5"; exon "3"; exon_id "chr16.24578"; pos "mid"	13.3185	0	0	0
chr16	68312015	68312180	-	repeat_id "AluJb,chr16,68312015,68312180";repeat_class "SINE";repeat_family "Alu";	chr16	68312042	68312176	exon	assembly	+	gene_id "ENSG00000132600.16"; ID "631756"; transcript_id "transcript59854.chr16.nic"; exon "2"; exon_id "chr16.24611"; pos "mid"	8.196	0	0	15.7754
chr16	68533674	68533826	-	repeat_id "AluSg4,chr16,68533674,68533826";repeat_class "SINE";repeat_family "Alu";	chr16	68533698	68533855	exon	assembly	+	gene_id "ENSG00000184939.15"; ID "631941"; transcript_id "transcript60741.chr16.nic"; exon "2"; exon_id "chr16.24813"; pos "mid"	0	0	0	0
chr16	69128785	69129096	+	repeat_id "AluSg,chr16,69128785,69129096";repeat_class "SINE";repeat_family "Alu";	chr16	69128939	69129036	exon	assembly	-	gene_id "ENSG00000168802.12"; ID "632369"; transcript_id "transcript61714.chr16.nnic"; exon "2"; exon_id "chr16.25099"; pos "mid"	0	0	0	0
chr16	69775800	69776360	-	repeat_id "L1MCb,chr16,69775800,69776360";repeat_class "LINE";repeat_family "L1";	chr16	69776187	69776241	exon	assembly	+	gene_id "ENSG00000198373.12"; ID "632977"; transcript_id "ENST00000569174.5"; exon "1"; exon_id "chr16.25543"; pos "first"	43.0287	17.2907	36.4686	0
chr16	69775800	69776360	-	repeat_id "L1MCb,chr16,69775800,69776360";repeat_class "LINE";repeat_family "L1";	chr16	69776189	69776241	exon	assembly	+	gene_id "ENSG00000198373.12"; ID "632887"; transcript_id "transcript65954.chr16.nic"; exon "2"; exon_id "chr16.25512"; pos "mid"	43.0287	17.2907	36.4686	0
chr16	72712399	72714824	-	repeat_id "L1M4c,chr16,72712399,72714824";repeat_class "LINE";repeat_family "L1";	chr16	72713333	72713416	exon	assembly	+	gene_id "ENSG00000259768.5"; ID "634948"; transcript_id "transcript70987.chr16.nnic"; exon "2"; exon_id "chr16.27311"; pos "mid"	0	69.1625	0	74.9333
chr16	75379857	75380158	+	repeat_id "AluSz,chr16,75379857,75380158";repeat_class "SINE";repeat_family "Alu";	chr16	75379818	75380134	exon	assembly	-	gene_id "ENSG00000261783.1"; ID "636220"; transcript_id "ENST00000561956.1"; exon "2"; exon_id "chr16.28138"; pos "last"	0	0	0	0
chr16	75381182	75381315	+	repeat_id "AluJb,chr16,75381182,75381315";repeat_class "SINE";repeat_family "Alu";	chr16	75381204	75381260	exon	assembly	-	gene_id "ENSG00000261783.1"; ID "636219"; transcript_id "ENST00000561956.1"; exon "1"; exon_id "chr16.28137"; pos "first"	0	0	0	0
chr16	80980608	80980913	+	repeat_id "AluJr,chr16,80980608,80980913";repeat_class "SINE";repeat_family "Alu";	chr16	80980770	80980879	exon	assembly	-	gene_id "ENSG00000103121.8"; ID "636859"; transcript_id "transcript76638.chr16.nic"; exon "4"; exon_id "chr16.28937"; pos "mid"	0	0	39.784	0
chr16	80980608	80980913	+	repeat_id "AluJr,chr16,80980608,80980913";repeat_class "SINE";repeat_family "Alu";	chr16	80980770	80980879	exon	assembly	-	gene_id "ENSG00000103121.8"; ID "636876"; transcript_id "ENST00000486645.5"; exon "3"; exon_id "chr16.28937"; pos "mid"	0	0	39.784	0
chr16	81664135	81665146	+	repeat_id "L1MC3,chr16,81664135,81665146";repeat_class "LINE";repeat_family "L1";	chr16	81664269	81664349	exon	assembly	+	gene_id "ENSG00000153815.16"; ID "637149"; transcript_id "ENST00000537098.7"; exon "7"; exon_id "chr16.29229"; pos "mid"	54.2982	0	0	0
chr16	84502618	84502887	+	repeat_id "AluSz,chr16,84502618,84502887";repeat_class "SINE";repeat_family "Alu";	chr16	84502721	84502862	exon	assembly	-	gene_id "ENSG00000140950.15"; ID "637810"; transcript_id "transcript78947.chr16.nic"; exon "2"; exon_id "chr16.29974"; pos "mid"	78.8861	0	44.2044	0
chr16	88657108	88657239	-	repeat_id "AluJr,chr16,88657108,88657239";repeat_class "SINE";repeat_family "Alu";	chr16	88657099	88657247	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639262"; transcript_id "transcript82152.chr16.nic"; exon "5"; exon_id "chr16.31289"; pos "last"	18.441	38.6496	0	0
chr16	88657108	88657239	-	repeat_id "AluJr,chr16,88657108,88657239";repeat_class "SINE";repeat_family "Alu";	chr16	88657146	88657247	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639250"; transcript_id "transcript81988.chr16.nic"; exon "5"; exon_id "chr16.31288"; pos "mid"	18.441	38.6496	0	0
chr16	88660372	88660672	+	repeat_id "AluSz,chr16,88660372,88660672";repeat_class "SINE";repeat_family "Alu";	chr16	88660520	88660637	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639235"; transcript_id "transcript81980.chr16.nic"; exon "3"; exon_id "chr16.31277"; pos "mid"	27.6612	0	0	0
chr16	88660726	88661031	+	repeat_id "AluSg,chr16,88660726,88661031";repeat_class "SINE";repeat_family "Alu";	chr16	88660748	88660841	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639234"; transcript_id "transcript81980.chr16.nic"; exon "2"; exon_id "chr16.31276"; pos "mid"	16.9043	0	0	0
chr16	88662009	88662434	+	repeat_id "L1MD1,chr16,88662009,88662434";repeat_class "LINE";repeat_family "L1";	chr16	88662102	88662167	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639323"; transcript_id "ENST00000562741.1"; exon "2"; exon_id "chr16.31308"; pos "last"	17.4165	0	0	0
chr16	88662009	88662434	+	repeat_id "L1MD1,chr16,88662009,88662434";repeat_class "LINE";repeat_family "L1";	chr16	88662115	88662167	exon	assembly	-	gene_id "ENSG00000167508.11"; ID "639286"; transcript_id "transcript82239.chr16.nic"; exon "3"; exon_id "chr16.31299"; pos "last"	17.4165	0	0	0
chr16	89563331	89563590	+	repeat_id "AluSx4,chr16,89563331,89563590";repeat_class "SINE";repeat_family "Alu";	chr16	89563372	89563438	exon	assembly	+	gene_id "ENSG00000167526.13"; ID "640156"; transcript_id "transcript83210.chr16.nnic"; exon "7"; exon_id "chr16.31936"; pos "last"	0	32.5469	0	0
chr16	89694147	89694260	-	repeat_id "LFSINE_Vert,chr16,89694147,89694260";repeat_class "SINE";repeat_family "tRNA";	chr16	89694173	89694232	exon	assembly	+	gene_id "ENSG00000185324.21"; ID "640360"; transcript_id "transcript84845.chr16.nic"; exon "9"; exon_id "chr16.32259"; pos "mid"	226.413	0	251.966	13.8034
chr16	89694147	89694260	-	repeat_id "LFSINE_Vert,chr16,89694147,89694260";repeat_class "SINE";repeat_family "tRNA";	chr16	89694173	89694232	exon	assembly	+	gene_id "ENSG00000185324.21"; ID "640388"; transcript_id "ENST00000353379.11"; exon "9"; exon_id "chr16.32259"; pos "mid"	226.413	0	251.966	13.8034
chr17	780543	780763	+	repeat_id "AluY,chr17,780543,780763";repeat_class "SINE";repeat_family "Alu";	chr17	780684	780738	exon	assembly	-	gene_id "ENSG00000167699.13"; ID "641379"; transcript_id "ENST00000301328.9"; exon "2"; exon_id "chr17.149"; pos "mid"	0	20.3419	41.9942	36.4805
chr17	1369700	1370119	-	repeat_id "Tigger1,chr17,1369700,1370119";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr17	1369709	1369741	exon	assembly	-	gene_id "ENSG00000108953.16"; ID "641801"; transcript_id "ENST00000571732.5"; exon "2"; exon_id "chr17.574"; pos "mid"	28.1737	9.15381	19.892	0
chr17	1711538	1712277	-	repeat_id "L1ME4a,chr17,1711538,1712277";repeat_class "LINE";repeat_family "L1";	chr17	1711493	1712399	exon	assembly	-	gene_id "ENSG00000186594.14"; ID "642314"; transcript_id "ENST00000334146.7"; exon "4"; exon_id "chr17.982"; pos "last"	15.3674	8.64535	0	0
chr17	5113251	5113468	-	repeat_id "MIRb,chr17,5113251,5113468";repeat_class "SINE";repeat_family "MIR";	chr17	5113386	5113452	exon	assembly	+	gene_id "ENSG00000234327.7"; ID "645080"; transcript_id "ENST00000413077.1"; exon "2"; exon_id "chr17.3426"; pos "mid"	46.6145	27.4614	22.1022	0
chr17	5488207	5488566	-	repeat_id "L2c,chr17,5488207,5488566";repeat_class "LINE";repeat_family "L2";	chr17	5488196	5488589	exon	assembly	+	gene_id "ENSG00000167842.15"; ID "645401"; transcript_id "ENST00000611091.4"; exon "2"; exon_id "chr17.3717"; pos "mid"	0	0	0	3.94384
chr17	5488207	5488566	-	repeat_id "L2c,chr17,5488207,5488566";repeat_class "LINE";repeat_family "L2";	chr17	5488196	5488589	exon	assembly	+	gene_id "ENSG00000167842.15"; ID "645416"; transcript_id "ENST00000381165.3"; exon "2"; exon_id "chr17.3717"; pos "mid"	0	0	0	3.94384
chr17	14041837	14042000	+	repeat_id "AluJb,chr17,14041837,14042000";repeat_class "SINE";repeat_family "Alu";	chr17	14041861	14041978	exon	assembly	-	gene_id "ENSG00000236088.9"; ID "649403"; transcript_id "transcript22830.chr17.nnic"; exon "2"; exon_id "chr17.8049"; pos "mid"	0	0	0	0
chr17	18360275	18360589	+	repeat_id "AluJb,chr17,18360275,18360589";repeat_class "SINE";repeat_family "Alu";	chr17	18360414	18360552	exon	assembly	-	gene_id "ENSG00000176974.19"; ID "652013"; transcript_id "transcript29242.chr17.nic"; exon "2"; exon_id "chr17.10279"; pos "mid"	78.8861	22.3762	0	0
chr17	18360275	18360589	+	repeat_id "AluJb,chr17,18360275,18360589";repeat_class "SINE";repeat_family "Alu";	chr17	18360414	18360552	exon	assembly	-	gene_id "ENSG00000176974.19"; ID "652027"; transcript_id "transcript29275.chr17.nic"; exon "2"; exon_id "chr17.10279"; pos "mid"	78.8861	22.3762	0	0
chr17	19285636	19285800	-	repeat_id "AmnSINE1,chr17,19285636,19285800";repeat_class "SINE";repeat_family "5S-Deu-L2";	chr17	19285620	19285790	exon	assembly	+	gene_id "ENSG00000072134.15"; ID "652456"; transcript_id "ENST00000314728.9"; exon "4"; exon_id "chr17.11016"; pos "mid"	0	0	0	0
chr17	19684813	19685794	+	repeat_id "SVA_A,chr17,19684813,19685794";repeat_class "Retroposon";repeat_family "SVA";	chr17	19685275	19685827	exon	assembly	+	gene_id "ENSG00000072210.18"; ID "652830"; transcript_id "transcript32180.chr17.nnic"; exon "10"; exon_id "chr17.11368"; pos "last"	0	0	0	0
chr17	29673591	29674214	-	repeat_id "L1ME4a,chr17,29673591,29674214";repeat_class "LINE";repeat_family "L1";	chr17	29673901	29674159	exon	assembly	-	gene_id "ENSG00000141298.17"; ID "655731"; transcript_id "ENST00000579040.5"; exon "8"; exon_id "chr17.14272"; pos "last"	0	0	0	0
chr17	29673591	29674214	-	repeat_id "L1ME4a,chr17,29673591,29674214";repeat_class "LINE";repeat_family "L1";	chr17	29673914	29674159	exon	assembly	-	gene_id "ENSG00000141298.17"; ID "655739"; transcript_id "ENST00000324677.11"; exon "7"; exon_id "chr17.14274"; pos "last"	0	0	0	0
chr17	29928369	29928602	-	repeat_id "L3,chr17,29928369,29928602";repeat_class "LINE";repeat_family "CR1";	chr17	29928492	29928584	exon	assembly	-	gene_id "ENSG00000141298.17"; ID "655705"; transcript_id "transcript39944.chr17.nnic"; exon "2"; exon_id "chr17.14254"; pos "mid"	0	0	0	0
chr17	30156519	30156817	-	repeat_id "AluSp,chr17,30156519,30156817";repeat_class "SINE";repeat_family "Alu";	chr17	30156540	30156662	exon	assembly	+	gene_id "ENSG00000126653.17"; ID "655957"; transcript_id "ENST00000589608.1"; exon "2"; exon_id "chr17.14535"; pos "mid"	0	0	0	0
chr17	30993821	30994104	-	repeat_id "AluJb,chr17,30993821,30994104";repeat_class "SINE";repeat_family "Alu";	chr17	30993840	30993904	exon	assembly	+	gene_id "ENSG00000181481.13"; ID "656715"; transcript_id "ENST00000535306.6"; exon "4"; exon_id "chr17.14975"; pos "mid"	0	0	0	0
chr17	31866447	31866735	+	repeat_id "AluSg,chr17,31866447,31866735";repeat_class "SINE";repeat_family "Alu";	chr17	31866655	31866715	exon	assembly	-	gene_id "ENSG00000108651.9"; ID "657331"; transcript_id "transcript43620.chr17.nic"; exon "18"; exon_id "chr17.15520"; pos "mid"	0	25.4273	0	0
chr17	35366790	35367087	+	repeat_id "AluJb,chr17,35366790,35367087";repeat_class "SINE";repeat_family "Alu";	chr17	35366947	35367063	exon	assembly	-	gene_id "ENSG00000172716.16"; ID "658621"; transcript_id "transcript47698.chr17.nic"; exon "3"; exon_id "chr17.16559"; pos "mid"	11.2695	101.709	0	55.2138
chr17	35366790	35367087	+	repeat_id "AluJb,chr17,35366790,35367087";repeat_class "SINE";repeat_family "Alu";	chr17	35366947	35367063	exon	assembly	-	gene_id "ENSG00000172716.16"; ID "658636"; transcript_id "ENST00000394566.5"; exon "3"; exon_id "chr17.16559"; pos "mid"	11.2695	101.709	0	55.2138
chr17	35430209	35430954	-	repeat_id "MER57-int,chr17,35430209,35430954";repeat_class "LTR";repeat_family "ERV1";	chr17	35430471	35430592	exon	assembly	-	gene_id "ENSG00000172123.12"; ID "658715"; transcript_id "ENST00000394562.5"; exon "3"; exon_id "chr17.16632"; pos "mid"	0	0	0	0
chr17	35432211	35432724	-	repeat_id "MER51A,chr17,35432211,35432724";repeat_class "LTR";repeat_family "ERV1";	chr17	35432188	35432524	exon	assembly	-	gene_id "ENSG00000172123.12"; ID "658720"; transcript_id "ENST00000304905.9"; exon "1"; exon_id "chr17.16634"; pos "first"	0	0	0	0
chr17	35432211	35432724	-	repeat_id "MER51A,chr17,35432211,35432724";repeat_class "LTR";repeat_family "ERV1";	chr17	35432188	35432614	exon	assembly	-	gene_id "ENSG00000172123.12"; ID "658693"; transcript_id "transcript47883.chr17.nic"; exon "1"; exon_id "chr17.16621"; pos "first"	0	0	0	0
chr17	37639456	37639756	+	repeat_id "AluY,chr17,37639456,37639756";repeat_class "SINE";repeat_family "Alu";	chr17	37639454	37639568	exon	assembly	-	gene_id "ENSG00000278053.4"; ID "659973"; transcript_id "ENST00000620209.4"; exon "3"; exon_id "chr17.17831"; pos "mid"	0	0	0	0
chr17	38681838	38682151	+	repeat_id "AluSz,chr17,38681838,38682151";repeat_class "SINE";repeat_family "Alu";	chr17	38682001	38682122	exon	assembly	-	gene_id "ENSG00000275532.1"; ID "660358"; transcript_id "transcript53084.chr17.nnic"; exon "3"; exon_id "chr17.18250"; pos "mid"	0	5.59405	0	0
chr17	40523323	40523638	-	repeat_id "L2c,chr17,40523323,40523638";repeat_class "LINE";repeat_family "L2";	chr17	40523370	40523655	exon	assembly	+	gene_id "ENSG00000266088.5"; ID "662473"; transcript_id "ENST00000578280.5"; exon "3"; exon_id "chr17.19876"; pos "mid"	0	0	0	0
chr17	41820686	41820792	-	repeat_id "MIRb,chr17,41820686,41820792";repeat_class "SINE";repeat_family "MIR";	chr17	41820707	41820763	exon	assembly	+	gene_id "ENSG00000141756.18"; ID "663022"; transcript_id "transcript62243.chr17.nnic"; exon "8"; exon_id "chr17.20529"; pos "mid"	106.035	42.2094	11.0511	38.4524
chr17	42137607	42137911	+	repeat_id "AluSc,chr17,42137607,42137911";repeat_class "SINE";repeat_family "Alu";	chr17	42137762	42137878	exon	assembly	-	gene_id "ENSG00000108774.14"; ID "663677"; transcript_id "transcript64296.chr17.nnic"; exon "2"; exon_id "chr17.20915"; pos "mid"	0	0	0	0
chr17	42137607	42137911	+	repeat_id "AluSc,chr17,42137607,42137911";repeat_class "SINE";repeat_family "Alu";	chr17	42137762	42137878	exon	assembly	-	gene_id "ENSG00000108774.14"; ID "663686"; transcript_id "transcript64314.chr17.nic"; exon "2"; exon_id "chr17.20915"; pos "mid"	0	0	0	0
chr17	42137607	42137911	+	repeat_id "AluSc,chr17,42137607,42137911";repeat_class "SINE";repeat_family "Alu";	chr17	42137762	42137878	exon	assembly	-	gene_id "ENSG00000108774.14"; ID "663701"; transcript_id "transcript64380.chr17.nnic"; exon "2"; exon_id "chr17.20915"; pos "mid"	0	0	0	0
chr17	42825716	42825915	-	repeat_id "AluJb,chr17,42825716,42825915";repeat_class "SINE";repeat_family "Alu";	chr17	42825758	42825858	exon	assembly	+	gene_id "ENSG00000131467.10"; ID "664666"; transcript_id "ENST00000545225.5"; exon "2"; exon_id "chr17.21761"; pos "mid"	0	0	0	0
chr17	43027174	43027300	-	repeat_id "X6A_LINE,chr17,43027174,43027300";repeat_class "LINE";repeat_family "CR1";	chr17	43027183	43027292	exon	assembly	+	gene_id "ENSG00000108830.9"; ID "664964"; transcript_id "ENST00000587250.3"; exon "3"; exon_id "chr17.22048"; pos "mid"	0	0	0	0
chr17	43148328	43148734	-	repeat_id "LTR7C,chr17,43148328,43148734";repeat_class "LTR";repeat_family "ERV1";	chr17	43148366	43148783	exon	assembly	-	gene_id "ENSG00000267002.2"; ID "665136"; transcript_id "transcript70087.chr17.nnic"; exon "3"; exon_id "chr17.22133"; pos "last"	0	0	0	0
chr17	43148328	43148734	-	repeat_id "LTR7C,chr17,43148328,43148734";repeat_class "LTR";repeat_family "ERV1";	chr17	43148366	43148783	exon	assembly	-	gene_id "ENSG00000267002.2"; ID "665139"; transcript_id "transcript70192.chr17.nnic"; exon "2"; exon_id "chr17.22133"; pos "last"	0	0	0	0
chr17	43166029	43167245	-	repeat_id "Harlequin-int,chr17,43166029,43167245";repeat_class "LTR";repeat_family "ERV1";	chr17	43166980	43167262	exon	assembly	-	gene_id "ENSG00000267002.2"; ID "665135"; transcript_id "transcript70087.chr17.nnic"; exon "2"; exon_id "chr17.22137"; pos "mid"	16.9043	0	0	36.4805
chr17	43290295	43290481	-	repeat_id "U2,chr17,43290295,43290481";repeat_class "snRNA";repeat_family "snRNA";	chr17	43290291	43290481	exon	assembly	-	gene_id "ENSG00000274452.1"; ID "665274"; transcript_id "ENST00000619225.1"; exon "1"; exon_id "chr17.22196";	42.0041	20.8505	0	0
chr17	43773818	43774135	+	repeat_id "AluSp,chr17,43773818,43774135";repeat_class "SINE";repeat_family "Alu";	chr17	43774035	43774109	exon	assembly	-	gene_id "ENSG00000108861.8"; ID "665613"; transcript_id "transcript71097.chr17.nic"; exon "3"; exon_id "chr17.22528"; pos "mid"	0	0	0	0
chr17	44022831	44023425	-	repeat_id "LTR66,chr17,44022831,44023425";repeat_class "LTR";repeat_family "ERVL";	chr17	44023039	44023151	exon	assembly	-	gene_id "ENSG00000091947.9"; ID "665766"; transcript_id "ENST00000589334.5"; exon "1"; exon_id "chr17.22623"; pos "first"	0	0	0	0
chr17	44067468	44067627	-	repeat_id "MIRb,chr17,44067468,44067627";repeat_class "SINE";repeat_family "MIR";	chr17	44067443	44067619	exon	assembly	-	gene_id "ENSG00000161654.9"; ID "665786"; transcript_id "ENST00000591247.5"; exon "1"; exon_id "chr17.22755"; pos "first"	0	0	0	0
chr17	44181586	44181776	+	repeat_id "AluSx,chr17,44181586,44181776";repeat_class "SINE";repeat_family "Alu";	chr17	44181623	44181720	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666037"; transcript_id "transcript72416.chr17.nic"; exon "3"; exon_id "chr17.22882"; pos "mid"	46.6144	18.3078	0	0
chr17	44181586	44181776	+	repeat_id "AluSx,chr17,44181586,44181776";repeat_class "SINE";repeat_family "Alu";	chr17	44181623	44181720	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666042"; transcript_id "transcript72419.chr17.nnic"; exon "3"; exon_id "chr17.22882"; pos "mid"	46.6144	18.3078	0	0
chr17	44181586	44181776	+	repeat_id "AluSx,chr17,44181586,44181776";repeat_class "SINE";repeat_family "Alu";	chr17	44181623	44181720	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666050"; transcript_id "transcript72530.chr17.nnic"; exon "2"; exon_id "chr17.22882"; pos "mid"	46.6144	18.3078	0	0
chr17	44181586	44181776	+	repeat_id "AluSx,chr17,44181586,44181776";repeat_class "SINE";repeat_family "Alu";	chr17	44181623	44181720	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666062"; transcript_id "ENST00000585457.5"; exon "3"; exon_id "chr17.22882"; pos "mid"	46.6144	18.3078	0	0
chr17	44181586	44181776	+	repeat_id "AluSx,chr17,44181586,44181776";repeat_class "SINE";repeat_family "Alu";	chr17	44181623	44181741	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666046"; transcript_id "transcript72527.chr17.nnic"; exon "2"; exon_id "chr17.22886"; pos "mid"	46.6144	18.3078	0	0
chr17	44182782	44183126	+	repeat_id "AluJr,chr17,44182782,44183126";repeat_class "SINE";repeat_family "Alu";	chr17	44182930	44183093	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666036"; transcript_id "transcript72416.chr17.nic"; exon "2"; exon_id "chr17.22881"; pos "mid"	112.694	17.2905	79.5682	35.4946
chr17	44182782	44183126	+	repeat_id "AluJr,chr17,44182782,44183126";repeat_class "SINE";repeat_family "Alu";	chr17	44182930	44183093	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666041"; transcript_id "transcript72419.chr17.nnic"; exon "2"; exon_id "chr17.22881"; pos "mid"	112.694	17.2905	79.5682	35.4946
chr17	44182782	44183126	+	repeat_id "AluJr,chr17,44182782,44183126";repeat_class "SINE";repeat_family "Alu";	chr17	44182930	44183093	exon	assembly	-	gene_id "ENSG00000267080.5"; ID "666061"; transcript_id "ENST00000585457.5"; exon "2"; exon_id "chr17.22881"; pos "mid"	112.694	17.2905	79.5682	35.4946
chr17	44187891	44188045	-	repeat_id "L2c,chr17,44187891,44188045";repeat_class "LINE";repeat_family "L2";	chr17	44187907	44188009	exon	assembly	+	gene_id "ENSG00000168591.15"; ID "666090"; transcript_id "transcript72354.chr17.nic"; exon "2"; exon_id "chr17.22898"; pos "mid"	0	0	0	0
chr17	45629832	45630451	-	repeat_id "L3,chr17,45629832,45630451";repeat_class "LINE";repeat_family "CR1";	chr17	45629904	45630158	exon	assembly	+	gene_id "ENSG00000204650.14"; ID "667898"; transcript_id "ENST00000455565.5"; exon "3"; exon_id "chr17.24442"; pos "mid"	19.4655	23.9018	0	0
chr17	46339372	46339792	-	repeat_id "LTR33B,chr17,46339372,46339792";repeat_class "LTR";repeat_family "ERVL";	chr17	46339509	46339774	exon	assembly	-	gene_id "ENSG00000228696.8"; ID "668161"; transcript_id "transcript77422.chr17.nnic"; exon "4"; exon_id "chr17.24629"; pos "mid"	0	0	0	0
chr17	46557228	46557648	-	repeat_id "LTR33B,chr17,46557228,46557648";repeat_class "LTR";repeat_family "ERVL";	chr17	46557365	46557630	exon	assembly	-	gene_id "ENSG00000185829.17"; ID "668256"; transcript_id "transcript77382.chr17.nnic"; exon "4"; exon_id "chr17.24674"; pos "mid"	29.7102	0	0	0
chr17	47636163	47636654	-	repeat_id "HAL1,chr17,47636163,47636654";repeat_class "LINE";repeat_family "L1";	chr17	47636512	47636601	exon	assembly	-	gene_id "ENSG00000263766.5"; ID "668857"; transcript_id "transcript79905.chr17.nnic"; exon "2"; exon_id "chr17.25272"; pos "mid"	20.49	17.2907	0	0
chr17	47891262	47891460	-	repeat_id "L1PA6,chr17,47891262,47891460";repeat_class "LINE";repeat_family "L1";	chr17	47891229	47891397	exon	assembly	-	gene_id "ENSG00000264920.1"; ID "669008"; transcript_id "transcript80738.chr17.nnic"; exon "4"; exon_id "chr17.25615"; pos "last"	0	0	0	4.9298
chr17	48839348	48839648	-	repeat_id "AluSx1,chr17,48839348,48839648";repeat_class "SINE";repeat_family "Alu";	chr17	48839376	48839511	exon	assembly	+	gene_id "ENSG00000136436.14"; ID "669602"; transcript_id "transcript82108.chr17.nic"; exon "2"; exon_id "chr17.26206"; pos "mid"	0	0	0	0
chr17	48934345	48934621	+	repeat_id "AluSg4,chr17,48934345,48934621";repeat_class "SINE";repeat_family "Alu";	chr17	48934479	48934576	exon	assembly	-	gene_id "ENSG00000159210.9"; ID "669786"; transcript_id "ENST00000510558.6"; exon "6"; exon_id "chr17.26395"; pos "mid"	0	0	0	0
chr17	49675738	49676044	+	repeat_id "AluSz,chr17,49675738,49676044";repeat_class "SINE";repeat_family "Alu";	chr17	49675895	49676016	exon	assembly	-	gene_id "ENSG00000121067.17"; ID "670056"; transcript_id "ENST00000393328.6"; exon "2"; exon_id "chr17.26711"; pos "mid"	0	0	0	0
chr17	50547442	50547788	+	repeat_id "L2c,chr17,50547442,50547788";repeat_class "LINE";repeat_family "L2";	chr17	50547665	50547703	exon	assembly	+	gene_id "ENSG00000006282.20"; ID "670966"; transcript_id "transcript87075.chr17.nnic"; exon "2"; exon_id "chr17.27683"; pos "mid"	106.547	68.1453	75.1478	36.4805
chr17	50547442	50547788	+	repeat_id "L2c,chr17,50547442,50547788";repeat_class "LINE";repeat_family "L2";	chr17	50547665	50547767	exon	assembly	+	gene_id "ENSG00000006282.20"; ID "670929"; transcript_id "ENST00000503127.5"; exon "2"; exon_id "chr17.27606"; pos "mid"	106.547	68.1453	75.1478	36.4805
chr17	50547442	50547788	+	repeat_id "L2c,chr17,50547442,50547788";repeat_class "LINE";repeat_family "L2";	chr17	50547720	50547767	exon	assembly	+	gene_id "ENSG00000006282.20"; ID "670973"; transcript_id "ENST00000006658.10"; exon "2"; exon_id "chr17.27622"; pos "mid"	106.547	68.1453	75.1478	36.4805
chr17	50737198	50737531	+	repeat_id "HAL1,chr17,50737198,50737531";repeat_class "LINE";repeat_family "L1";	chr17	50737287	50737479	exon	assembly	+	gene_id "ENSG00000108848.15"; ID "671202"; transcript_id "ENST00000508045.5"; exon "3"; exon_id "chr17.27830"; pos "mid"	142.404	155.615	47.5197	75.9189
chr17	50738090	50739377	+	repeat_id "HAL1,chr17,50738090,50739377";repeat_class "LINE";repeat_family "L1";	chr17	50738137	50738199	exon	assembly	+	gene_id "ENSG00000108848.15"; ID "671203"; transcript_id "ENST00000508045.5"; exon "4"; exon_id "chr17.27831"; pos "mid"	15.3675	0	36.4686	37.4665
chr17	59089824	59090117	+	repeat_id "AluJb,chr17,59089824,59090117";repeat_class "SINE";repeat_family "Alu";	chr17	59090017	59090092	exon	assembly	-	gene_id "ENSG00000108395.13"; ID "673204"; transcript_id "ENST00000577554.5"; exon "4"; exon_id "chr17.29618"; pos "mid"	0	0	0	0
chr17	59209374	59209528	-	repeat_id "AluSx3,chr17,59209374,59209528";repeat_class "SINE";repeat_family "Alu";	chr17	59209384	59209511	exon	assembly	+	gene_id "ENSG00000167447.12"; ID "673403"; transcript_id "transcript96276.chr17.nnic"; exon "1"; exon_id "chr17.29749"; pos "first"	0	0	0	0
chr17	59209374	59209528	-	repeat_id "AluSx3,chr17,59209374,59209528";repeat_class "SINE";repeat_family "Alu";	chr17	59209400	59209511	exon	assembly	+	gene_id "ENSG00000167447.12"; ID "673412"; transcript_id "ENST00000543872.6"; exon "1"; exon_id "chr17.29755"; pos "first"	0	0	0	0
chr17	63775071	63775195	+	repeat_id "L2c,chr17,63775071,63775195";repeat_class "LINE";repeat_family "L2";	chr17	63775108	63775178	exon	assembly	+	gene_id "ENSG00000198231.12"; ID "676137"; transcript_id "ENST00000578681.5"; exon "2"; exon_id "chr17.31727"; pos "mid"	0	0	0	0
chr17	64468278	64468588	-	repeat_id "AluSx1,chr17,64468278,64468588";repeat_class "SINE";repeat_family "Alu";	chr17	64468310	64468642	exon	assembly	+	gene_id "ENSG00000271605.5"; ID "676670"; transcript_id "ENST00000619286.4"; exon "10"; exon_id "chr17.32445"; pos "last"	0	0	0	0
chr17	64764424	64764603	+	repeat_id "AluSg4,chr17,64764424,64764603";repeat_class "SINE";repeat_family "Alu";	chr17	64764451	64764548	exon	assembly	-	gene_id "ENSG00000215769.8"; ID "677158"; transcript_id "transcript105033.chr17.nnic"; exon "2"; exon_id "chr17.32794"; pos "mid"	0	0	0	0
chr17	64820737	64821018	-	repeat_id "AluY,chr17,64820737,64821018";repeat_class "SINE";repeat_family "Alu";	chr17	64820694	64821017	exon	assembly	-	gene_id "ENSG00000214176.9"; ID "677235"; transcript_id "ENST00000584585.1"; exon "6"; exon_id "chr17.32846"; pos "last"	0	0	0	0
chr17	67362720	67362905	+	repeat_id "MIR,chr17,67362720,67362905";repeat_class "SINE";repeat_family "MIR";	chr17	67362776	67362892	exon	assembly	-	gene_id "ENSG00000197170.9"; ID "678396"; transcript_id "ENST00000584008.5"; exon "2"; exon_id "chr17.33536"; pos "mid"	73.7636	16.7821	36.4686	0
chr17	69250698	69251482	-	repeat_id "L1MD3,chr17,69250698,69251482";repeat_class "LINE";repeat_family "L1";	chr17	69250715	69250787	exon	assembly	-	gene_id "ENSG00000154265.15"; ID "679475"; transcript_id "transcript109197.chr17.nnic"; exon "1"; exon_id "chr17.34465"; pos "first"	0	0	0	0
chr17	69325642	69325831	+	repeat_id "AluJr,chr17,69325642,69325831";repeat_class "SINE";repeat_family "Alu";	chr17	69325699	69325817	exon	assembly	-	gene_id "ENSG00000154265.15"; ID "679468"; transcript_id "transcript109182.chr17.nic"; exon "2"; exon_id "chr17.34457"; pos "mid"	39.4431	36.6152	0	0
chr17	75288214	75288447	+	repeat_id "L2b,chr17,75288214,75288447";repeat_class "LINE";repeat_family "L2";	chr17	75288388	75288461	exon	assembly	-	gene_id "ENSG00000125454.11"; ID "681172"; transcript_id "ENST00000320362.7"; exon "3"; exon_id "chr17.36181"; pos "mid"	81.9594	16.2736	141.455	126.204
chr17	76566576	76566851	+	repeat_id "AluJo,chr17,76566576,76566851";repeat_class "SINE";repeat_family "Alu";	chr17	76566693	76566717	exon	assembly	-	gene_id "ENSG00000070731.10"; ID "682702"; transcript_id "transcript118370.chr17.nnic"; exon "2"; exon_id "chr17.37851"; pos "mid"	0	0	0	0
chr17	76566576	76566851	+	repeat_id "AluJo,chr17,76566576,76566851";repeat_class "SINE";repeat_family "Alu";	chr17	76566693	76566717	exon	assembly	-	gene_id "ENSG00000070731.10"; ID "682706"; transcript_id "transcript118373.chr17.nnic"; exon "2"; exon_id "chr17.37851"; pos "mid"	0	0	0	0
chr17	76583094	76583394	+	repeat_id "AluY,chr17,76583094,76583394";repeat_class "SINE";repeat_family "Alu";	chr17	76583358	76583394	exon	assembly	-	gene_id "ENSG00000070731.10"; ID "682701"; transcript_id "transcript118370.chr17.nnic"; exon "1"; exon_id "chr17.37850"; pos "first"	0	0	0	0
chr17	76583094	76583394	+	repeat_id "AluY,chr17,76583094,76583394";repeat_class "SINE";repeat_family "Alu";	chr17	76583358	76583394	exon	assembly	-	gene_id "ENSG00000070731.10"; ID "682705"; transcript_id "transcript118373.chr17.nnic"; exon "1"; exon_id "chr17.37850"; pos "first"	0	0	0	0
chr17	76721200	76721415	+	repeat_id "LFSINE_Vert,chr17,76721200,76721415";repeat_class "SINE";repeat_family "tRNA";	chr17	76721263	76721356	exon	assembly	-	gene_id "ENSG00000070495.14"; ID "682776"; transcript_id "ENST00000542934.5"; exon "5"; exon_id "chr17.37962"; pos "mid"	0	0	0	0
chr17	76721200	76721415	+	repeat_id "LFSINE_Vert,chr17,76721200,76721415";repeat_class "SINE";repeat_family "tRNA";	chr17	76721263	76721356	exon	assembly	-	gene_id "ENSG00000070495.14"; ID "682797"; transcript_id "ENST00000617192.4"; exon "5"; exon_id "chr17.37962"; pos "mid"	0	0	0	0
chr17	76721200	76721415	+	repeat_id "LFSINE_Vert,chr17,76721200,76721415";repeat_class "SINE";repeat_family "tRNA";	chr17	76721263	76721382	exon	assembly	-	gene_id "ENSG00000070495.14"; ID "682802"; transcript_id "ENST00000591460.1"; exon "1"; exon_id "chr17.37971"; pos "first"	0	0	0	0
chr17	78215968	78216272	+	repeat_id "AluY,chr17,78215968,78216272";repeat_class "SINE";repeat_family "Alu";	chr17	78215966	78216034	exon	assembly	+	gene_id "ENSG00000089685.14"; ID "683663"; transcript_id "ENST00000301633.8"; exon "3"; exon_id "chr17.38791"; pos "mid"	0	0	28.7329	0
chr17	78997763	78997977	+	repeat_id "Tigger19b,chr17,78997763,78997977";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr17	78997840	78997963	exon	assembly	-	gene_id "ENSG00000171302.16"; ID "684180"; transcript_id "transcript122431.chr17.nnic"; exon "2"; exon_id "chr17.39318"; pos "mid"	145.478	123.577	37.5737	0
chr17	78997763	78997977	+	repeat_id "Tigger19b,chr17,78997763,78997977";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr17	78997840	78997963	exon	assembly	-	gene_id "ENSG00000171302.16"; ID "684184"; transcript_id "ENST00000392446.9"; exon "2"; exon_id "chr17.39318"; pos "mid"	145.478	123.577	37.5737	0
chr17	80211808	80211996	+	repeat_id "MIRb,chr17,80211808,80211996";repeat_class "SINE";repeat_family "MIR";	chr17	80211869	80211923	exon	assembly	-	gene_id "ENSG00000181523.12"; ID "684555"; transcript_id "transcript122882.chr17.nic"; exon "8"; exon_id "chr17.39745"; pos "mid"	0	36.6152	0	0
chr17	81826379	81826537	+	repeat_id "AluJb,chr17,81826379,81826537";repeat_class "SINE";repeat_family "Alu";	chr17	81826380	81826515	exon	assembly	-	gene_id "ENSG00000225663.7"; ID "685895"; transcript_id "ENST00000572645.5"; exon "2"; exon_id "chr17.41085"; pos "mid"	0	0	0	0
chr18	3596598	3596706	+	repeat_id "L2a,chr18,3596598,3596706";repeat_class "LINE";repeat_family "L2";	chr18	3596579	3596675	exon	assembly	+	gene_id "ENSG00000177337.7"; ID "688755"; transcript_id "transcript3579.chr18.nic"; exon "3"; exon_id "chr18.954"; pos "mid"	0	0	0	70.9893
chr18	9387788	9388262	-	repeat_id "L1MC5a,chr18,9387788,9388262";repeat_class "LINE";repeat_family "L1";	chr18	9388040	9388140	exon	assembly	+	gene_id "ENSG00000128791.11"; ID "689899"; transcript_id "ENST00000583147.5"; exon "4"; exon_id "chr18.1905"; pos "mid"	0	0	0	0
chr18	9388367	9388472	+	repeat_id "L1MEi,chr18,9388367,9388472";repeat_class "LINE";repeat_family "L1";	chr18	9388364	9388420	exon	assembly	+	gene_id "ENSG00000128791.11"; ID "689900"; transcript_id "ENST00000583147.5"; exon "5"; exon_id "chr18.1917"; pos "mid"	0	0	0	0
chr18	13687242	13687963	+	repeat_id "MER50B,chr18,13687242,13687963";repeat_class "LTR";repeat_family "ERV1";	chr18	13687743	13687882	exon	assembly	-	gene_id "ENSG00000177150.12"; ID "691192"; transcript_id "transcript9920.chr18.nic"; exon "2"; exon_id "chr18.3213"; pos "mid"	0	0	0	0
chr18	13730417	13730820	-	repeat_id "MER119,chr18,13730417,13730820";repeat_class "DNA";repeat_family "hAT-Charlie";	chr18	13730627	13730755	exon	assembly	+	gene_id "ENSG00000101654.17"; ID "691230"; transcript_id "ENST00000591746.1"; exon "2"; exon_id "chr18.3230"; pos "mid"	250.488	158.667	114.932	307.622
chr18	13730417	13730820	-	repeat_id "MER119,chr18,13730417,13730820";repeat_class "DNA";repeat_family "hAT-Charlie";	chr18	13730627	13730755	exon	assembly	+	gene_id "ENSG00000101654.17"; ID "691246"; transcript_id "ENST00000592764.5"; exon "2"; exon_id "chr18.3230"; pos "mid"	250.488	158.667	114.932	307.622
chr18	14971323	14971848	+	repeat_id "MLT1G3,chr18,14971323,14971848";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	14971376	14971560	exon	assembly	-	gene_id "ENSG00000264301.1"; ID "691499"; transcript_id "transcript10663.chr18.nnic"; exon "1"; exon_id "chr18.3553"; pos "first"	0	0	0	0
chr18	36179947	36180408	-	repeat_id "MLT1J,chr18,36179947,36180408";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	36179996	36180390	exon	assembly	-	gene_id "ENSG00000260552.1"; ID "694965"; transcript_id "ENST00000568654.1"; exon "2"; exon_id "chr18.6348"; pos "last"	0	0	0	0
chr18	36191047	36191285	+	repeat_id "MSTA,chr18,36191047,36191285";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	36191122	36191203	exon	assembly	+	gene_id "ENSG00000075643.5"; ID "694977"; transcript_id "transcript18690.chr18.nnic"; exon "2"; exon_id "chr18.6357"; pos "mid"	0	0	0	0
chr18	39800102	39800435	-	repeat_id "MER61A,chr18,39800102,39800435";repeat_class "LTR";repeat_family "ERV1";	chr18	39800069	39800325	exon	assembly	-	gene_id "ENSG00000267374.1"; ID "695436"; transcript_id "transcript19503.chr18.nnic"; exon "1"; exon_id "chr18.6688"; pos "first"	22.539	16.7821	0	0
chr18	39800102	39800435	-	repeat_id "MER61A,chr18,39800102,39800435";repeat_class "LTR";repeat_family "ERV1";	chr18	39800069	39800325	exon	assembly	-	gene_id "ENSG00000267374.1"; ID "695469"; transcript_id "transcript19659.chr18.nnic"; exon "1"; exon_id "chr18.6688"; pos "first"	22.539	16.7821	0	0
chr18	39978963	39979856	+	repeat_id "MER63C,chr18,39978963,39979856";repeat_class "DNA";repeat_family "hAT-Blackjack";	chr18	39979192	39979319	exon	assembly	+	gene_id "novel_gene_chr18_20085"; ID "695729"; transcript_id "transcript20084.chr18.nnic"; exon "5"; exon_id "chr18.6808"; pos "last"	0	0	0	0
chr18	46126625	46126801	-	repeat_id "AluSz,chr18,46126625,46126801";repeat_class "SINE";repeat_family "Alu";	chr18	46126656	46126767	exon	assembly	+	gene_id "ENSG00000152240.12"; ID "696297"; transcript_id "ENST00000585425.1"; exon "1"; exon_id "chr18.7385"; pos "first"	0	0	0	0
chr18	62269341	62269849	-	repeat_id "Tigger4,chr18,62269341,62269849";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr18	62269411	62269512	exon	assembly	+	gene_id "ENSG00000134444.13"; ID "700227"; transcript_id "ENST00000256858.10"; exon "21"; exon_id "chr18.10577"; pos "mid"	0	21.3589	0	0
chr18	63381265	63381659	+	repeat_id "MLT1G1,chr18,63381265,63381659";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	63381377	63381629	exon	assembly	+	gene_id "ENSG00000267390.1"; ID "700673"; transcript_id "ENST00000589905.1"; exon "2"; exon_id "chr18.10839"; pos "last"	0	0	0	0
chr18	68716541	68716652	+	repeat_id "Charlie5,chr18,68716541,68716652";repeat_class "DNA";repeat_family "hAT-Charlie";	chr18	68716528	68716594	exon	assembly	+	gene_id "ENSG00000150636.17"; ID "701074"; transcript_id "ENST00000580292.2"; exon "2"; exon_id "chr18.11255"; pos "mid"	0	0	0	0
chr18	68822848	68823421	+	repeat_id "MER51E,chr18,68822848,68823421";repeat_class "LTR";repeat_family "ERV1";	chr18	68823374	68823416	exon	assembly	+	gene_id "ENSG00000150636.17"; ID "701091"; transcript_id "ENST00000577772.5"; exon "1"; exon_id "chr18.11271"; pos "first"	0	0	0	0
chr18	70314100	70314273	+	repeat_id "AluSx,chr18,70314100,70314273";repeat_class "SINE";repeat_family "Alu";	chr18	70314095	70314240	exon	assembly	+	gene_id "ENSG00000170677.5"; ID "701339"; transcript_id "transcript33653.chr18.nnic"; exon "2"; exon_id "chr18.11530"; pos "mid"	0	0	0	0
chr18	70314100	70314273	+	repeat_id "AluSx,chr18,70314100,70314273";repeat_class "SINE";repeat_family "Alu";	chr18	70314095	70314295	exon	assembly	+	gene_id "ENSG00000170677.5"; ID "701343"; transcript_id "transcript33657.chr18.nnic"; exon "2"; exon_id "chr18.11533"; pos "mid"	0	0	0	0
chr18	74497504	74497800	+	repeat_id "AluJb,chr18,74497504,74497800";repeat_class "SINE";repeat_family "Alu";	chr18	74497509	74497595	exon	assembly	+	gene_id "ENSG00000133313.14"; ID "701517"; transcript_id "transcript34234.chr18.nic"; exon "2"; exon_id "chr18.11812"; pos "mid"	0	12.7137	0	0
chr18	79970406	79970768	+	repeat_id "MLT1A,chr18,79970406,79970768";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	79970440	79970805	exon	assembly	+	gene_id "ENSG00000226742.3"; ID "702402"; transcript_id "transcript35636.chr18.nic"; exon "3"; exon_id "chr18.12730"; pos "last"	45.59	11.6966	0	0
chr18	79970406	79970768	+	repeat_id "MLT1A,chr18,79970406,79970768";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr18	79970440	79970822	exon	assembly	+	gene_id "ENSG00000226742.3"; ID "702398"; transcript_id "ENST00000451882.2"; exon "4"; exon_id "chr18.12727"; pos "last"	45.59	11.6966	0	0
chr18	80023991	80030683	+	repeat_id "PRIMA4-int,chr18,80023991,80030683";repeat_class "LTR";repeat_family "ERV1";	chr18	80030521	80030577	exon	assembly	-	gene_id "ENSG00000141759.14"; ID "702433"; transcript_id "ENST00000592957.1"; exon "2"; exon_id "chr18.12747"; pos "mid"	0	0	0	0
chr19	567308	567724	-	repeat_id "HERV3-int,chr19,567308,567724";repeat_class "LTR";repeat_family "ERV1";	chr19	567311	567624	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702820"; transcript_id "ENST00000590292.5"; exon "3"; exon_id "chr19.264"; pos "last"	16.9043	0	0	0
chr19	567308	567724	-	repeat_id "HERV3-int,chr19,567308,567724";repeat_class "LTR";repeat_family "ERV1";	chr19	567433	567624	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702824"; transcript_id "ENST00000588290.3"; exon "3"; exon_id "chr19.266"; pos "last"	16.9043	0	0	0
chr19	571377	571615	-	repeat_id "HERVIP10B3-int,chr19,571377,571615";repeat_class "LTR";repeat_family "ERV1";	chr19	571440	571596	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702819"; transcript_id "ENST00000590292.5"; exon "2"; exon_id "chr19.259"; pos "mid"	0	0	36.4686	0
chr19	571377	571615	-	repeat_id "HERVIP10B3-int,chr19,571377,571615";repeat_class "LTR";repeat_family "ERV1";	chr19	571440	571596	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702823"; transcript_id "ENST00000588290.3"; exon "2"; exon_id "chr19.259"; pos "mid"	0	0	36.4686	0
chr19	571641	571898	-	repeat_id "LTR10B2,chr19,571641,571898";repeat_class "LTR";repeat_family "ERV1";	chr19	571697	571734	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702818"; transcript_id "ENST00000590292.5"; exon "1"; exon_id "chr19.263"; pos "first"	0	0	0	0
chr19	572110	572238	-	repeat_id "AluJo,chr19,572110,572238";repeat_class "SINE";repeat_family "Alu";	chr19	572109	572228	exon	assembly	-	gene_id "ENSG00000267751.5"; ID "702822"; transcript_id "ENST00000588290.3"; exon "1"; exon_id "chr19.265"; pos "first"	0	0	0	0
chr19	1386500	1386794	-	repeat_id "AluSx1,chr19,1386500,1386794";repeat_class "SINE";repeat_family "Alu";	chr19	1386518	1386639	exon	assembly	+	gene_id "ENSG00000115286.19"; ID "703921"; transcript_id "ENST00000546172.7"; exon "2"; exon_id "chr19.1483"; pos "mid"	0	0	0	0
chr19	1601880	1602175	+	repeat_id "AluSx,chr19,1601880,1602175";repeat_class "SINE";repeat_family "Alu";	chr19	1602037	1602129	exon	assembly	-	gene_id "ENSG00000127540.11"; ID "704163"; transcript_id "ENST00000593264.5"; exon "1"; exon_id "chr19.1698"; pos "first"	0	0	0	0
chr19	2324682	2324960	+	repeat_id "L1MB7,chr19,2324682,2324960";repeat_class "LINE";repeat_family "L1";	chr19	2324742	2324906	exon	assembly	-	gene_id "ENSG00000130332.14"; ID "704926"; transcript_id "ENST00000589532.5"; exon "1"; exon_id "chr19.2627"; pos "first"	0	0	0	0
chr19	6078001	6078338	+	repeat_id "L1MB7,chr19,6078001,6078338";repeat_class "LINE";repeat_family "L1";	chr19	6078101	6078334	exon	assembly	-	gene_id "ENSG00000087903.12"; ID "708016"; transcript_id "ENST00000590822.1"; exon "2"; exon_id "chr19.5377"; pos "last"	16.9043	0	0	0
chr19	7893547	7893832	-	repeat_id "AluSg,chr19,7893547,7893832";repeat_class "SINE";repeat_family "Alu";	chr19	7893717	7893859	exon	assembly	+	gene_id "ENSG00000171017.10"; ID "709339"; transcript_id "ENST00000618098.4"; exon "2"; exon_id "chr19.6880"; pos "mid"	0	0	0	0
chr19	8418488	8418829	-	repeat_id "AluJr,chr19,8418488,8418829";repeat_class "SINE";repeat_family "Alu";	chr19	8418537	8418807	exon	assembly	+	gene_id "ENSG00000099785.10"; ID "709842"; transcript_id "transcript19006.chr19.nic"; exon "2"; exon_id "chr19.7332"; pos "mid"	35.8571	0	49.73	0
chr19	10379600	10379809	+	repeat_id "MIRb,chr19,10379600,10379809";repeat_class "SINE";repeat_family "MIR";	chr19	10379615	10379779	exon	assembly	-	gene_id "ENSG00000105397.13"; ID "711405"; transcript_id "ENST00000525621.5"; exon "2"; exon_id "chr19.8923"; pos "mid"	33.8082	48.3119	40.8891	0
chr19	10980750	10981034	-	repeat_id "AluJb,chr19,10980750,10981034";repeat_class "SINE";repeat_family "Alu";	chr19	10980777	10980852	exon	assembly	+	gene_id "ENSG00000127616.17"; ID "712415"; transcript_id "ENST00000429416.7"; exon "2"; exon_id "chr19.9648"; pos "mid"	0	0	0	28.5928
chr19	11033707	11034051	-	repeat_id "LFSINE_Vert,chr19,11033707,11034051";repeat_class "SINE";repeat_family "tRNA";	chr19	11033767	11033865	exon	assembly	+	gene_id "ENSG00000127616.17"; ID "712441"; transcript_id "ENST00000429416.7"; exon "28"; exon_id "chr19.9646"; pos "mid"	67.6167	0	72.9376	0
chr19	11146056	11146291	+	repeat_id "L2d,chr19,11146056,11146291";repeat_class "LINE";repeat_family "L2";	chr19	11146018	11146265	exon	assembly	-	gene_id "ENSG00000161888.11"; ID "712663"; transcript_id "transcript28425.chr19.nnic"; exon "2"; exon_id "chr19.9715"; pos "last"	9.22045	21.3591	23.2074	0
chr19	12954963	12955294	-	repeat_id "L1PA13,chr19,12954963,12955294";repeat_class "LINE";repeat_family "L1";	chr19	12955178	12955257	exon	assembly	-	gene_id "ENSG00000179271.2"; ID "714884"; transcript_id "transcript36235.chr19.nnic"; exon "2"; exon_id "chr19.11843"; pos "mid"	0	2.0342	4.42044	0
chr19	13768235	13768448	-	repeat_id "L2a,chr19,13768235,13768448";repeat_class "LINE";repeat_family "L2";	chr19	13768359	13768447	exon	assembly	+	gene_id "ENSG00000037757.13"; ID "715323"; transcript_id "ENST00000319545.12"; exon "3"; exon_id "chr19.12283"; pos "mid"	24.588	29.4956	0	0
chr19	13775291	13775574	-	repeat_id "AluJb,chr19,13775291,13775574";repeat_class "SINE";repeat_family "Alu";	chr19	13775307	13775406	exon	assembly	+	gene_id "ENSG00000104979.8"; ID "715345"; transcript_id "transcript37440.chr19.nnic"; exon "2"; exon_id "chr19.12297"; pos "mid"	0	0	44.2044	0
chr19	14491588	14491827	+	repeat_id "L2d2,chr19,14491588,14491827";repeat_class "LINE";repeat_family "L2";	chr19	14491656	14491743	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716157"; transcript_id "ENST00000393033.8"; exon "3"; exon_id "chr19.12985"; pos "mid"	574.74	192.739	224.338	106.484
chr19	14491588	14491827	+	repeat_id "L2d2,chr19,14491588,14491827";repeat_class "LINE";repeat_family "L2";	chr19	14491656	14491743	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716166"; transcript_id "transcript39387.chr19.nic"; exon "2"; exon_id "chr19.12985"; pos "mid"	574.74	192.739	224.338	106.484
chr19	14491588	14491827	+	repeat_id "L2d2,chr19,14491588,14491827";repeat_class "LINE";repeat_family "L2";	chr19	14491656	14491743	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716178"; transcript_id "transcript39490.chr19.nnic"; exon "2"; exon_id "chr19.12985"; pos "mid"	574.74	192.739	224.338	106.484
chr19	14491588	14491827	+	repeat_id "L2d2,chr19,14491588,14491827";repeat_class "LINE";repeat_family "L2";	chr19	14491705	14491743	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716182"; transcript_id "transcript39493.chr19.nnic"; exon "2"; exon_id "chr19.12997"; pos "mid"	574.74	192.739	224.338	106.484
chr19	14491588	14491827	+	repeat_id "L2d2,chr19,14491588,14491827";repeat_class "LINE";repeat_family "L2";	chr19	14491712	14491743	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716174"; transcript_id "transcript39487.chr19.nnic"; exon "2"; exon_id "chr19.12994"; pos "mid"	574.74	192.739	224.338	106.484
chr19	14492824	14492999	+	repeat_id "MIRb,chr19,14492824,14492999";repeat_class "SINE";repeat_family "MIR";	chr19	14492857	14492912	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716156"; transcript_id "ENST00000393033.8"; exon "2"; exon_id "chr19.12984"; pos "mid"	937.411	596.017	1474.22	681.301
chr19	14492824	14492999	+	repeat_id "MIRb,chr19,14492824,14492999";repeat_class "SINE";repeat_family "MIR";	chr19	14492857	14492915	exon	assembly	-	gene_id "ENSG00000123159.15"; ID "716165"; transcript_id "transcript39387.chr19.nic"; exon "1"; exon_id "chr19.12992"; pos "first"	937.411	596.017	1474.22	681.301
chr19	14544984	14545314	+	repeat_id "L2,chr19,14544984,14545314";repeat_class "LINE";repeat_family "L2";	chr19	14545114	14545180	exon	assembly	+	gene_id "ENSG00000099797.13"; ID "716271"; transcript_id "ENST00000598987.5"; exon "2"; exon_id "chr19.13091"; pos "mid"	0	0	0	0
chr19	15829202	15834725	+	repeat_id "HERVH-int,chr19,15829202,15834725";repeat_class "LTR";repeat_family "ERV1";	chr19	15831208	15831356	exon	assembly	+	gene_id "ENSG00000214049.6"; ID "716990"; transcript_id "transcript42164.chr19.nnic"; exon "2"; exon_id "chr19.13828"; pos "mid"	88.6185	0	153.611	0
chr19	15829202	15834725	+	repeat_id "HERVH-int,chr19,15829202,15834725";repeat_class "LTR";repeat_family "ERV1";	chr19	15831255	15831356	exon	assembly	+	gene_id "ENSG00000214049.6"; ID "716994"; transcript_id "ENST00000397381.4"; exon "2"; exon_id "chr19.13831"; pos "mid"	88.6185	0	153.611	0
chr19	15855098	15855406	+	repeat_id "AluSp,chr19,15855098,15855406";repeat_class "SINE";repeat_family "Alu";	chr19	15855254	15855372	exon	assembly	-	gene_id "ENSG00000267453.7"; ID "717002"; transcript_id "transcript42233.chr19.nnic"; exon "2"; exon_id "chr19.13960"; pos "mid"	0	0	0	0
chr19	16092843	16093154	-	repeat_id "AluJr,chr19,16092843,16093154";repeat_class "SINE";repeat_family "Alu";	chr19	16093107	16093132	exon	assembly	+	gene_id "ENSG00000167460.14"; ID "717096"; transcript_id "ENST00000591645.1"; exon "1"; exon_id "chr19.14043"; pos "first"	0	0	0	0
chr19	16209885	16210547	-	repeat_id "L1ME1,chr19,16209885,16210547";repeat_class "LINE";repeat_family "L1";	chr19	16210360	16210395	exon	assembly	+	gene_id "ENSG00000072958.8"; ID "717202"; transcript_id "ENST00000444449.6"; exon "6"; exon_id "chr19.14237"; pos "mid"	0	0	0	0
chr19	17075046	17075226	-	repeat_id "MIRb,chr19,17075046,17075226";repeat_class "SINE";repeat_family "MIR";	chr19	17075090	17075204	exon	assembly	-	gene_id "ENSG00000131351.14"; ID "717793"; transcript_id "transcript45982.chr19.nnic"; exon "1"; exon_id "chr19.14696"; pos "first"	0	0	0	0
chr19	17276798	17276897	-	repeat_id "OldhAT1,chr19,17276798,17276897";repeat_class "DNA";repeat_family "hAT-Ac";	chr19	17276814	17276909	exon	assembly	+	gene_id "ENSG00000105393.15"; ID "718154"; transcript_id "ENST00000601232.1"; exon "1"; exon_id "chr19.15051"; pos "first"	18.9533	22.8847	103.881	0
chr19	17276798	17276897	-	repeat_id "OldhAT1,chr19,17276798,17276897";repeat_class "DNA";repeat_family "hAT-Ac";	chr19	17276823	17276909	exon	assembly	+	gene_id "ENSG00000105393.15"; ID "718117"; transcript_id "ENST00000598188.5"; exon "8"; exon_id "chr19.15042"; pos "mid"	18.9533	22.8847	103.881	0
chr19	17276798	17276897	-	repeat_id "OldhAT1,chr19,17276798,17276897";repeat_class "DNA";repeat_family "hAT-Ac";	chr19	17276823	17276909	exon	assembly	+	gene_id "ENSG00000105393.15"; ID "718127"; transcript_id "ENST00000359435.8"; exon "8"; exon_id "chr19.15042"; pos "mid"	18.9533	22.8847	103.881	0
chr19	17276798	17276897	-	repeat_id "OldhAT1,chr19,17276798,17276897";repeat_class "DNA";repeat_family "hAT-Ac";	chr19	17276823	17276909	exon	assembly	+	gene_id "ENSG00000105393.15"; ID "718137"; transcript_id "ENST00000601043.5"; exon "8"; exon_id "chr19.15042"; pos "mid"	18.9533	22.8847	103.881	0
chr19	17277190	17277500	-	repeat_id "AluSx1,chr19,17277190,17277500";repeat_class "SINE";repeat_family "Alu";	chr19	17277384	17277479	exon	assembly	+	gene_id "ENSG00000105393.15"; ID "718155"; transcript_id "ENST00000601232.1"; exon "2"; exon_id "chr19.15052"; pos "mid"	0	0	0	0
chr19	17503464	17503649	-	repeat_id "AluJo,chr19,17503464,17503649";repeat_class "SINE";repeat_family "Alu";	chr19	17503436	17503622	exon	assembly	-	gene_id "ENSG00000269439.5"; ID "718443"; transcript_id "ENST00000595116.1"; exon "2"; exon_id "chr19.15429"; pos "last"	0	0	0	0
chr19	17934906	17935211	-	repeat_id "AluJr,chr19,17934906,17935211";repeat_class "SINE";repeat_family "Alu";	chr19	17935096	17935191	exon	assembly	+	gene_id "ENSG00000007080.10"; ID "718674"; transcript_id "ENST00000597436.5"; exon "1"; exon_id "chr19.15869"; pos "first"	36.8818	20.8505	0	0
chr19	18168411	18168659	-	repeat_id "L2b,chr19,18168411,18168659";repeat_class "LINE";repeat_family "L2";	chr19	18168475	18168546	exon	assembly	+	gene_id "ENSG00000105647.16"; ID "718802"; transcript_id "ENST00000222254.12"; exon "14"; exon_id "chr19.16046"; pos "mid"	0	16.7821	39.784	0
chr19	18572335	18572629	-	repeat_id "AluSx1,chr19,18572335,18572629";repeat_class "SINE";repeat_family "Alu";	chr19	18572351	18572607	exon	assembly	+	gene_id "ENSG00000221983.7"; ID "719299"; transcript_id "ENST00000596273.5"; exon "2"; exon_id "chr19.16507"; pos "mid"	0	69.1622	0	0
chr19	18572335	18572629	-	repeat_id "AluSx1,chr19,18572335,18572629";repeat_class "SINE";repeat_family "Alu";	chr19	18572351	18572607	exon	assembly	+	gene_id "ENSG00000221983.7"; ID "719306"; transcript_id "ENST00000595683.5"; exon "2"; exon_id "chr19.16507"; pos "mid"	0	69.1622	0	0
chr19	19771216	19771932	+	repeat_id "L1MDa,chr19,19771216,19771932";repeat_class "LINE";repeat_family "L1";	chr19	19771572	19771805	exon	assembly	-	gene_id "ENSG00000266904.5"; ID "720688"; transcript_id "ENST00000586816.1"; exon "2"; exon_id "chr19.17559"; pos "last"	0	0	0	0
chr19	19789660	19789957	-	repeat_id "AluSx,chr19,19789660,19789957";repeat_class "SINE";repeat_family "Alu";	chr19	19789680	19789821	exon	assembly	+	gene_id "ENSG00000267419.2"; ID "720708"; transcript_id "transcript54069.chr19.nnic"; exon "3"; exon_id "chr19.17565"; pos "mid"	0	0	0	0
chr19	23403511	23403964	+	repeat_id "LTR22A,chr19,23403511,23403964";repeat_class "LTR";repeat_family "ERVK";	chr19	23403720	23403747	exon	assembly	-	gene_id "ENSG00000269416.5"; ID "721777"; transcript_id "ENST00000596283.5"; exon "5"; exon_id "chr19.18705"; pos "mid"	0	0	0	47.3263
chr19	23550441	23553364	+	repeat_id "HERVH-int,chr19,23550441,23553364";repeat_class "LTR";repeat_family "ERV1";	chr19	23551715	23551809	exon	assembly	+	gene_id "novel_gene_chr19_58801"; ID "721828"; transcript_id "transcript58800.chr19.nnic"; exon "2"; exon_id "chr19.18839"; pos "mid"	0	0	0	0
chr19	24107036	24107724	-	repeat_id "L1M3a,chr19,24107036,24107724";repeat_class "LINE";repeat_family "L1";	chr19	24107216	24107349	exon	assembly	+	gene_id "ENSG00000213096.10"; ID "722106"; transcript_id "ENST00000339642.10"; exon "4"; exon_id "chr19.18982"; pos "last"	0	0	0	0
chr19	33395098	33395227	+	repeat_id "L2b,chr19,33395098,33395227";repeat_class "LINE";repeat_family "L2";	chr19	33395110	33395148	exon	assembly	-	gene_id "ENSG00000124299.13"; ID "723431"; transcript_id "ENST00000591968.1"; exon "1"; exon_id "chr19.20131"; pos "first"	0	0	0	0
chr19	35115841	35115949	+	repeat_id "L3,chr19,35115841,35115949";repeat_class "LINE";repeat_family "CR1";	chr19	35115879	35115959	exon	assembly	+	gene_id "ENSG00000089356.18"; ID "724183"; transcript_id "ENST00000604404.5"; exon "1"; exon_id "chr19.20758"; pos "first"	1513.18	0	658.647	0
chr19	36218123	36218357	+	repeat_id "MIR,chr19,36218123,36218357";repeat_class "SINE";repeat_family "MIR";	chr19	36218122	36218195	exon	assembly	+	gene_id "ENSG00000167635.11"; ID "725734"; transcript_id "ENST00000443387.2"; exon "2"; exon_id "chr19.22330"; pos "mid"	161.358	129.171	0	140.007
chr19	36327347	36330482	-	repeat_id "HERVS71-int,chr19,36327347,36330482";repeat_class "LTR";repeat_family "ERV1";	chr19	36330253	36330492	exon	assembly	-	gene_id "ENSG00000232677.6"; ID "725812"; transcript_id "transcript71595.chr19.nnic"; exon "2"; exon_id "chr19.22404"; pos "mid"	33.8085	17.2907	36.4686	0
chr19	36327347	36330482	-	repeat_id "HERVS71-int,chr19,36327347,36330482";repeat_class "LTR";repeat_family "ERV1";	chr19	36330253	36330492	exon	assembly	-	gene_id "ENSG00000232677.6"; ID "725841"; transcript_id "ENST00000591372.1"; exon "2"; exon_id "chr19.22404"; pos "mid"	33.8085	17.2907	36.4686	0
chr19	36551779	36552004	+	repeat_id "L2a,chr19,36551779,36552004";repeat_class "LINE";repeat_family "L2";	chr19	36551877	36551977	exon	assembly	-	gene_id "ENSG00000186020.12"; ID "726080"; transcript_id "ENST00000334116.7"; exon "5"; exon_id "chr19.22518"; pos "mid"	42.0043	75.2651	0	0
chr19	36574576	36574951	-	repeat_id "L1ME3,chr19,36574576,36574951";repeat_class "LINE";repeat_family "L1";	chr19	36574821	36574900	exon	assembly	+	gene_id "ENSG00000233527.8"; ID "726142"; transcript_id "transcript71140.chr19.nnic"; exon "2"; exon_id "chr19.22536"; pos "mid"	0	18.8163	0	0
chr19	36576946	36577259	-	repeat_id "AluJb,chr19,36576946,36577259";repeat_class "SINE";repeat_family "Alu";	chr19	36577141	36577237	exon	assembly	+	gene_id "ENSG00000233527.8"; ID "726143"; transcript_id "transcript71140.chr19.nnic"; exon "3"; exon_id "chr19.22541"; pos "mid"	18.441	0	0	0
chr19	36579403	36580580	-	repeat_id "Tigger3b,chr19,36579403,36580580";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr19	36580167	36580340	exon	assembly	+	gene_id "ENSG00000233527.8"; ID "726144"; transcript_id "transcript71140.chr19.nnic"; exon "4"; exon_id "chr19.22544"; pos "last"	0	0	0	0
chr19	36917564	36917687	-	repeat_id "L1MEd,chr19,36917564,36917687";repeat_class "LINE";repeat_family "L1";	chr19	36917579	36917648	exon	assembly	+	gene_id "ENSG00000198453.12"; ID "726610"; transcript_id "transcript71548.chr19.nic"; exon "2"; exon_id "chr19.22702"; pos "mid"	0	0	0	0
chr19	36917564	36917687	-	repeat_id "L1MEd,chr19,36917564,36917687";repeat_class "LINE";repeat_family "L1";	chr19	36917579	36917648	exon	assembly	+	gene_id "ENSG00000198453.12"; ID "726622"; transcript_id "ENST00000427117.5"; exon "2"; exon_id "chr19.22702"; pos "mid"	0	0	0	0
chr19	37224799	37225093	-	repeat_id "AluSg,chr19,37224799,37225093";repeat_class "SINE";repeat_family "Alu";	chr19	37224818	37224939	exon	assembly	+	gene_id "ENSG00000188283.11"; ID "726876"; transcript_id "transcript72460.chr19.nnic"; exon "3"; exon_id "chr19.23053"; pos "mid"	0	16.7821	0	0
chr19	39168212	39168339	-	repeat_id "MIRb,chr19,39168212,39168339";repeat_class "SINE";repeat_family "MIR";	chr19	39168230	39168302	exon	assembly	+	gene_id "ENSG00000130669.17"; ID "729100"; transcript_id "transcript78537.chr19.nic"; exon "2"; exon_id "chr19.24912"; pos "mid"	29.7102	0	0	0
chr19	39454869	39455279	+	repeat_id "L1ME4b,chr19,39454869,39455279";repeat_class "LINE";repeat_family "L1";	chr19	39455131	39455171	exon	assembly	-	gene_id "ENSG00000105193.8"; ID "729362"; transcript_id "transcript78925.chr19.nnic"; exon "1"; exon_id "chr19.25165"; pos "first"	0	0	0	0
chr19	45689033	45689381	+	repeat_id "L2,chr19,45689033,45689381";repeat_class "LINE";repeat_family "L2";	chr19	45689233	45689347	exon	assembly	-	gene_id "ENSG00000125743.10"; ID "735077"; transcript_id "ENST00000391932.7"; exon "2"; exon_id "chr19.30239"; pos "mid"	0	0	0	0
chr19	45690550	45690861	+	repeat_id "AluSx1,chr19,45690550,45690861";repeat_class "SINE";repeat_family "Alu";	chr19	45690572	45690667	exon	assembly	-	gene_id "ENSG00000125743.10"; ID "735086"; transcript_id "ENST00000587367.5"; exon "2"; exon_id "chr19.30245"; pos "mid"	0	0	0	0
chr19	45996097	45996427	+	repeat_id "L2a,chr19,45996097,45996427";repeat_class "LINE";repeat_family "L2";	chr19	45996245	45996342	exon	assembly	+	gene_id "ENSG00000104983.8"; ID "735409"; transcript_id "transcript94616.chr19.nic"; exon "2"; exon_id "chr19.30661"; pos "last"	0	0	0	0
chr19	46119705	46120345	-	repeat_id "LTR1E,chr19,46119705,46120345";repeat_class "LTR";repeat_family "ERV1";	chr19	46120071	46120357	exon	assembly	-	gene_id "ENSG00000188624.2"; ID "735468"; transcript_id "transcript94717.chr19.nnic"; exon "4"; exon_id "chr19.30740"; pos "last"	0	0	1.10511	0
chr19	46119705	46120345	-	repeat_id "LTR1E,chr19,46119705,46120345";repeat_class "LTR";repeat_family "ERV1";	chr19	46120071	46120357	exon	assembly	-	gene_id "ENSG00000188624.2"; ID "735473"; transcript_id "ENST00000341415.2"; exon "4"; exon_id "chr19.30740"; pos "last"	0	0	1.10511	0
chr19	47476025	47476337	+	repeat_id "AluSz6,chr19,47476025,47476337";repeat_class "SINE";repeat_family "Alu";	chr19	47476115	47476187	exon	assembly	-	gene_id "ENSG00000118162.13"; ID "736757"; transcript_id "ENST00000600551.1"; exon "1"; exon_id "chr19.31747"; pos "first"	0	0	0	0
chr19	48277198	48277367	+	repeat_id "AluSx,chr19,48277198,48277367";repeat_class "SINE";repeat_family "Alu";	chr19	48277203	48277377	exon	assembly	+	gene_id "ENSG00000178150.9"; ID "737395"; transcript_id "transcript100306.chr19.nnic"; exon "4"; exon_id "chr19.32225"; pos "last"	0	0	0	0
chr19	49676362	49676513	-	repeat_id "L2b,chr19,49676362,49676513";repeat_class "LINE";repeat_family "L2";	chr19	49676346	49676439	exon	assembly	+	gene_id "ENSG00000126457.21"; ID "739372"; transcript_id "ENST00000532489.5"; exon "2"; exon_id "chr19.34176"; pos "mid"	0	0	0	0
chr19	50020562	50020684	-	repeat_id "MamRep605b,chr19,50020562,50020684";repeat_class "LTR?";repeat_family "LTR?";	chr19	50020585	50020647	exon	assembly	-	gene_id "ENSG00000105053.10"; ID "740119"; transcript_id "transcript108955.chr19.nic"; exon "2"; exon_id "chr19.34800"; pos "mid"	44.5653	24.9189	14.3664	0
chr19	50020562	50020684	-	repeat_id "MamRep605b,chr19,50020562,50020684";repeat_class "LTR?";repeat_family "LTR?";	chr19	50020585	50020647	exon	assembly	-	gene_id "ENSG00000105053.10"; ID "740148"; transcript_id "ENST00000316763.7"; exon "2"; exon_id "chr19.34800"; pos "mid"	44.5653	24.9189	14.3664	0
chr19	50020562	50020684	-	repeat_id "MamRep605b,chr19,50020562,50020684";repeat_class "LTR?";repeat_family "LTR?";	chr19	50020585	50020647	exon	assembly	-	gene_id "ENSG00000105053.10"; ID "740206"; transcript_id "ENST00000594092.5"; exon "2"; exon_id "chr19.34800"; pos "mid"	44.5653	24.9189	14.3664	0
chr19	51855409	51856168	-	repeat_id "L1M4,chr19,51855409,51856168";repeat_class "LINE";repeat_family "L1";	chr19	51855810	51855967	exon	assembly	-	gene_id "ENSG00000161551.14"; ID "741133"; transcript_id "ENST00000640955.1"; exon "7"; exon_id "chr19.36315"; pos "last"	0	0	0	0
chr19	52031094	52031707	+	repeat_id "L1MD2,chr19,52031094,52031707";repeat_class "LINE";repeat_family "L1";	chr19	52031391	52031751	exon	assembly	-	gene_id "ENSG00000256087.6"; ID "741366"; transcript_id "transcript111367.chr19.nnic"; exon "6"; exon_id "chr19.36419"; pos "last"	0	0	0	0
chr19	52169655	52169811	+	repeat_id "AluJb,chr19,52169655,52169811";repeat_class "SINE";repeat_family "Alu";	chr19	52169648	52169781	exon	assembly	-	gene_id "ENSG00000196267.12"; ID "741498"; transcript_id "transcript112408.chr19.nic"; exon "2"; exon_id "chr19.36607"; pos "mid"	9.22041	0	0	0
chr19	52169655	52169811	+	repeat_id "AluJb,chr19,52169655,52169811";repeat_class "SINE";repeat_family "Alu";	chr19	52169648	52169781	exon	assembly	-	gene_id "ENSG00000196267.12"; ID "741509"; transcript_id "ENST00000597065.1"; exon "2"; exon_id "chr19.36607"; pos "mid"	9.22041	0	0	0
chr19	52804987	52805297	+	repeat_id "AluSc8,chr19,52804987,52805297";repeat_class "SINE";repeat_family "Alu";	chr19	52805145	52805262	exon	assembly	-	gene_id "ENSG00000198538.10"; ID "742060"; transcript_id "transcript113128.chr19.nic"; exon "4"; exon_id "chr19.36895"; pos "mid"	0	0	0	0
chr19	52814309	52814605	+	repeat_id "AluSx,chr19,52814309,52814605";repeat_class "SINE";repeat_family "Alu";	chr19	52814284	52814426	exon	assembly	-	gene_id "ENSG00000198538.10"; ID "742069"; transcript_id "transcript114163.chr19.nic"; exon "3"; exon_id "chr19.36899"; pos "last"	0	6.1026	0	0
chr19	52814309	52814605	+	repeat_id "AluSx,chr19,52814309,52814605";repeat_class "SINE";repeat_family "Alu";	chr19	52814284	52814426	exon	assembly	-	gene_id "ENSG00000198538.10"; ID "742073"; transcript_id "transcript114165.chr19.nic"; exon "3"; exon_id "chr19.36899"; pos "last"	0	6.1026	0	0
chr19	52814309	52814605	+	repeat_id "AluSx,chr19,52814309,52814605";repeat_class "SINE";repeat_family "Alu";	chr19	52814284	52814426	exon	assembly	-	gene_id "ENSG00000198538.10"; ID "742098"; transcript_id "ENST00000542421.1"; exon "2"; exon_id "chr19.36899"; pos "last"	0	6.1026	0	0
chr19	52845027	52845329	+	repeat_id "AluSc8,chr19,52845027,52845329";repeat_class "SINE";repeat_family "Alu";	chr19	52845179	52845296	exon	assembly	-	gene_id "ENSG00000204604.9"; ID "742129"; transcript_id "ENST00000243639.8"; exon "4"; exon_id "chr19.36913"; pos "mid"	0	0	0	0
chr19	52985735	52988042	-	repeat_id "HERVK3-int,chr19,52985735,52988042";repeat_class "LTR";repeat_family "ERVK";	chr19	52986575	52986846	exon	assembly	-	gene_id "ENSG00000242779.6"; ID "742314"; transcript_id "ENST00000270443.8"; exon "2"; exon_id "chr19.36989"; pos "mid"	0	50.8546	0	0
chr19	53444968	53445144	-	repeat_id "AluSp,chr19,53444968,53445144";repeat_class "SINE";repeat_family "Alu";	chr19	53445001	53445123	exon	assembly	+	gene_id "ENSG00000160336.14"; ID "742690"; transcript_id "ENST00000610928.4"; exon "2"; exon_id "chr19.37563"; pos "mid"	0	0	49.7301	0
chr19	53444968	53445144	-	repeat_id "AluSp,chr19,53444968,53445144";repeat_class "SINE";repeat_family "Alu";	chr19	53445001	53445123	exon	assembly	+	gene_id "ENSG00000160336.14"; ID "742696"; transcript_id "ENST00000432094.6"; exon "1"; exon_id "chr19.37563"; pos "first"	0	0	49.7301	0
chr19	53446201	53446369	-	repeat_id "AluSz,chr19,53446201,53446369";repeat_class "SINE";repeat_family "Alu";	chr19	53446227	53446337	exon	assembly	+	gene_id "ENSG00000160336.14"; ID "742691"; transcript_id "ENST00000610928.4"; exon "3"; exon_id "chr19.37553"; pos "mid"	0	16.7821	36.4686	0
chr19	53446201	53446369	-	repeat_id "AluSz,chr19,53446201,53446369";repeat_class "SINE";repeat_family "Alu";	chr19	53446227	53446337	exon	assembly	+	gene_id "ENSG00000160336.14"; ID "742697"; transcript_id "ENST00000432094.6"; exon "2"; exon_id "chr19.37553"; pos "mid"	0	16.7821	36.4686	0
chr19	54106194	54106468	-	repeat_id "AluY,chr19,54106194,54106468";repeat_class "SINE";repeat_family "Alu";	chr19	54106353	54106446	exon	assembly	+	gene_id "ENSG00000170906.15"; ID "742895"; transcript_id "ENST00000391762.5"; exon "4"; exon_id "chr19.37897"; pos "mid"	0	0	0	0
chr19	54106194	54106468	-	repeat_id "AluY,chr19,54106194,54106468";repeat_class "SINE";repeat_family "Alu";	chr19	54106353	54106446	exon	assembly	+	gene_id "ENSG00000170906.15"; ID "742938"; transcript_id "ENST00000422029.6"; exon "3"; exon_id "chr19.37897"; pos "mid"	0	0	0	0
chr19	54106194	54106468	-	repeat_id "AluY,chr19,54106194,54106468";repeat_class "SINE";repeat_family "Alu";	chr19	54106353	54106446	exon	assembly	+	gene_id "ENSG00000170906.15"; ID "742943"; transcript_id "ENST00000420296.1"; exon "2"; exon_id "chr19.37897"; pos "mid"	0	0	0	0
chr19	55038887	55039250	+	repeat_id "L1MB4,chr19,55038887,55039250";repeat_class "LINE";repeat_family "L1";	chr19	55039108	55039264	exon	assembly	-	gene_id "ENSG00000160439.15"; ID "743420"; transcript_id "ENST00000592423.1"; exon "2"; exon_id "chr19.38832"; pos "last"	0	0	0	0
chr19	55660170	55660265	-	repeat_id "X12_DNA,chr19,55660170,55660265";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr19	55660177	55660221	exon	assembly	+	gene_id "ENSG00000063244.12"; ID "744024"; transcript_id "ENST00000450554.6"; exon "3"; exon_id "chr19.39792"; pos "mid"	109.621	39.6668	122.668	146.909
chr19	56313202	56313542	-	repeat_id "THE1B,chr19,56313202,56313542";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr19	56313283	56313384	exon	assembly	-	gene_id "ENSG00000131848.9"; ID "744209"; transcript_id "transcript120104.chr19.nic"; exon "2"; exon_id "chr19.40045"; pos "mid"	0	0	0	0
chr19	56313202	56313542	-	repeat_id "THE1B,chr19,56313202,56313542";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr19	56313283	56313384	exon	assembly	-	gene_id "ENSG00000131848.9"; ID "744230"; transcript_id "transcript120109.chr19.nic"; exon "2"; exon_id "chr19.40045"; pos "mid"	0	0	0	0
chr19	56397967	56398590	-	repeat_id "LTR9D,chr19,56397967,56398590";repeat_class "LTR";repeat_family "ERV1";	chr19	56398277	56398383	exon	assembly	+	gene_id "ENSG00000267454.5"; ID "744406"; transcript_id "transcript120389.chr19.nic"; exon "4"; exon_id "chr19.40206"; pos "mid"	0	0	0	0
chr19	56398731	56399240	+	repeat_id "MER83,chr19,56398731,56399240";repeat_class "LTR";repeat_family "ERV1";	chr19	56398894	56399168	exon	assembly	+	gene_id "ENSG00000267454.5"; ID "744407"; transcript_id "transcript120389.chr19.nic"; exon "5"; exon_id "chr19.40207"; pos "last"	0	0	0	0
chr19	57438094	57438586	+	repeat_id "LTR3B_,chr19,57438094,57438586";repeat_class "LTR";repeat_family "ERVK";	chr19	57438102	57438457	exon	assembly	+	gene_id "ENSG00000186230.6"; ID "744869"; transcript_id "ENST00000597296.1"; exon "2"; exon_id "chr19.40719"; pos "last"	0	18.8163	40.8891	19.7193
chr19	57850212	57850590	-	repeat_id "LTR8,chr19,57850212,57850590";repeat_class "LTR";repeat_family "ERV1";	chr19	57850315	57850561	exon	assembly	-	gene_id "ENSG00000204514.9"; ID "745415"; transcript_id "transcript122221.chr19.nnic"; exon "4"; exon_id "chr19.41010"; pos "last"	0	18.8163	0	0
chr19	57850212	57850590	-	repeat_id "LTR8,chr19,57850212,57850590";repeat_class "LTR";repeat_family "ERV1";	chr19	57850320	57850561	exon	assembly	-	gene_id "ENSG00000269476.1"; ID "745450"; transcript_id "transcript122777.chr19.nnic"; exon "3"; exon_id "chr19.41025"; pos "last"	0	18.8163	0	0
chr19	58142970	58143234	+	repeat_id "AluJb,chr19,58142970,58143234";repeat_class "SINE";repeat_family "Alu";	chr19	58143105	58143198	exon	assembly	-	gene_id "ENSG00000181894.14"; ID "745607"; transcript_id "ENST00000598312.5"; exon "2"; exon_id "chr19.41325"; pos "mid"	0	0	0	21.6911
chr19	58142970	58143234	+	repeat_id "AluJb,chr19,58142970,58143234";repeat_class "SINE";repeat_family "Alu";	chr19	58143105	58143198	exon	assembly	-	gene_id "ENSG00000181894.14"; ID "745612"; transcript_id "ENST00000500161.2"; exon "2"; exon_id "chr19.41325"; pos "mid"	0	0	0	21.6911
chr19	58230272	58230516	-	repeat_id "MIR,chr19,58230272,58230516";repeat_class "SINE";repeat_family "MIR";	chr19	58230394	58230462	exon	assembly	+	gene_id "ENSG00000198131.13"; ID "745738"; transcript_id "transcript123671.chr19.nic"; exon "3"; exon_id "chr19.41371"; pos "mid"	114.231	17.2907	81.7785	73.947
chr19	58230272	58230516	-	repeat_id "MIR,chr19,58230272,58230516";repeat_class "SINE";repeat_family "MIR";	chr19	58230394	58230462	exon	assembly	+	gene_id "ENSG00000198131.13"; ID "745746"; transcript_id "ENST00000599227.5"; exon "3"; exon_id "chr19.41371"; pos "mid"	114.231	17.2907	81.7785	73.947
chr19	58230272	58230516	-	repeat_id "MIR,chr19,58230272,58230516";repeat_class "SINE";repeat_family "MIR";	chr19	58230394	58230462	exon	assembly	+	gene_id "ENSG00000198131.13"; ID "745753"; transcript_id "ENST00000599714.1"; exon "2"; exon_id "chr19.41371"; pos "mid"	114.231	17.2907	81.7785	73.947
chr19	58230272	58230516	-	repeat_id "MIR,chr19,58230272,58230516";repeat_class "SINE";repeat_family "MIR";	chr19	58230394	58230462	exon	assembly	+	gene_id "ENSG00000198131.13"; ID "745757"; transcript_id "ENST00000595981.5"; exon "2"; exon_id "chr19.41371"; pos "mid"	114.231	17.2907	81.7785	73.947
chr19	58230272	58230516	-	repeat_id "MIR,chr19,58230272,58230516";repeat_class "SINE";repeat_family "MIR";	chr19	58230394	58230462	exon	assembly	+	gene_id "ENSG00000198131.13"; ID "745782"; transcript_id "ENST00000596825.5"; exon "3"; exon_id "chr19.41371"; pos "mid"	114.231	17.2907	81.7785	73.947
chr19	58259403	58259756	-	repeat_id "MLT1D,chr19,58259403,58259756";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr19	58259448	58259691	exon	assembly	-	gene_id "ENSG00000268516.2"; ID "745816"; transcript_id "transcript124136.chr19.nnic"; exon "3"; exon_id "chr19.41395"; pos "last"	0	0	0	35.4946
chr19	58311249	58313278	+	repeat_id "HERVK3-int,chr19,58311249,58313278";repeat_class "LTR";repeat_family "ERVK";	chr19	58312166	58312462	exon	assembly	+	gene_id "ENSG00000142396.10"; ID "745843"; transcript_id "ENST00000413518.5"; exon "3"; exon_id "chr19.41410"; pos "mid"	213.607	130.697	153.611	254.379
chr19	58311249	58313278	+	repeat_id "HERVK3-int,chr19,58311249,58313278";repeat_class "LTR";repeat_family "ERVK";	chr19	58312166	58312462	exon	assembly	+	gene_id "ENSG00000267216.1"; ID "745837"; transcript_id "ENST00000591325.1"; exon "6"; exon_id "chr19.41410"; pos "mid"	213.607	130.697	153.611	254.379
chr19	58311249	58313278	+	repeat_id "HERVK3-int,chr19,58311249,58313278";repeat_class "LTR";repeat_family "ERVK";	chr19	58312197	58312462	exon	assembly	+	gene_id "ENSG00000142396.10"; ID "745848"; transcript_id "ENST00000427361.5"; exon "3"; exon_id "chr19.41415"; pos "mid"	213.607	130.697	153.611	254.379
chr19	58325249	58325373	+	repeat_id "L2a,chr19,58325249,58325373";repeat_class "LINE";repeat_family "L2";	chr19	58325275	58325361	exon	assembly	-	gene_id "ENSG00000283103.1"; ID "745856"; transcript_id "transcript123969.chr19.nnic"; exon "2"; exon_id "chr19.41420"; pos "mid"	0	86.9615	0	0
chr2	3274225	3275516	+	repeat_id "L1MEd,chr2,3274225,3275516";repeat_class "LINE";repeat_family "L1";	chr2	3274339	3274419	exon	assembly	-	gene_id "ENSG00000032389.12"; ID "80033"; transcript_id "ENST00000398659.8"; exon "4"; exon_id "chr2.499"; pos "mid"	0	0	0	0
chr2	8974114	8974547	+	repeat_id "MLT1L,chr2,8974114,8974547";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	8974359	8974435	exon	assembly	-	gene_id "ENSG00000143797.11"; ID "80509"; transcript_id "transcript2157.chr2.nnic"; exon "2"; exon_id "chr2.1227"; pos "mid"	0	0	0	0
chr2	10387769	10387879	+	repeat_id "MIR3,chr2,10387769,10387879";repeat_class "SINE";repeat_family "MIR";	chr2	10387761	10387810	exon	assembly	+	gene_id "ENSG00000115756.12"; ID "81350"; transcript_id "transcript5865.chr2.nnic"; exon "2"; exon_id "chr2.1755"; pos "mid"	0	0	0	0
chr2	23968882	23969189	-	repeat_id "AluSc,chr2,23968882,23969189";repeat_class "SINE";repeat_family "Alu";	chr2	23968919	23969035	exon	assembly	+	gene_id "ENSG00000173960.13"; ID "83663"; transcript_id "ENST00000446425.2"; exon "3"; exon_id "chr2.3501"; pos "mid"	0	0	0	0
chr2	27350220	27350401	+	repeat_id "MER5A,chr2,27350220,27350401";repeat_class "DNA";repeat_family "hAT-Charlie";	chr2	27350314	27350389	exon	assembly	-	gene_id "ENSG00000115207.13"; ID "85997"; transcript_id "transcript18532.chr2.nnic"; exon "2"; exon_id "chr2.5340"; pos "mid"	108.084	8.1368	171.293	34.5086
chr2	27869516	27872197	-	repeat_id "Charlie3,chr2,27869516,27872197";repeat_class "DNA";repeat_family "hAT-Charlie";	chr2	27869772	27870890	exon	assembly	-	gene_id "ENSG00000171174.13"; ID "86622"; transcript_id "ENST00000449378.1"; exon "2"; exon_id "chr2.5880"; pos "mid"	0	0	0	0
chr2	27942353	27942667	-	repeat_id "AluJb,chr2,27942353,27942667";repeat_class "SINE";repeat_family "Alu";	chr2	27942386	27942494	exon	assembly	+	gene_id "ENSG00000158019.20"; ID "86635"; transcript_id "transcript21240.chr2.nnic"; exon "4"; exon_id "chr2.5883"; pos "mid"	0	0	0	0
chr2	32011776	32012079	+	repeat_id "AluJr4,chr2,32011776,32012079";repeat_class "SINE";repeat_family "Alu";	chr2	32011886	32012052	exon	assembly	-	gene_id "ENSG00000162961.13"; ID "87662"; transcript_id "ENST00000452582.5"; exon "7"; exon_id "chr2.6709"; pos "last"	0	0	0	0
chr2	32023389	32023593	+	repeat_id "MIRb,chr2,32023389,32023593";repeat_class "SINE";repeat_family "MIR";	chr2	32023422	32023474	exon	assembly	-	gene_id "ENSG00000162961.13"; ID "87661"; transcript_id "ENST00000452582.5"; exon "6"; exon_id "chr2.6702"; pos "mid"	0	18.3078	0	37.4665
chr2	37317798	37317887	-	repeat_id "5S,chr2,37317798,37317887";repeat_class "rRNA";repeat_family "rRNA";	chr2	37317787	37317894	exon	assembly	-	gene_id "ENSG00000115825.9"; ID "89189"; transcript_id "ENST00000379066.5"; exon "1"; exon_id "chr2.7767"; pos "first"	17.4165	0	0	0
chr2	38779237	38779529	-	repeat_id "AluSz,chr2,38779237,38779529";repeat_class "SINE";repeat_family "Alu";	chr2	38779258	38779441	exon	assembly	+	gene_id "ENSG00000152147.10"; ID "89797"; transcript_id "ENST00000409566.1"; exon "3"; exon_id "chr2.8322"; pos "mid"	57.3716	28.4788	0	0
chr2	39443433	39443725	-	repeat_id "AluJb,chr2,39443433,39443725";repeat_class "SINE";repeat_family "Alu";	chr2	39443611	39443748	exon	assembly	+	gene_id "ENSG00000231312.6"; ID "90415"; transcript_id "transcript32055.chr2.nnic"; exon "2"; exon_id "chr2.8655"; pos "mid"	0	0	0	0
chr2	39453627	39453953	-	repeat_id "AluJo,chr2,39453627,39453953";repeat_class "SINE";repeat_family "Alu";	chr2	39453839	39453931	exon	assembly	+	gene_id "ENSG00000231312.6"; ID "90416"; transcript_id "transcript32055.chr2.nnic"; exon "3"; exon_id "chr2.8650"; pos "mid"	46.102	34.0727	0	0
chr2	39454205	39454414	-	repeat_id "X12_DNA,chr2,39454205,39454414";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr2	39454297	39454365	exon	assembly	+	gene_id "ENSG00000231312.6"; ID "90417"; transcript_id "transcript32055.chr2.nnic"; exon "4"; exon_id "chr2.8651"; pos "mid"	27.6613	0	0	32.5367
chr2	39756963	39757366	-	repeat_id "L2,chr2,39756963,39757366";repeat_class "LINE";repeat_family "L2";	chr2	39757248	39757368	exon	assembly	-	gene_id "ENSG00000138050.14"; ID "90458"; transcript_id "ENST00000378727.8"; exon "7"; exon_id "chr2.8748"; pos "mid"	17.4165	0	0	0
chr2	40514322	40514501	+	repeat_id "MLT1L,chr2,40514322,40514501";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	40514312	40514390	exon	assembly	+	gene_id "novel_gene_chr2_32820"; ID "90692"; transcript_id "transcript32819.chr2.nnic"; exon "3"; exon_id "chr2.8952"; pos "mid"	0	0	0	0
chr2	40545338	40545790	+	repeat_id "LTR33,chr2,40545338,40545790";repeat_class "LTR";repeat_family "ERVL";	chr2	40545360	40545778	exon	assembly	+	gene_id "novel_gene_chr2_32820"; ID "90696"; transcript_id "transcript32819.chr2.nnic"; exon "7"; exon_id "chr2.8955"; pos "last"	0	0	0	0
chr2	42335564	42335723	-	repeat_id "MIR,chr2,42335564,42335723";repeat_class "SINE";repeat_family "MIR";	chr2	42335559	42335745	exon	assembly	-	gene_id "ENSG00000115944.14"; ID "90930"; transcript_id "transcript33340.chr2.nnic"; exon "3"; exon_id "chr2.9091"; pos "last"	0	0	0	0
chr2	43033147	43033606	+	repeat_id "MLT1D,chr2,43033147,43033606";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	43033230	43033526	exon	assembly	-	gene_id "ENSG00000231826.5"; ID "91111"; transcript_id "transcript34000.chr2.nnic"; exon "3"; exon_id "chr2.9226"; pos "mid"	16.9043	0	120.457	0
chr2	43033147	43033606	+	repeat_id "MLT1D,chr2,43033147,43033606";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	43033230	43033526	exon	assembly	-	gene_id "ENSG00000231826.5"; ID "91117"; transcript_id "transcript34033.chr2.nnic"; exon "3"; exon_id "chr2.9226"; pos "mid"	16.9043	0	120.457	0
chr2	46587931	46588159	+	repeat_id "MIRb,chr2,46587931,46588159";repeat_class "SINE";repeat_family "MIR";	chr2	46588075	46588126	exon	assembly	-	gene_id "ENSG00000151665.12"; ID "92860"; transcript_id "transcript36679.chr2.nnic"; exon "6"; exon_id "chr2.10250"; pos "mid"	0	0	0	19.7192
chr2	46587931	46588159	+	repeat_id "MIRb,chr2,46587931,46588159";repeat_class "SINE";repeat_family "MIR";	chr2	46588075	46588179	exon	assembly	-	gene_id "ENSG00000151665.12"; ID "92868"; transcript_id "ENST00000306465.8"; exon "6"; exon_id "chr2.10253"; pos "mid"	0	0	0	19.7192
chr2	47172269	47172455	+	repeat_id "MIRb,chr2,47172269,47172455";repeat_class "SINE";repeat_family "MIR";	chr2	47172414	47172459	exon	assembly	-	gene_id "ENSG00000143933.16"; ID "93219"; transcript_id "ENST00000456319.5"; exon "2"; exon_id "chr2.10512"; pos "mid"	59.9329	82.8933	0	0
chr2	47172269	47172455	+	repeat_id "MIRb,chr2,47172269,47172455";repeat_class "SINE";repeat_family "MIR";	chr2	47172414	47172459	exon	assembly	-	gene_id "ENSG00000143933.16"; ID "93227"; transcript_id "ENST00000489742.1"; exon "2"; exon_id "chr2.10512"; pos "mid"	59.9329	82.8933	0	0
chr2	47335315	47335514	+	repeat_id "BC200,chr2,47335315,47335514";repeat_class "scRNA";repeat_family "scRNA";	chr2	47335315	47335514	exon	assembly	+	gene_id "ENSG00000236824.2"; ID "93264"; transcript_id "ENST00000418539.2"; exon "1"; exon_id "chr2.10529";	0	0	0	0
chr2	55267507	55267721	+	repeat_id "MIRc,chr2,55267507,55267721";repeat_class "SINE";repeat_family "MIR";	chr2	55267569	55267635	exon	assembly	-	gene_id "ENSG00000085760.14"; ID "94701"; transcript_id "ENST00000263629.8"; exon "3"; exon_id "chr2.11752"; pos "mid"	126.013	86.453	88.4091	106.484
chr2	55267507	55267721	+	repeat_id "MIRc,chr2,55267507,55267721";repeat_class "SINE";repeat_family "MIR";	chr2	55267569	55267635	exon	assembly	-	gene_id "ENSG00000085760.14"; ID "94717"; transcript_id "ENST00000403721.5"; exon "2"; exon_id "chr2.11752"; pos "mid"	126.013	86.453	88.4091	106.484
chr2	55268545	55268728	-	repeat_id "MIR3,chr2,55268545,55268728";repeat_class "SINE";repeat_family "MIR";	chr2	55268578	55268739	exon	assembly	-	gene_id "ENSG00000085760.14"; ID "94700"; transcript_id "ENST00000263629.8"; exon "2"; exon_id "chr2.11751"; pos "mid"	104.499	55.9403	12.1562	0
chr2	55577854	55578446	+	repeat_id "L1ME3Cz,chr2,55577854,55578446";repeat_class "LINE";repeat_family "L1";	chr2	55578247	55578342	exon	assembly	-	gene_id "ENSG00000275052.4"; ID "94919"; transcript_id "ENST00000616407.1"; exon "10"; exon_id "chr2.11967"; pos "mid"	16.9043	0	98.355	0
chr2	55615581	55615882	+	repeat_id "AluSc,chr2,55615581,55615882";repeat_class "SINE";repeat_family "Alu";	chr2	55615600	55615879	exon	assembly	-	gene_id "ENSG00000275052.4"; ID "94893"; transcript_id "transcript44724.chr2.nnic"; exon "1"; exon_id "chr2.11958"; pos "first"	0	0	0	0
chr2	58154713	58155216	-	repeat_id "L1MD2,chr2,58154713,58155216";repeat_class "LINE";repeat_family "L1";	chr2	58154754	58154802	exon	assembly	+	gene_id "ENSG00000028116.16"; ID "95192"; transcript_id "transcript45249.chr2.nic"; exon "13"; exon_id "chr2.12156"; pos "mid"	0	0	0	0
chr2	61068759	61068973	-	repeat_id "MIR,chr2,61068759,61068973";repeat_class "SINE";repeat_family "MIR";	chr2	61068849	61068985	exon	assembly	+	gene_id "ENSG00000162929.13"; ID "95691"; transcript_id "ENST00000453186.5"; exon "2"; exon_id "chr2.12513"; pos "mid"	34.3207	52.8889	0	0
chr2	61068759	61068973	-	repeat_id "MIR,chr2,61068759,61068973";repeat_class "SINE";repeat_family "MIR";	chr2	61068849	61068985	exon	assembly	+	gene_id "ENSG00000162929.13"; ID "95725"; transcript_id "ENST00000402291.5"; exon "2"; exon_id "chr2.12513"; pos "mid"	34.3207	52.8889	0	0
chr2	61159296	61159595	-	repeat_id "AluSz,chr2,61159296,61159595";repeat_class "SINE";repeat_family "Alu";	chr2	61159318	61159439	exon	assembly	+	gene_id "ENSG00000237651.6"; ID "95779"; transcript_id "transcript47045.chr2.nnic"; exon "2"; exon_id "chr2.12558"; pos "mid"	0	0	0	0
chr2	61159296	61159595	-	repeat_id "AluSz,chr2,61159296,61159595";repeat_class "SINE";repeat_family "Alu";	chr2	61159318	61159439	exon	assembly	+	gene_id "ENSG00000237651.6"; ID "95795"; transcript_id "ENST00000398622.3"; exon "3"; exon_id "chr2.12558"; pos "mid"	0	0	0	0
chr2	61482598	61482921	-	repeat_id "AluSx3,chr2,61482598,61482921";repeat_class "SINE";repeat_family "Alu";	chr2	61482627	61482736	exon	assembly	+	gene_id "ENSG00000270820.5"; ID "96132"; transcript_id "transcript47961.chr2.nnic"; exon "2"; exon_id "chr2.12757"; pos "mid"	0	0	0	0
chr2	65047845	65048387	-	repeat_id "MLT1F2,chr2,65047845,65048387";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	65047892	65048212	exon	assembly	-	gene_id "novel_gene_chr2_52165"; ID "97535"; transcript_id "transcript52164.chr2.nnic"; exon "3"; exon_id "chr2.13723"; pos "last"	0	0	0	0
chr2	65047845	65048387	-	repeat_id "MLT1F2,chr2,65047845,65048387";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	65047892	65048212	exon	assembly	-	gene_id "novel_gene_chr2_52167"; ID "97546"; transcript_id "transcript52166.chr2.nnic"; exon "3"; exon_id "chr2.13723"; pos "last"	0	0	0	0
chr2	65050865	65051501	-	repeat_id "L1MB8,chr2,65050865,65051501";repeat_class "LINE";repeat_family "L1";	chr2	65051279	65051337	exon	assembly	-	gene_id "novel_gene_chr2_52165"; ID "97534"; transcript_id "transcript52164.chr2.nnic"; exon "2"; exon_id "chr2.13725"; pos "mid"	0	0	0	0
chr2	65055512	65055630	+	repeat_id "AluJo,chr2,65055512,65055630";repeat_class "SINE";repeat_family "Alu";	chr2	65055530	65055620	exon	assembly	-	gene_id "novel_gene_chr2_52167"; ID "97545"; transcript_id "transcript52166.chr2.nnic"; exon "2"; exon_id "chr2.13727"; pos "mid"	0	0	0	0
chr2	65609745	65609923	-	repeat_id "AluJb,chr2,65609745,65609923";repeat_class "SINE";repeat_family "Alu";	chr2	65609777	65609902	exon	assembly	+	gene_id "ENSG00000204929.12"; ID "97855"; transcript_id "transcript53412.chr2.nnic"; exon "2"; exon_id "chr2.13897"; pos "mid"	0	0	0	0
chr2	65627901	65628461	+	repeat_id "MLT1G1,chr2,65627901,65628461";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	65628163	65628438	exon	assembly	+	gene_id "ENSG00000204929.12"; ID "97856"; transcript_id "transcript53412.chr2.nnic"; exon "3"; exon_id "chr2.13898"; pos "last"	0	0	0	0
chr2	71411475	71417501	-	repeat_id "L1HS,chr2,71411475,71417501";repeat_class "LINE";repeat_family "L1";	chr2	71417007	71417243	exon	assembly	+	gene_id "ENSG00000075292.18"; ID "99618"; transcript_id "transcript59293.chr2.nnic"; exon "1"; exon_id "chr2.15631"; pos "first"	0	0	0	0
chr2	73729193	73729323	+	repeat_id "FLAM_C,chr2,73729193,73729323";repeat_class "SINE";repeat_family "Alu";	chr2	73729169	73729305	exon	assembly	-	gene_id "ENSG00000144034.14"; ID "100588"; transcript_id "ENST00000463231.5"; exon "5"; exon_id "chr2.16275"; pos "last"	0	0	0	0
chr2	73732430	73732728	+	repeat_id "AluSq2,chr2,73732430,73732728";repeat_class "SINE";repeat_family "Alu";	chr2	73732584	73732700	exon	assembly	-	gene_id "ENSG00000144034.14"; ID "100592"; transcript_id "ENST00000409716.6"; exon "3"; exon_id "chr2.16278"; pos "mid"	0	49.3289	0	0
chr2	74201347	74201639	-	repeat_id "AluJb,chr2,74201347,74201639";repeat_class "SINE";repeat_family "Alu";	chr2	74201382	74201479	exon	assembly	+	gene_id "ENSG00000065911.11"; ID "100907"; transcript_id "transcript63126.chr2.nnic"; exon "2"; exon_id "chr2.16526"; pos "mid"	20.4898	123.577	23.2073	0
chr2	75520139	75520271	+	repeat_id "L2b,chr2,75520139,75520271";repeat_class "LINE";repeat_family "L2";	chr2	75520194	75520268	exon	assembly	-	gene_id "ENSG00000115363.13"; ID "101830"; transcript_id "transcript65905.chr2.nnic"; exon "3"; exon_id "chr2.17376"; pos "mid"	0	0	50.8351	0
chr2	84901597	84902046	-	repeat_id "MLT1G1,chr2,84901597,84902046";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	84901643	84901878	exon	assembly	-	gene_id "ENSG00000186854.10"; ID "102165"; transcript_id "ENST00000489999.1"; exon "2"; exon_id "chr2.17835"; pos "last"	0	0	0	0
chr2	85870104	85870311	+	repeat_id "L2a,chr2,85870104,85870311";repeat_class "LINE";repeat_family "L2";	chr2	85870072	85870258	exon	assembly	-	gene_id "ENSG00000115525.17"; ID "103065"; transcript_id "transcript70104.chr2.nic"; exon "2"; exon_id "chr2.18430"; pos "mid"	0	0	0	0
chr2	87030632	87030899	-	repeat_id "MLT1G3,chr2,87030632,87030899";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	87030675	87030907	exon	assembly	-	gene_id "ENSG00000231259.4"; ID "103610"; transcript_id "transcript71691.chr2.nnic"; exon "11"; exon_id "chr2.19063"; pos "last"	0	0	0	0
chr2	87030632	87030899	-	repeat_id "MLT1G3,chr2,87030632,87030899";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	87030675	87030907	exon	assembly	-	gene_id "ENSG00000231259.4"; ID "103622"; transcript_id "transcript71692.chr2.nnic"; exon "11"; exon_id "chr2.19063"; pos "last"	0	0	0	0
chr2	87077468	87077833	+	repeat_id "L2c,chr2,87077468,87077833";repeat_class "LINE";repeat_family "L2";	chr2	87077584	87077657	exon	assembly	-	gene_id "ENSG00000231259.4"; ID "103612"; transcript_id "transcript71692.chr2.nnic"; exon "1"; exon_id "chr2.19064"; pos "first"	0	0	0	0
chr2	87478047	87478424	-	repeat_id "MLT1B,chr2,87478047,87478424";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	87478122	87478230	exon	assembly	+	gene_id "ENSG00000222041.10"; ID "103669"; transcript_id "ENST00000414584.1"; exon "2"; exon_id "chr2.19125"; pos "mid"	0	0	0	0
chr2	88016358	88016547	-	repeat_id "U2,chr2,88016358,88016547";repeat_class "snRNA";repeat_family "snRNA";	chr2	88016354	88016547	exon	assembly	-	gene_id "ENSG00000222724.1"; ID "103826"; transcript_id "ENST00000410792.1"; exon "1"; exon_id "chr2.19241";	140.868	69.1625	114.932	35.4946
chr2	99156287	99156563	-	repeat_id "AluSx1,chr2,99156287,99156563";repeat_class "SINE";repeat_family "Alu";	chr2	99156301	99156426	exon	assembly	+	gene_id "ENSG00000144182.16"; ID "106093"; transcript_id "ENST00000393473.6"; exon "2"; exon_id "chr2.21677"; pos "mid"	0	3.0513	0	0
chr2	104897986	104898341	+	repeat_id "MLT1A0,chr2,104897986,104898341";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	104898064	104898274	exon	assembly	+	gene_id "ENSG00000269707.1"; ID "107775"; transcript_id "transcript81860.chr2.nnic"; exon "1"; exon_id "chr2.22997"; pos "first"	0	0	0	34.5086
chr2	105389947	105390248	+	repeat_id "AluY,chr2,105389947,105390248";repeat_class "SINE";repeat_family "Alu";	chr2	105390107	105390227	exon	assembly	-	gene_id "ENSG00000115641.18"; ID "107943"; transcript_id "ENST00000530340.5"; exon "3"; exon_id "chr2.23106"; pos "mid"	0	0	0	0
chr2	111471795	111472172	+	repeat_id "MLT1B,chr2,111471795,111472172";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	111471989	111472097	exon	assembly	-	gene_id "ENSG00000172965.14"; ID "109232"; transcript_id "ENST00000604981.5"; exon "2"; exon_id "chr2.24380"; pos "mid"	0	0	0	0
chr2	112545647	112545943	-	repeat_id "AluJb,chr2,112545647,112545943";repeat_class "SINE";repeat_family "Alu";	chr2	112545831	112545922	exon	assembly	+	gene_id "ENSG00000125630.15"; ID "109710"; transcript_id "ENST00000333990.10"; exon "2"; exon_id "chr2.24804"; pos "mid"	0	0	0	0
chr2	119239261	119239482	-	repeat_id "AluSx,chr2,119239261,119239482";repeat_class "SINE";repeat_family "Alu";	chr2	119239363	119239430	exon	assembly	+	gene_id "ENSG00000115107.19"; ID "110857"; transcript_id "ENST00000393106.6"; exon "2"; exon_id "chr2.25878"; pos "mid"	0	0	0	0
chr2	119679876	119680269	-	repeat_id "MLT1B,chr2,119679876,119680269";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	119680031	119680202	exon	assembly	+	gene_id "ENSG00000144120.12"; ID "110979"; transcript_id "transcript90974.chr2.nnic"; exon "2"; exon_id "chr2.26025"; pos "mid"	0	0	0	0
chr2	120724183	120724549	-	repeat_id "MSTB1,chr2,120724183,120724549";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	120724208	120724306	exon	assembly	+	gene_id "novel_gene_chr2_91507"; ID "111357"; transcript_id "transcript91506.chr2.nnic"; exon "2"; exon_id "chr2.26257"; pos "mid"	0	0	0	0
chr2	120724183	120724549	-	repeat_id "MSTB1,chr2,120724183,120724549";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	120724208	120724380	exon	assembly	+	gene_id "ENSG00000074047.21"; ID "111362"; transcript_id "transcript91494.chr2.nnic"; exon "2"; exon_id "chr2.26260"; pos "mid"	0	0	0	0
chr2	131144278	131144824	-	repeat_id "Tigger13a,chr2,131144278,131144824";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr2	131144408	131144449	exon	assembly	+	gene_id "ENSG00000115762.16"; ID "113310"; transcript_id "ENST00000403716.5"; exon "8"; exon_id "chr2.27989"; pos "mid"	0	18.3078	53.0453	0
chr2	137967129	137967421	+	repeat_id "AluJr,chr2,137967129,137967421";repeat_class "SINE";repeat_family "Alu";	chr2	137967097	137967444	exon	assembly	+	gene_id "ENSG00000150540.13"; ID "114829"; transcript_id "ENST00000280096.5"; exon "2"; exon_id "chr2.29105"; pos "last"	0	0	0	0
chr2	157826380	157826680	+	repeat_id "AluJb,chr2,157826380,157826680";repeat_class "SINE";repeat_family "Alu";	chr2	157826528	157826646	exon	assembly	-	gene_id "ENSG00000115170.13"; ID "117017"; transcript_id "transcript104164.chr2.nic"; exon "2"; exon_id "chr2.31486"; pos "mid"	0	0	0	0
chr2	162249555	162250178	+	repeat_id "HAL1ME,chr2,162249555,162250178";repeat_class "LINE";repeat_family "L1";	chr2	162249913	162250104	exon	assembly	+	gene_id "novel_gene_chr2_108047"; ID "118545"; transcript_id "transcript108055.chr2.nnic"; exon "3"; exon_id "chr2.32631"; pos "last"	0	0	0	0
chr2	162249555	162250178	+	repeat_id "HAL1ME,chr2,162249555,162250178";repeat_class "LINE";repeat_family "L1";	chr2	162249913	162250104	exon	assembly	+	gene_id "novel_gene_chr2_108047"; ID "118549"; transcript_id "transcript108059.chr2.nnic"; exon "3"; exon_id "chr2.32631"; pos "last"	0	0	0	0
chr2	187510952	187515862	+	repeat_id "Harlequin-int,chr2,187510952,187515862";repeat_class "LTR";repeat_family "ERV1";	chr2	187513616	187513641	exon	assembly	-	gene_id "ENSG00000003436.15"; ID "124415"; transcript_id "ENST00000392365.5"; exon "1"; exon_id "chr2.38060"; pos "first"	0	0	0	0
chr2	187510952	187515862	+	repeat_id "Harlequin-int,chr2,187510952,187515862";repeat_class "LTR";repeat_family "ERV1";	chr2	187513616	187513646	exon	assembly	-	gene_id "ENSG00000003436.15"; ID "124425"; transcript_id "ENST00000409676.5"; exon "2"; exon_id "chr2.38063"; pos "mid"	0	0	0	0
chr2	189448657	189448883	+	repeat_id "MER103C,chr2,189448657,189448883";repeat_class "DNA";repeat_family "hAT-Charlie";	chr2	189448801	189448834	exon	assembly	+	gene_id "ENSG00000115368.9"; ID "124902"; transcript_id "ENST00000436347.5"; exon "3"; exon_id "chr2.38402"; pos "mid"	0	0	0	72.9614
chr2	190415268	190415569	-	repeat_id "AluJr,chr2,190415268,190415569";repeat_class "SINE";repeat_family "Alu";	chr2	190415292	190415413	exon	assembly	+	gene_id "ENSG00000151690.14"; ID "125380"; transcript_id "ENST00000392328.5"; exon "2"; exon_id "chr2.38737"; pos "mid"	0	0	0	0
chr2	191682425	191682628	-	repeat_id "LFSINE_Vert,chr2,191682425,191682628";repeat_class "SINE";repeat_family "tRNA";	chr2	191682492	191682595	exon	assembly	+	gene_id "ENSG00000173559.12"; ID "126155"; transcript_id "ENST00000307834.9"; exon "4"; exon_id "chr2.39211"; pos "mid"	110.645	73.7394	39.784	142.965
chr2	191682425	191682628	-	repeat_id "LFSINE_Vert,chr2,191682425,191682628";repeat_class "SINE";repeat_family "tRNA";	chr2	191682492	191682595	exon	assembly	+	gene_id "ENSG00000173559.12"; ID "126163"; transcript_id "ENST00000307849.7"; exon "4"; exon_id "chr2.39211"; pos "mid"	110.645	73.7394	39.784	142.965
chr2	200885089	200885400	+	repeat_id "AluSx,chr2,200885089,200885400";repeat_class "SINE";repeat_family "Alu";	chr2	200885262	200885367	exon	assembly	-	gene_id "ENSG00000240344.8"; ID "127853"; transcript_id "ENST00000286175.12"; exon "4"; exon_id "chr2.40658"; pos "mid"	0	15.765	0	118.316
chr2	201141240	201141607	-	repeat_id "L1ME4b,chr2,201141240,201141607";repeat_class "LINE";repeat_family "L1";	chr2	201141374	201141598	exon	assembly	+	gene_id "ENSG00000003402.19"; ID "128099"; transcript_id "ENST00000341222.10"; exon "6"; exon_id "chr2.40845"; pos "last"	0	0	0	0
chr2	201141240	201141607	-	repeat_id "L1ME4b,chr2,201141240,201141607";repeat_class "LINE";repeat_family "L1";	chr2	201141374	201141598	exon	assembly	+	gene_id "ENSG00000003402.19"; ID "128106"; transcript_id "transcript137787.chr2.nic"; exon "6"; exon_id "chr2.40845"; pos "last"	0	0	0	0
chr2	201145306	201145469	+	repeat_id "X8_LINE,chr2,201145306,201145469";repeat_class "LINE";repeat_family "CR1";	chr2	201145378	201145432	exon	assembly	+	gene_id "ENSG00000003402.19"; ID "128076"; transcript_id "transcript137415.chr2.nnic"; exon "6"; exon_id "chr2.40834"; pos "mid"	53.7859	53.906	0	0
chr2	201145306	201145469	+	repeat_id "X8_LINE,chr2,201145306,201145469";repeat_class "LINE";repeat_family "CR1";	chr2	201145378	201145432	exon	assembly	+	gene_id "ENSG00000003402.19"; ID "128088"; transcript_id "ENST00000309955.7"; exon "6"; exon_id "chr2.40834"; pos "mid"	53.7859	53.906	0	0
chr2	201163984	201164293	+	repeat_id "AluSx1,chr2,201163984,201164293";repeat_class "SINE";repeat_family "Alu";	chr2	201164018	201164293	exon	assembly	+	gene_id "ENSG00000003402.19"; ID "128081"; transcript_id "transcript137415.chr2.nnic"; exon "11"; exon_id "chr2.40841"; pos "last"	18.441	0	80.6734	0
chr2	201721951	201722967	+	repeat_id "L1MB7,chr2,201721951,201722967";repeat_class "LINE";repeat_family "L1";	chr2	201721990	201723120	exon	assembly	-	gene_id "ENSG00000003393.14"; ID "128733"; transcript_id "ENST00000482891.5"; exon "23"; exon_id "chr2.41311"; pos "last"	0	0	0	0
chr2	203189855	203190150	+	repeat_id "AluSx,chr2,203189855,203190150";repeat_class "SINE";repeat_family "Alu";	chr2	203189862	203190157	exon	assembly	+	gene_id "ENSG00000144426.18"; ID "129246"; transcript_id "transcript141669.chr2.nnic"; exon "1"; exon_id "chr2.41770"; pos "first"	0	0	0	0
chr2	207241024	207241554	+	repeat_id "MLT1H,chr2,207241024,207241554";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	207241260	207241474	exon	assembly	+	gene_id "ENSG00000229647.1"; ID "130378"; transcript_id "transcript145394.chr2.nnic"; exon "2"; exon_id "chr2.42641"; pos "mid"	0	0	0	0
chr2	207245344	207245743	+	repeat_id "LTR16,chr2,207245344,207245743";repeat_class "LTR";repeat_family "ERVL";	chr2	207245289	207245666	exon	assembly	+	gene_id "ENSG00000229647.1"; ID "130382"; transcript_id "transcript145405.chr2.nnic"; exon "2"; exon_id "chr2.42644"; pos "mid"	17.4165	16.7821	121.562	0
chr2	208139041	208139396	-	repeat_id "Tigger3,chr2,208139041,208139396";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr2	208139068	208139133	exon	assembly	-	gene_id "ENSG00000163254.4"; ID "130726"; transcript_id "transcript146365.chr2.nnic"; exon "1"; exon_id "chr2.42889"; pos "first"	0	0	0	0
chr2	210016183	210016257	-	repeat_id "AluJb,chr2,210016183,210016257";repeat_class "SINE";repeat_family "Alu";	chr2	210016204	210016257	exon	assembly	+	gene_id "ENSG00000197713.14"; ID "131040"; transcript_id "ENST00000429921.5"; exon "4"; exon_id "chr2.43232"; pos "mid"	0	0	0	0
chr2	210016183	210016257	-	repeat_id "AluJb,chr2,210016183,210016257";repeat_class "SINE";repeat_family "Alu";	chr2	210016204	210016257	exon	assembly	+	gene_id "ENSG00000197713.14"; ID "131059"; transcript_id "ENST00000454822.5"; exon "3"; exon_id "chr2.43232"; pos "mid"	0	0	0	0
chr2	216107337	216107624	+	repeat_id "AluJo,chr2,216107337,216107624";repeat_class "SINE";repeat_family "Alu";	chr2	216107464	216107532	exon	assembly	+	gene_id "ENSG00000079246.15"; ID "132140"; transcript_id "ENST00000392133.7"; exon "1"; exon_id "chr2.44122"; pos "first"	0	0	0	0
chr2	216529190	216529604	+	repeat_id "LTR45B,chr2,216529190,216529604";repeat_class "LTR";repeat_family "ERV1";	chr2	216529270	216529587	exon	assembly	+	gene_id "ENSG00000197756.9"; ID "132379"; transcript_id "transcript150758.chr2.nic"; exon "2"; exon_id "chr2.44290"; pos "last"	52.7614	68.1451	0	0
chr2	217317788	217318180	-	repeat_id "MLT1E1A,chr2,217317788,217318180";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	217317966	217318201	exon	assembly	-	gene_id "ENSG00000231672.6"; ID "132483"; transcript_id "transcript151030.chr2.nnic"; exon "5"; exon_id "chr2.44385"; pos "mid"	0	0	0	0
chr2	217318675	217319680	-	repeat_id "L1ME3F,chr2,217318675,217319680";repeat_class "LINE";repeat_family "L1";	chr2	217318920	217319177	exon	assembly	-	gene_id "ENSG00000231672.6"; ID "132482"; transcript_id "transcript151030.chr2.nnic"; exon "4"; exon_id "chr2.44387"; pos "mid"	0	0	0	0
chr2	217327834	217328312	-	repeat_id "MLT2C2,chr2,217327834,217328312";repeat_class "LTR";repeat_family "ERVL";	chr2	217327997	217328152	exon	assembly	-	gene_id "ENSG00000231672.6"; ID "132480"; transcript_id "transcript151030.chr2.nnic"; exon "2"; exon_id "chr2.44382"; pos "mid"	0	0	0	0
chr2	219561753	219562075	-	repeat_id "MER102c,chr2,219561753,219562075";repeat_class "DNA";repeat_family "hAT-Charlie";	chr2	219561722	219562008	exon	assembly	-	gene_id "ENSG00000124006.14"; ID "134603"; transcript_id "ENST00000373873.8"; exon "9"; exon_id "chr2.46430"; pos "last"	32.2717	0	0	36.4805
chr2	219561753	219562075	-	repeat_id "MER102c,chr2,219561753,219562075";repeat_class "DNA";repeat_family "hAT-Charlie";	chr2	219561722	219562008	exon	assembly	-	gene_id "ENSG00000124006.14"; ID "134609"; transcript_id "transcript156076.chr2.nnic"; exon "5"; exon_id "chr2.46430"; pos "last"	32.2717	0	0	36.4805
chr2	229262605	229263063	-	repeat_id "MLT1C2,chr2,229262605,229263063";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr2	229262683	229262893	exon	assembly	-	gene_id "ENSG00000153823.18"; ID "136088"; transcript_id "ENST00000392054.7"; exon "2"; exon_id "chr2.47746"; pos "mid"	0	0	0	0
chr2	229932789	229933085	+	repeat_id "AluSg,chr2,229932789,229933085";repeat_class "SINE";repeat_family "Alu";	chr2	229932771	229932886	exon	assembly	+	gene_id "ENSG00000153832.11"; ID "136466"; transcript_id "ENST00000373652.7"; exon "2"; exon_id "chr2.47922"; pos "mid"	0	0	0	33.5226
chr2	229932789	229933085	+	repeat_id "AluSg,chr2,229932789,229933085";repeat_class "SINE";repeat_family "Alu";	chr2	229932771	229932920	exon	assembly	+	gene_id "ENSG00000153832.11"; ID "136472"; transcript_id "transcript161209.chr2.nic"; exon "2"; exon_id "chr2.47925"; pos "last"	0	0	0	33.5226
chr2	230328423	230328986	-	repeat_id "L1MC4a,chr2,230328423,230328986";repeat_class "LINE";repeat_family "L1";	chr2	230328757	230328831	exon	assembly	+	gene_id "ENSG00000185404.16"; ID "136628"; transcript_id "ENST00000415673.6"; exon "2"; exon_id "chr2.48126"; pos "mid"	7.17143	52.889	0	0
chr2	230417212	230417854	-	repeat_id "L1ME4a,chr2,230417212,230417854";repeat_class "LINE";repeat_family "L1";	chr2	230417591	230417665	exon	assembly	+	gene_id "ENSG00000067066.16"; ID "136692"; transcript_id "ENST00000409341.5"; exon "2"; exon_id "chr2.48150"; pos "mid"	13.8306	135.273	18.7869	0
chr2	230417212	230417854	-	repeat_id "L1ME4a,chr2,230417212,230417854";repeat_class "LINE";repeat_family "L1";	chr2	230417591	230417665	exon	assembly	+	gene_id "ENSG00000067066.16"; ID "136749"; transcript_id "ENST00000409112.5"; exon "2"; exon_id "chr2.48150"; pos "mid"	13.8306	135.273	18.7869	0
chr2	232547906	232550277	-	repeat_id "Tigger1,chr2,232547906,232550277";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr2	232547968	232550592	exon	assembly	-	gene_id "ENSG00000221944.6"; ID "137669"; transcript_id "ENST00000408957.4"; exon "1"; exon_id "chr2.48972";	0	105.269	36.4686	0
chr2	241074806	241076593	-	repeat_id "L1ME3C,chr2,241074806,241076593";repeat_class "LINE";repeat_family "L1";	chr2	241075547	241075682	exon	assembly	-	gene_id "ENSG00000122085.16"; ID "140751"; transcript_id "transcript173549.chr2.nic"; exon "6"; exon_id "chr2.51814"; pos "last"	0	0	0	0
chr2	241074806	241076593	-	repeat_id "L1ME3C,chr2,241074806,241076593";repeat_class "LINE";repeat_family "L1";	chr2	241075547	241075682	exon	assembly	-	gene_id "ENSG00000122085.16"; ID "140762"; transcript_id "transcript173606.chr2.nic"; exon "4"; exon_id "chr2.51814"; pos "last"	0	0	0	0
chr2	241320005	241320373	-	repeat_id "L1MD,chr2,241320005,241320373";repeat_class "LINE";repeat_family "L1";	chr2	241320203	241320287	exon	assembly	+	gene_id "ENSG00000168385.17"; ID "141169"; transcript_id "ENST00000402092.6"; exon "2"; exon_id "chr2.52059"; pos "mid"	0	0	0	0
chr2	241723814	241724034	+	repeat_id "AluJb,chr2,241723814,241724034";repeat_class "SINE";repeat_family "Alu";	chr2	241723791	241724036	exon	assembly	+	gene_id "ENSG00000168395.15"; ID "141711"; transcript_id "ENST00000406941.5"; exon "8"; exon_id "chr2.52601"; pos "last"	0	0	0	0
chr20	349182	349368	-	repeat_id "MIR,chr20,349182,349368";repeat_class "SINE";repeat_family "MIR";	chr20	349249	349363	exon	assembly	+	gene_id "ENSG00000125841.12"; ID "746401"; transcript_id "ENST00000382291.7"; exon "2"; exon_id "chr20.45"; pos "mid"	41.4919	224.269	181.239	242.547
chr20	435191	436061	-	repeat_id "MER21A,chr20,435191,436061";repeat_class "LTR";repeat_family "ERVL";	chr20	435480	435970	exon	assembly	-	gene_id "ENSG00000125875.13"; ID "746523"; transcript_id "ENST00000461304.5"; exon "10"; exon_id "chr20.142"; pos "last"	60.4451	42.7182	79.5683	41.4103
chr20	2491849	2492087	-	repeat_id "AluSc5,chr20,2491849,2492087";repeat_class "SINE";repeat_family "Alu";	chr20	2491841	2492084	exon	assembly	-	gene_id "ENSG00000088876.11"; ID "747130"; transcript_id "ENST00000381253.5"; exon "6"; exon_id "chr20.700"; pos "last"	0	0	0	0
chr20	2843152	2843456	+	repeat_id "AluSg,chr20,2843152,2843456";repeat_class "SINE";repeat_family "Alu";	chr20	2843134	2843512	exon	assembly	+	gene_id "ENSG00000215305.9"; ID "747393"; transcript_id "transcript4700.chr20.nnic"; exon "2"; exon_id "chr20.854"; pos "last"	0	0	0	0
chr20	3873829	3874352	+	repeat_id "L1ME3A,chr20,3873829,3874352";repeat_class "LINE";repeat_family "L1";	chr20	3873794	3874399	exon	assembly	+	gene_id "ENSG00000088888.17"; ID "748434"; transcript_id "transcript6697.chr20.nnic"; exon "7"; exon_id "chr20.1491"; pos "last"	0	19.3249	0	37.4665
chr20	5111329	5111638	+	repeat_id "AluSx4,chr20,5111329,5111638";repeat_class "SINE";repeat_family "Alu";	chr20	5111500	5111605	exon	assembly	-	gene_id "ENSG00000089063.14"; ID "748943"; transcript_id "ENST00000342308.9"; exon "2"; exon_id "chr20.1783"; pos "mid"	0	0	0	0
chr20	5111329	5111638	+	repeat_id "AluSx4,chr20,5111329,5111638";repeat_class "SINE";repeat_family "Alu";	chr20	5111500	5111605	exon	assembly	-	gene_id "ENSG00000089063.14"; ID "748949"; transcript_id "ENST00000379286.6"; exon "2"; exon_id "chr20.1783"; pos "mid"	0	0	0	0
chr20	5609591	5609894	+	repeat_id "Eutr11,chr20,5609591,5609894";repeat_class "DNA";repeat_family "DNA";	chr20	5609640	5609811	exon	assembly	-	gene_id "ENSG00000125772.12"; ID "749043"; transcript_id "transcript9417.chr20.nnic"; exon "2"; exon_id "chr20.1892"; pos "mid"	37.9063	0	0	0
chr20	17505737	17505868	+	repeat_id "MER5A,chr20,17505737,17505868";repeat_class "DNA";repeat_family "hAT-Charlie";	chr20	17505734	17505831	exon	assembly	-	gene_id "ENSG00000125864.13"; ID "750791"; transcript_id "transcript12877.chr20.nnic"; exon "1"; exon_id "chr20.3228"; pos "first"	0	0	0	0
chr20	18568601	18568778	-	repeat_id "AluSg4,chr20,18568601,18568778";repeat_class "SINE";repeat_family "Alu";	chr20	18568636	18568709	exon	assembly	+	gene_id "ENSG00000232388.4"; ID "751534"; transcript_id "transcript15956.chr20.nnic"; exon "2"; exon_id "chr20.3694"; pos "mid"	0	0	0	0
chr20	31780910	31781211	-	repeat_id "AluJr,chr20,31780910,31781211";repeat_class "SINE";repeat_family "Alu";	chr20	31780939	31781046	exon	assembly	+	gene_id "ENSG00000088325.15"; ID "753378"; transcript_id "ENST00000340513.4"; exon "11"; exon_id "chr20.5377"; pos "mid"	0	0	0	0
chr20	32793486	32793596	+	repeat_id "Kanga11a,chr20,32793486,32793596";repeat_class "DNA";repeat_family "TcMar-Tc2";	chr20	32793536	32793595	exon	assembly	+	gene_id "ENSG00000088305.18"; ID "753941"; transcript_id "ENST00000328111.6"; exon "10"; exon_id "chr20.5813"; pos "mid"	0	0	0	0
chr20	34084517	34084924	+	repeat_id "MLT1G3,chr20,34084517,34084924";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr20	34084661	34084884	exon	assembly	+	gene_id "ENSG00000125970.11"; ID "754521"; transcript_id "transcript25399.chr20.nnic"; exon "10"; exon_id "chr20.6374"; pos "last"	0	0	0	0
chr20	34369361	34369508	-	repeat_id "MamTip2b,chr20,34369361,34369508";repeat_class "DNA";repeat_family "hAT-Tip100";	chr20	34369394	34369470	exon	assembly	+	gene_id "ENSG00000078747.14"; ID "754620"; transcript_id "ENST00000374864.8"; exon "2"; exon_id "chr20.6462"; pos "mid"	733.538	385.478	485.144	425.936
chr20	34369361	34369508	-	repeat_id "MamTip2b,chr20,34369361,34369508";repeat_class "DNA";repeat_family "hAT-Tip100";	chr20	34369394	34369470	exon	assembly	+	gene_id "ENSG00000078747.14"; ID "754646"; transcript_id "ENST00000262650.10"; exon "2"; exon_id "chr20.6462"; pos "mid"	733.538	385.478	485.144	425.936
chr20	34417101	34417396	-	repeat_id "AluSp,chr20,34417101,34417396";repeat_class "SINE";repeat_family "Alu";	chr20	34417117	34417239	exon	assembly	+	gene_id "ENSG00000078747.14"; ID "754651"; transcript_id "ENST00000262650.10"; exon "7"; exon_id "chr20.6487"; pos "mid"	0	0	0	0
chr20	35215916	35216227	+	repeat_id "AluSp,chr20,35215916,35216227";repeat_class "SINE";repeat_family "Alu";	chr20	35215893	35216240	exon	assembly	+	gene_id "ENSG00000101000.5"; ID "755268"; transcript_id "transcript29809.chr20.nic"; exon "4"; exon_id "chr20.6885"; pos "last"	0	0	0	0
chr20	35306927	35307046	-	repeat_id "MIR3,chr20,35306927,35307046";repeat_class "SINE";repeat_family "MIR";	chr20	35306985	35307055	exon	assembly	-	gene_id "ENSG00000101019.21"; ID "755434"; transcript_id "ENST00000496812.5"; exon "1"; exon_id "chr20.6983"; pos "first"	0	0	0	0
chr20	35734877	35735041	-	repeat_id "X5a_DNA,chr20,35734877,35735041";repeat_class "DNA";repeat_family "TcMar";	chr20	35734876	35735081	exon	assembly	-	gene_id "ENSG00000131051.22"; ID "756314"; transcript_id "ENST00000397370.3"; exon "4"; exon_id "chr20.7407"; pos "last"	0	0	0	0
chr20	37297148	37297557	+	repeat_id "MARNA,chr20,37297148,37297557";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr20	37297296	37297534	exon	assembly	+	gene_id "ENSG00000101363.12"; ID "757303"; transcript_id "ENST00000397152.7"; exon "2"; exon_id "chr20.8216"; pos "mid"	201.825	50.3462	36.4686	34.5086
chr20	37297148	37297557	+	repeat_id "MARNA,chr20,37297148,37297557";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr20	37297345	37297534	exon	assembly	+	gene_id "ENSG00000101363.12"; ID "757313"; transcript_id "ENST00000397151.1"; exon "1"; exon_id "chr20.8221"; pos "first"	201.825	50.3462	36.4686	34.5086
chr20	37298742	37299041	-	repeat_id "AluJb,chr20,37298742,37299041";repeat_class "SINE";repeat_family "Alu";	chr20	37298763	37298879	exon	assembly	+	gene_id "ENSG00000101363.12"; ID "757304"; transcript_id "ENST00000397152.7"; exon "3"; exon_id "chr20.8217"; pos "mid"	32.7838	27.4616	0	32.5367
chr20	37298742	37299041	-	repeat_id "AluJb,chr20,37298742,37299041";repeat_class "SINE";repeat_family "Alu";	chr20	37298763	37298879	exon	assembly	+	gene_id "ENSG00000101363.12"; ID "757309"; transcript_id "transcript37175.chr20.nnic"; exon "2"; exon_id "chr20.8217"; pos "mid"	32.7838	27.4616	0	32.5367
chr20	37298742	37299041	-	repeat_id "AluJb,chr20,37298742,37299041";repeat_class "SINE";repeat_family "Alu";	chr20	37298763	37298879	exon	assembly	+	gene_id "ENSG00000101363.12"; ID "757314"; transcript_id "ENST00000397151.1"; exon "2"; exon_id "chr20.8217"; pos "mid"	32.7838	27.4616	0	32.5367
chr20	38087870	38087996	-	repeat_id "L2b,chr20,38087870,38087996";repeat_class "LINE";repeat_family "L2";	chr20	38087863	38088011	exon	assembly	+	gene_id "ENSG00000101413.11"; ID "757598"; transcript_id "transcript38023.chr20.nnic"; exon "2"; exon_id "chr20.8437"; pos "mid"	21.5145	0	0	0
chr20	38425801	38426079	+	repeat_id "AluJr,chr20,38425801,38426079";repeat_class "SINE";repeat_family "Alu";	chr20	38425935	38426048	exon	assembly	-	gene_id "ENSG00000196756.11"; ID "757735"; transcript_id "transcript38286.chr20.nic"; exon "5"; exon_id "chr20.8603"; pos "mid"	19.4655	0	0	0
chr20	46023264	46023900	+	repeat_id "L2b,chr20,46023264,46023900";repeat_class "LINE";repeat_family "L2";	chr20	46023369	46023581	exon	assembly	+	gene_id "ENSG00000124140.13"; ID "760273"; transcript_id "ENST00000628272.1"; exon "2"; exon_id "chr20.10681"; pos "last"	0	0	0	0
chr20	47842837	47843313	+	repeat_id "L2a,chr20,47842837,47843313";repeat_class "LINE";repeat_family "L2";	chr20	47842917	47843179	exon	assembly	-	gene_id "novel_gene_chr20_48223"; ID "761376"; transcript_id "transcript48222.chr20.nnic"; exon "1"; exon_id "chr20.11336"; pos "first"	0	0	0	0
chr20	47842837	47843313	+	repeat_id "L2a,chr20,47842837,47843313";repeat_class "LINE";repeat_family "L2";	chr20	47843179	47843291	exon	assembly	-	gene_id "novel_gene_chr20_48202"; ID "761405"; transcript_id "transcript48201.chr20.nnic"; exon "2"; exon_id "chr20.11340"; pos "mid"	0	0	0	0
chr20	49179098	49179272	+	repeat_id "AluSq2,chr20,49179098,49179272";repeat_class "SINE";repeat_family "Alu";	chr20	49179122	49179244	exon	assembly	-	gene_id "ENSG00000124214.19"; ID "761687"; transcript_id "ENST00000340954.11"; exon "2"; exon_id "chr20.11562"; pos "mid"	0	0	0	0
chr20	49179098	49179272	+	repeat_id "AluSq2,chr20,49179098,49179272";repeat_class "SINE";repeat_family "Alu";	chr20	49179122	49179244	exon	assembly	-	gene_id "ENSG00000124214.19"; ID "761729"; transcript_id "ENST00000437404.2"; exon "2"; exon_id "chr20.11562"; pos "mid"	0	0	0	0
chr20	49281578	49282133	-	repeat_id "HERVIP10B3-int,chr20,49281578,49282133";repeat_class "LTR";repeat_family "ERV1";	chr20	49281752	49281818	exon	assembly	+	gene_id "ENSG00000177410.12"; ID "761839"; transcript_id "ENST00000450535.5"; exon "5"; exon_id "chr20.11652"; pos "mid"	0	0	30.9431	0
chr20	50115485	50115637	+	repeat_id "MIRb,chr20,50115485,50115637";repeat_class "SINE";repeat_family "MIR";	chr20	50115485	50115621	exon	assembly	-	gene_id "ENSG00000244687.11"; ID "762180"; transcript_id "ENST00000371677.7"; exon "2"; exon_id "chr20.11873"; pos "mid"	6.147	0	0	0
chr20	50426503	50426813	+	repeat_id "AluSx,chr20,50426503,50426813";repeat_class "SINE";repeat_family "Alu";	chr20	50426660	50426780	exon	assembly	-	gene_id "ENSG00000244376.3"; ID "762368"; transcript_id "transcript52543.chr20.nnic"; exon "2"; exon_id "chr20.12003"; pos "mid"	0	0	0	0
chr20	50875951	50876248	-	repeat_id "AluSz,chr20,50875951,50876248";repeat_class "SINE";repeat_family "Alu";	chr20	50875997	50876093	exon	assembly	+	gene_id "ENSG00000124243.17"; ID "762522"; transcript_id "ENST00000358791.9"; exon "5"; exon_id "chr20.12103"; pos "mid"	0	0	0	0
chr20	50941107	50941219	+	repeat_id "AluJb,chr20,50941107,50941219";repeat_class "SINE";repeat_family "Alu";	chr20	50941105	50941209	exon	assembly	-	gene_id "ENSG00000000419.12"; ID "762676"; transcript_id "ENST00000371584.8"; exon "7"; exon_id "chr20.12168"; pos "mid"	39.9555	41.1925	36.4686	88.7367
chr20	50941107	50941219	+	repeat_id "AluJb,chr20,50941107,50941219";repeat_class "SINE";repeat_family "Alu";	chr20	50941129	50941209	exon	assembly	-	gene_id "ENSG00000000419.12"; ID "762636"; transcript_id "ENST00000371582.8"; exon "7"; exon_id "chr20.12160"; pos "mid"	39.9555	41.1925	36.4686	88.7367
chr20	54208786	54208923	-	repeat_id "MIRb,chr20,54208786,54208923";repeat_class "SINE";repeat_family "MIR";	chr20	54208835	54208915	exon	assembly	+	gene_id "ENSG00000101132.9"; ID "763101"; transcript_id "ENST00000487129.1"; exon "2"; exon_id "chr20.12523"; pos "mid"	0	0	0	0
chr20	56388530	56388834	+	repeat_id "AluSq10,chr20,56388530,56388834";repeat_class "SINE";repeat_family "Alu";	chr20	56388687	56388784	exon	assembly	-	gene_id "ENSG00000087586.17"; ID "763126"; transcript_id "transcript54485.chr20.nic"; exon "3"; exon_id "chr20.12613"; pos "mid"	12.2939	26.953	14.3664	0
chr20	56388530	56388834	+	repeat_id "AluSq10,chr20,56388530,56388834";repeat_class "SINE";repeat_family "Alu";	chr20	56388687	56388784	exon	assembly	-	gene_id "ENSG00000087586.17"; ID "763138"; transcript_id "transcript54488.chr20.nic"; exon "3"; exon_id "chr20.12613"; pos "mid"	12.2939	26.953	14.3664	0
chr20	56388530	56388834	+	repeat_id "AluSq10,chr20,56388530,56388834";repeat_class "SINE";repeat_family "Alu";	chr20	56388687	56388784	exon	assembly	-	gene_id "ENSG00000087586.17"; ID "763212"; transcript_id "ENST00000371356.6"; exon "2"; exon_id "chr20.12613"; pos "mid"	12.2939	26.953	14.3664	0
chr20	56388530	56388834	+	repeat_id "AluSq10,chr20,56388530,56388834";repeat_class "SINE";repeat_family "Alu";	chr20	56388687	56388784	exon	assembly	-	gene_id "ENSG00000087586.17"; ID "763223"; transcript_id "ENST00000395911.5"; exon "2"; exon_id "chr20.12613"; pos "mid"	12.2939	26.953	14.3664	0
chr20	56388530	56388834	+	repeat_id "AluSq10,chr20,56388530,56388834";repeat_class "SINE";repeat_family "Alu";	chr20	56388687	56388784	exon	assembly	-	gene_id "ENSG00000087586.17"; ID "763244"; transcript_id "ENST00000420474.5"; exon "3"; exon_id "chr20.12613"; pos "mid"	12.2939	26.953	14.3664	0
chr21	5499678	5500095	+	repeat_id "L1M3a,chr21,5499678,5500095";repeat_class "LINE";repeat_family "L1";	chr21	5499999	5500090	exon	assembly	-	gene_id "ENSG00000279094.3"; ID "766291"; transcript_id "transcript128.chr21.nnic"; exon "2"; exon_id "chr21.93"; pos "mid"	0	0	0	0
chr21	5499678	5500095	+	repeat_id "L1M3a,chr21,5499678,5500095";repeat_class "LINE";repeat_family "L1";	chr21	5499999	5500101	exon	assembly	-	gene_id "ENSG00000279094.3"; ID "766303"; transcript_id "ENST00000624261.1"; exon "2"; exon_id "chr21.100"; pos "mid"	0	0	0	0
chr21	5499678	5500095	+	repeat_id "L1M3a,chr21,5499678,5500095";repeat_class "LINE";repeat_family "L1";	chr21	5500067	5500090	exon	assembly	-	gene_id "ENSG00000279094.3"; ID "766299"; transcript_id "transcript131.chr21.nnic"; exon "2"; exon_id "chr21.97"; pos "mid"	0	0	0	0
chr21	5499678	5500095	+	repeat_id "L1M3a,chr21,5499678,5500095";repeat_class "LINE";repeat_family "L1";	chr21	5500067	5500101	exon	assembly	-	gene_id "ENSG00000279094.3"; ID "766307"; transcript_id "ENST00000624859.3"; exon "2"; exon_id "chr21.102"; pos "mid"	0	0	0	0
chr21	5565987	5566266	-	repeat_id "L1MB3,chr21,5565987,5566266";repeat_class "LINE";repeat_family "L1";	chr21	5566125	5566183	exon	assembly	+	gene_id "ENSG00000274333.4"; ID "766312"; transcript_id "ENST00000624627.3"; exon "2"; exon_id "chr21.104"; pos "mid"	0	0	0	0
chr21	6667831	6668248	+	repeat_id "L1M3a,chr21,6667831,6668248";repeat_class "LINE";repeat_family "L1";	chr21	6668152	6668243	exon	assembly	-	gene_id "ENSG00000278878.1"; ID "766457"; transcript_id "ENST00000623225.1"; exon "2"; exon_id "chr21.309"; pos "mid"	0	0	0	0
chr21	6724265	6724682	-	repeat_id "L1M3a,chr21,6724265,6724682";repeat_class "LINE";repeat_family "L1";	chr21	6724259	6724293	exon	assembly	+	gene_id "ENSG00000280164.1"; ID "766462"; transcript_id "ENST00000623892.1"; exon "2"; exon_id "chr21.311"; pos "mid"	0	0	0	0
chr21	6994901	6995318	+	repeat_id "L1M3a,chr21,6994901,6995318";repeat_class "LINE";repeat_family "L1";	chr21	6995222	6995313	exon	assembly	-	gene_id "ENSG00000279313.1"; ID "766476"; transcript_id "ENST00000623347.1"; exon "2"; exon_id "chr21.366"; pos "mid"	0	0	0	0
chr21	6994901	6995318	+	repeat_id "L1M3a,chr21,6994901,6995318";repeat_class "LINE";repeat_family "L1";	chr21	6995222	6995324	exon	assembly	-	gene_id "ENSG00000280018.3"; ID "766471"; transcript_id "ENST00000624728.1"; exon "2"; exon_id "chr21.364"; pos "mid"	0	0	0	0
chr21	8200705	8201016	-	repeat_id "AluSp,chr21,8200705,8201016";repeat_class "SINE";repeat_family "Alu";	chr21	8200738	8201052	exon	assembly	+	gene_id "ENSG00000278996.1"; ID "766542"; transcript_id "transcript583.chr21.nic"; exon "2"; exon_id "chr21.504"; pos "mid"	0	0	0	0
chr21	8222947	8223078	-	repeat_id "FLAM_C,chr21,8222947,8223078";repeat_class "SINE";repeat_family "Alu";	chr21	8222961	8223057	exon	assembly	+	gene_id "ENSG00000278996.1"; ID "766543"; transcript_id "transcript583.chr21.nic"; exon "3"; exon_id "chr21.505"; pos "mid"	0	0	0	0
chr21	17604162	17604454	+	repeat_id "AluSq2,chr21,17604162,17604454";repeat_class "SINE";repeat_family "Alu";	chr21	17604145	17604276	exon	assembly	-	gene_id "ENSG00000154640.14"; ID "767266"; transcript_id "ENST00000339775.10"; exon "4"; exon_id "chr21.1412"; pos "mid"	0	0	0	0
chr21	25569687	25569931	-	repeat_id "MamTip2b,chr21,25569687,25569931";repeat_class "DNA";repeat_family "hAT-Tip100";	chr21	25569837	25569921	exon	assembly	+	gene_id "ENSG00000234883.5"; ID "767419"; transcript_id "transcript8196.chr21.nic"; exon "2"; exon_id "chr21.1719"; pos "mid"	0	11.1881	0	36.4805
chr21	28998610	28998908	+	repeat_id "AluY,chr21,28998610,28998908";repeat_class "SINE";repeat_family "Alu";	chr21	28998589	28998718	exon	assembly	-	gene_id "ENSG00000176054.6"; ID "767893"; transcript_id "transcript9694.chr21.nnic"; exon "3"; exon_id "chr21.2108"; pos "mid"	0	0	0	0
chr21	28998610	28998908	+	repeat_id "AluY,chr21,28998610,28998908";repeat_class "SINE";repeat_family "Alu";	chr21	28998589	28998718	exon	assembly	-	gene_id "ENSG00000176054.6"; ID "767898"; transcript_id "transcript9696.chr21.nnic"; exon "3"; exon_id "chr21.2108"; pos "mid"	0	0	0	0
chr21	28999993	29001393	+	repeat_id "LTR12C,chr21,28999993,29001393";repeat_class "LTR";repeat_family "ERV1";	chr21	29001330	29001384	exon	assembly	-	gene_id "ENSG00000176054.6"; ID "767892"; transcript_id "transcript9694.chr21.nnic"; exon "2"; exon_id "chr21.2107"; pos "mid"	76.8371	0	78.4631	0
chr21	28999993	29001393	+	repeat_id "LTR12C,chr21,28999993,29001393";repeat_class "LTR";repeat_family "ERV1";	chr21	29001330	29001384	exon	assembly	-	gene_id "ENSG00000176054.6"; ID "767897"; transcript_id "transcript9696.chr21.nnic"; exon "2"; exon_id "chr21.2107"; pos "mid"	76.8371	0	78.4631	0
chr21	29003352	29003635	+	repeat_id "AluSx,chr21,29003352,29003635";repeat_class "SINE";repeat_family "Alu";	chr21	29003432	29003616	exon	assembly	-	gene_id "ENSG00000176054.6"; ID "767896"; transcript_id "transcript9696.chr21.nnic"; exon "1"; exon_id "chr21.2110"; pos "first"	0	0	0	0
chr21	29009393	29009693	-	repeat_id "AluY,chr21,29009393,29009693";repeat_class "SINE";repeat_family "Alu";	chr21	29009595	29009692	exon	assembly	-	gene_id "ENSG00000156253.6"; ID "767920"; transcript_id "ENST00000486719.5"; exon "2"; exon_id "chr21.2122"; pos "mid"	0	0	0	0
chr21	29071729	29072359	+	repeat_id "L2a,chr21,29071729,29072359";repeat_class "LINE";repeat_family "L2";	chr21	29071952	29071988	exon	assembly	-	gene_id "ENSG00000156261.12"; ID "768041"; transcript_id "ENST00000626972.2"; exon "2"; exon_id "chr21.2204"; pos "mid"	0	0	0	0
chr21	33262541	33262733	-	repeat_id "AluJr,chr21,33262541,33262733";repeat_class "SINE";repeat_family "Alu";	chr21	33262561	33262756	exon	assembly	+	gene_id "ENSG00000159110.19"; ID "769083"; transcript_id "ENST00000382264.7"; exon "9"; exon_id "chr21.2995"; pos "last"	0	0	0	0
chr21	33616287	33616591	-	repeat_id "AluSp,chr21,33616287,33616591";repeat_class "SINE";repeat_family "Alu";	chr21	33616287	33616603	exon	assembly	-	gene_id "ENSG00000205758.11"; ID "769623"; transcript_id "ENST00000413017.2"; exon "6"; exon_id "chr21.3308"; pos "last"	0	0	0	36.4805
chr21	33945809	33945927	+	repeat_id "FLAM_A,chr21,33945809,33945927";repeat_class "SINE";repeat_family "Alu";	chr21	33945810	33945895	exon	assembly	+	gene_id "ENSG00000237945.7"; ID "769855"; transcript_id "ENST00000427447.5"; exon "2"; exon_id "chr21.3515"; pos "mid"	0	0	0	0
chr21	36393447	36393753	-	repeat_id "AluSp,chr21,36393447,36393753";repeat_class "SINE";repeat_family "Alu";	chr21	36393472	36393546	exon	assembly	+	gene_id "ENSG00000159259.7"; ID "770516"; transcript_id "transcript17474.chr21.nnic"; exon "5"; exon_id "chr21.4043"; pos "mid"	0	0	0	0
chr21	36415746	36416052	-	repeat_id "AluSz,chr21,36415746,36416052";repeat_class "SINE";repeat_family "Alu";	chr21	36415774	36415915	exon	assembly	+	gene_id "ENSG00000159259.7"; ID "770541"; transcript_id "transcript17480.chr21.nnic"; exon "14"; exon_id "chr21.4054"; pos "mid"	0	0	0	0
chr21	42883435	42883845	+	repeat_id "MLT1C2,chr21,42883435,42883845";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr21	42883606	42883795	exon	assembly	+	gene_id "ENSG00000160194.17"; ID "772495"; transcript_id "ENST00000460259.1"; exon "2"; exon_id "chr21.5884"; pos "mid"	0	0	17.6818	0
chr21	46455558	46456078	+	repeat_id "MLT1G3,chr21,46455558,46456078";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr21	46455697	46455918	exon	assembly	-	gene_id "novel_gene_chr21_26894"; ID "774543"; transcript_id "transcript26893.chr21.nnic"; exon "2"; exon_id "chr21.7736"; pos "mid"	0	0	0	0
chr22	17050118	17050278	+	repeat_id "AluJr,chr22,17050118,17050278";repeat_class "SINE";repeat_family "Alu";	chr22	17050161	17050265	exon	assembly	+	gene_id "ENSG00000237438.7"; ID "775160"; transcript_id "transcript819.chr22.nnic"; exon "4"; exon_id "chr22.350"; pos "last"	0	0	0	0
chr22	21924889	21925193	-	repeat_id "AluSx1,chr22,21924889,21925193";repeat_class "SINE";repeat_family "Alu";	chr22	21924876	21925028	exon	assembly	-	gene_id "ENSG00000100034.13"; ID "778151"; transcript_id "transcript7965.chr22.nic"; exon "8"; exon_id "chr22.3200"; pos "last"	0	0	0	0
chr22	23891139	23891668	-	repeat_id "MLT1E2,chr22,23891139,23891668";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr22	23891180	23891452	exon	assembly	-	gene_id "ENSG00000218537.1"; ID "778938"; transcript_id "transcript9578.chr22.nnic"; exon "3"; exon_id "chr22.4063"; pos "last"	0	0	0	0
chr22	23926266	23926555	+	repeat_id "AluJb,chr22,23926266,23926555";repeat_class "SINE";repeat_family "Alu";	chr22	23926444	23926520	exon	assembly	-	gene_id "ENSG00000218537.1"; ID "778937"; transcript_id "transcript9578.chr22.nnic"; exon "2"; exon_id "chr22.4056"; pos "mid"	0	0	0	36.4805
chr22	25453306	25453591	-	repeat_id "AluJb,chr22,25453306,25453591";repeat_class "SINE";repeat_family "Alu";	chr22	25453316	25453434	exon	assembly	+	gene_id "ENSG00000100058.12"; ID "779713"; transcript_id "transcript11201.chr22.nnic"; exon "2"; exon_id "chr22.4920"; pos "mid"	0	0	59.6762	0
chr22	26511938	26512164	-	repeat_id "MIRb,chr22,26511938,26512164";repeat_class "SINE";repeat_family "MIR";	chr22	26512099	26512175	exon	assembly	-	gene_id "ENSG00000100109.16"; ID "779978"; transcript_id "ENST00000407690.5"; exon "2"; exon_id "chr22.5230"; pos "mid"	0	9.66245	39.784	34.5086
chr22	26511938	26512164	-	repeat_id "MIRb,chr22,26511938,26512164";repeat_class "SINE";repeat_family "MIR";	chr22	26512099	26512175	exon	assembly	-	gene_id "ENSG00000100109.16"; ID "780018"; transcript_id "ENST00000407148.5"; exon "2"; exon_id "chr22.5230"; pos "mid"	0	9.66245	39.784	34.5086
chr22	28848242	28848502	-	repeat_id "AluJr,chr22,28848242,28848502";repeat_class "SINE";repeat_family "Alu";	chr22	28848391	28848471	exon	assembly	+	gene_id "ENSG00000226471.6"; ID "781022"; transcript_id "transcript14132.chr22.nnic"; exon "3"; exon_id "chr22.5939"; pos "mid"	0	0	0	0
chr22	29754590	29754885	+	repeat_id "AluJb,chr22,29754590,29754885";repeat_class "SINE";repeat_family "Alu";	chr22	29754749	29754863	exon	assembly	-	gene_id "ENSG00000100319.12"; ID "781770"; transcript_id "transcript16303.chr22.nnic"; exon "2"; exon_id "chr22.6475"; pos "mid"	0	0	0	0
chr22	30603833	30604350	-	repeat_id "LTR65,chr22,30603833,30604350";repeat_class "LTR";repeat_family "ERV1";	chr22	30603780	30604102	exon	assembly	-	gene_id "ENSG00000100029.17"; ID "782408"; transcript_id "ENST00000492986.1"; exon "3"; exon_id "chr22.7032"; pos "last"	0	0	0	0
chr22	36481703	36481993	-	repeat_id "AluSc,chr22,36481703,36481993";repeat_class "SINE";repeat_family "Alu";	chr22	36481655	36481983	exon	assembly	-	gene_id "ENSG00000100348.9"; ID "785104"; transcript_id "transcript24320.chr22.nnic"; exon "1"; exon_id "chr22.8992"; pos "first"	12.294	17.2907	46.4146	0
chr22	37233613	37233913	-	repeat_id "LTR16C,chr22,37233613,37233913";repeat_class "LTR";repeat_family "ERVL";	chr22	37233658	37233807	exon	assembly	-	gene_id "ENSG00000128340.14"; ID "785415"; transcript_id "transcript26185.chr22.nnic"; exon "3"; exon_id "chr22.9475"; pos "last"	0	0	0	0
chr22	37674527	37674842	+	repeat_id "AluSx1,chr22,37674527,37674842";repeat_class "SINE";repeat_family "Alu";	chr22	37674527	37674902	exon	assembly	+	gene_id "ENSG00000100097.11"; ID "785720"; transcript_id "transcript26479.chr22.nnic"; exon "1"; exon_id "chr22.9720"; pos "first"	0	0	0	0
chr22	38665483	38665679	+	repeat_id "L1ME3A,chr22,38665483,38665679";repeat_class "LINE";repeat_family "L1";	chr22	38665546	38665685	exon	assembly	+	gene_id "ENSG00000100211.10"; ID "786648"; transcript_id "ENST00000396811.6"; exon "2"; exon_id "chr22.10526"; pos "mid"	0	20.8505	3.31533	0
chr22	40860657	40860863	-	repeat_id "AluJb,chr22,40860657,40860863";repeat_class "SINE";repeat_family "Alu";	chr22	40860678	40860793	exon	assembly	+	gene_id "ENSG00000196236.12"; ID "787932"; transcript_id "ENST00000482652.1"; exon "2"; exon_id "chr22.11668"; pos "mid"	0	0	0	0
chr22	42518430	42518824	+	repeat_id "L2b,chr22,42518430,42518824";repeat_class "LINE";repeat_family "L2";	chr22	42518613	42518728	exon	assembly	-	gene_id "ENSG00000189306.10"; ID "789395"; transcript_id "transcript41529.chr22.nic"; exon "2"; exon_id "chr22.12674"; pos "mid"	0	0	0	0
chr22	42612547	42612845	+	repeat_id "AluSx1,chr22,42612547,42612845";repeat_class "SINE";repeat_family "Alu";	chr22	42612542	42612658	exon	assembly	-	gene_id "ENSG00000100227.17"; ID "789530"; transcript_id "transcript42316.chr22.nnic"; exon "2"; exon_id "chr22.12807"; pos "mid"	0	0	0	34.5086
chr22	45134379	45134855	-	repeat_id "MLT1J,chr22,45134379,45134855";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr22	45134290	45134797	exon	assembly	-	gene_id "ENSG00000226328.6"; ID "790336"; transcript_id "ENST00000432502.1"; exon "2"; exon_id "chr22.13517"; pos "last"	16.9043	0	0	0
chr22	45138802	45138936	+	repeat_id "FLAM_C,chr22,45138802,45138936";repeat_class "SINE";repeat_family "Alu";	chr22	45138824	45138916	exon	assembly	-	gene_id "ENSG00000226328.6"; ID "790332"; transcript_id "ENST00000426282.6"; exon "2"; exon_id "chr22.13516"; pos "mid"	0	0	0	0
chr22	45166268	45166585	-	repeat_id "AluSz,chr22,45166268,45166585";repeat_class "SINE";repeat_family "Alu";	chr22	45166309	45166430	exon	assembly	+	gene_id "ENSG00000093000.18"; ID "790384"; transcript_id "transcript44597.chr22.nic"; exon "2"; exon_id "chr22.13543"; pos "mid"	0	12.7136	0	0
chr22	45166268	45166585	-	repeat_id "AluSz,chr22,45166268,45166585";repeat_class "SINE";repeat_family "Alu";	chr22	45166309	45166430	exon	assembly	+	gene_id "ENSG00000093000.18"; ID "790397"; transcript_id "ENST00000424634.5"; exon "2"; exon_id "chr22.13543"; pos "mid"	0	12.7136	0	0
chr22	46167372	46167660	+	repeat_id "AluJb,chr22,46167372,46167660";repeat_class "SINE";repeat_family "Alu";	chr22	46167528	46167626	exon	assembly	-	gene_id "novel_gene_chr22_46381"; ID "790981"; transcript_id "transcript46380.chr22.nnic"; exon "2"; exon_id "chr22.14031"; pos "mid"	0	0	0	0
chr22	46292169	46292357	-	repeat_id "AluJr,chr22,46292169,46292357";repeat_class "SINE";repeat_family "Alu";	chr22	46292203	46292328	exon	assembly	+	gene_id "ENSG00000075234.16"; ID "791083"; transcript_id "transcript46484.chr22.nic"; exon "14"; exon_id "chr22.14108"; pos "mid"	17.4165	0	0	0
chr22	46333167	46333725	+	repeat_id "MER4A,chr22,46333167,46333725";repeat_class "LTR";repeat_family "ERV1";	chr22	46333082	46333699	exon	assembly	+	gene_id "ENSG00000100416.12"; ID "791156"; transcript_id "ENST00000476901.1"; exon "2"; exon_id "chr22.14153"; pos "last"	0	0	40.8891	70.9891
chr22	50755470	50757323	-	repeat_id "L1PA4,chr22,50755470,50757323";repeat_class "LINE";repeat_family "L1";	chr22	50756948	50757326	exon	assembly	+	gene_id "ENSG00000184319.15"; ID "792811"; transcript_id "ENST00000496652.5"; exon "1"; exon_id "chr22.15616"; pos "first"	0	0	0	0
chr3	4316073	4317322	+	repeat_id "HSMAR1,chr3,4316073,4317322";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr3	4316212	4317265	exon	assembly	+	gene_id "ENSG00000170364.12"; ID "142051"; transcript_id "ENST00000425046.1"; exon "3"; exon_id "chr3.346"; pos "last"	38.9306	33.0557	0	0
chr3	9355740	9356116	-	repeat_id "MSTD,chr3,9355740,9356116";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	9355801	9355859	exon	assembly	-	gene_id "ENSG00000254485.5"; ID "142663"; transcript_id "ENST00000517846.1"; exon "2"; exon_id "chr3.1022"; pos "mid"	0	37.6323	0	0
chr3	9387934	9388164	+	repeat_id "AluSx,chr3,9387934,9388164";repeat_class "SINE";repeat_family "Alu";	chr3	9388087	9388127	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142690"; transcript_id "transcript2165.chr3.nic"; exon "3"; exon_id "chr3.1033"; pos "mid"	0	0	41.9942	0
chr3	9387934	9388164	+	repeat_id "AluSx,chr3,9387934,9388164";repeat_class "SINE";repeat_family "Alu";	chr3	9388087	9388127	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142720"; transcript_id "ENST00000521609.5"; exon "4"; exon_id "chr3.1033"; pos "mid"	0	0	41.9942	0
chr3	9389818	9390441	-	repeat_id "Charlie1,chr3,9389818,9390441";repeat_class "DNA";repeat_family "hAT-Charlie";	chr3	9389915	9390497	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142728"; transcript_id "ENST00000522221.1"; exon "2"; exon_id "chr3.1058"; pos "last"	0	0	0	0
chr3	9389818	9390441	-	repeat_id "Charlie1,chr3,9389818,9390441";repeat_class "DNA";repeat_family "hAT-Charlie";	chr3	9390014	9390497	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142696"; transcript_id "transcript2199.chr3.nic"; exon "4"; exon_id "chr3.1041"; pos "last"	0	0	0	0
chr3	9391558	9391833	-	repeat_id "Tigger1,chr3,9391558,9391833";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr3	9391679	9391826	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142724"; transcript_id "ENST00000522525.5"; exon "2"; exon_id "chr3.1031"; pos "mid"	59.9329	37.6327	0	136.063
chr3	9391558	9391833	-	repeat_id "Tigger1,chr3,9391558,9391833";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr3	9391705	9391826	exon	assembly	-	gene_id "ENSG00000206573.8"; ID "142695"; transcript_id "transcript2199.chr3.nic"; exon "3"; exon_id "chr3.1040"; pos "mid"	59.9329	37.6327	0	136.063
chr3	9948074	9948210	+	repeat_id "MIRb,chr3,9948074,9948210";repeat_class "SINE";repeat_family "MIR";	chr3	9948067	9948180	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143601"; transcript_id "transcript4714.chr3.nnic"; exon "2"; exon_id "chr3.1709"; pos "mid"	0	0	0	0
chr3	9948074	9948210	+	repeat_id "MIRb,chr3,9948074,9948210";repeat_class "SINE";repeat_family "MIR";	chr3	9948067	9948180	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143616"; transcript_id "ENST00000431558.1"; exon "2"; exon_id "chr3.1709"; pos "mid"	0	0	0	0
chr3	9948330	9948507	-	repeat_id "AluJb,chr3,9948330,9948507";repeat_class "SINE";repeat_family "Alu";	chr3	9948355	9948469	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143602"; transcript_id "transcript4714.chr3.nnic"; exon "3"; exon_id "chr3.1710"; pos "mid"	0	17.7992	0	33.5226
chr3	9948330	9948507	-	repeat_id "AluJb,chr3,9948330,9948507";repeat_class "SINE";repeat_family "Alu";	chr3	9948355	9948469	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143617"; transcript_id "ENST00000431558.1"; exon "3"; exon_id "chr3.1710"; pos "mid"	0	17.7992	0	33.5226
chr3	9954439	9954920	-	repeat_id "L3,chr3,9954439,9954920";repeat_class "LINE";repeat_family "CR1";	chr3	9954604	9954787	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143603"; transcript_id "transcript4714.chr3.nnic"; exon "4"; exon_id "chr3.1714"; pos "last"	0	0	0	0
chr3	9954439	9954920	-	repeat_id "L3,chr3,9954439,9954920";repeat_class "LINE";repeat_family "CR1";	chr3	9954604	9954787	exon	assembly	+	gene_id "ENSG00000230082.1"; ID "143618"; transcript_id "ENST00000431558.1"; exon "4"; exon_id "chr3.1714"; pos "last"	0	0	0	0
chr3	9981601	9981734	-	repeat_id "AluJo,chr3,9981601,9981734";repeat_class "SINE";repeat_family "Alu";	chr3	9981634	9981747	exon	assembly	-	gene_id "ENSG00000125037.12"; ID "143625"; transcript_id "transcript4494.chr3.nic"; exon "2"; exon_id "chr3.1719"; pos "mid"	0	0	0	0
chr3	11280834	11281167	-	repeat_id "L3,chr3,11280834,11281167";repeat_class "LINE";repeat_family "CR1";	chr3	11280994	11281102	exon	assembly	+	gene_id "ENSG00000197548.12"; ID "144262"; transcript_id "transcript7267.chr3.nnic"; exon "2"; exon_id "chr3.2257"; pos "mid"	18.9533	0	0	0
chr3	12562574	12563054	+	repeat_id "MER1A,chr3,12562574,12563054";repeat_class "DNA";repeat_family "hAT-Charlie";	chr3	12562838	12562894	exon	assembly	+	gene_id "ENSG00000075975.15"; ID "144907"; transcript_id "transcript9068.chr3.nnic"; exon "2"; exon_id "chr3.2643"; pos "mid"	0	0	79.5683	0
chr3	14945073	14946290	-	repeat_id "HSMAR1,chr3,14945073,14946290";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr3	14945024	14946154	exon	assembly	-	gene_id "ENSG00000225733.5"; ID "145576"; transcript_id "ENST00000440079.1"; exon "2"; exon_id "chr3.3348"; pos "last"	113.207	158.158	76.2526	35.4946
chr3	17561993	17562152	+	repeat_id "AluJb,chr3,17561993,17562152";repeat_class "SINE";repeat_family "Alu";	chr3	17562019	17562142	exon	assembly	-	gene_id "ENSG00000131374.14"; ID "146521"; transcript_id "transcript13670.chr3.nic"; exon "3"; exon_id "chr3.4088"; pos "mid"	0	0	0	36.4805
chr3	19888926	19889365	+	repeat_id "HERVL40-int,chr3,19888926,19889365";repeat_class "LTR";repeat_family "ERVL";	chr3	19889161	19889235	exon	assembly	-	gene_id "ENSG00000163576.17"; ID "146772"; transcript_id "transcript14166.chr3.nnic"; exon "1"; exon_id "chr3.4443"; pos "first"	0	0	0	0
chr3	21563026	21563388	+	repeat_id "MLT1A0,chr3,21563026,21563388";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	21563262	21563312	exon	assembly	-	gene_id "ENSG00000151789.10"; ID "147021"; transcript_id "transcript15010.chr3.nic"; exon "4"; exon_id "chr3.4638"; pos "mid"	0	0	0	0
chr3	29274247	29274617	-	repeat_id "MLT1A0,chr3,29274247,29274617";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	29274323	29274429	exon	assembly	-	gene_id "ENSG00000235904.2"; ID "147962"; transcript_id "transcript18669.chr3.nnic"; exon "2"; exon_id "chr3.5557"; pos "mid"	0	0	0	0
chr3	38356819	38357204	+	repeat_id "MLT1B,chr3,38356819,38357204";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	38357014	38357155	exon	assembly	+	gene_id "ENSG00000093217.9"; ID "150720"; transcript_id "transcript25394.chr3.nnic"; exon "3"; exon_id "chr3.7547"; pos "last"	0	0	0	0
chr3	38499634	38499765	-	repeat_id "FLAM_A,chr3,38499634,38499765";repeat_class "SINE";repeat_family "Alu";	chr3	38499681	38499747	exon	assembly	+	gene_id "ENSG00000157036.12"; ID "150802"; transcript_id "ENST00000457367.5"; exon "4"; exon_id "chr3.7604"; pos "mid"	0	0	0	0
chr3	38500002	38500359	+	repeat_id "L1MEd,chr3,38500002,38500359";repeat_class "LINE";repeat_family "L1";	chr3	38500090	38500164	exon	assembly	+	gene_id "ENSG00000157036.12"; ID "150803"; transcript_id "ENST00000457367.5"; exon "5"; exon_id "chr3.7588"; pos "mid"	68.1289	35.0899	41.9942	0
chr3	39154494	39154677	+	repeat_id "L2d2,chr3,39154494,39154677";repeat_class "LINE";repeat_family "L2";	chr3	39154576	39154688	exon	assembly	-	gene_id "ENSG00000144655.14"; ID "150977"; transcript_id "transcript25863.chr3.nnic"; exon "1"; exon_id "chr3.7950"; pos "first"	0	0	0	0
chr3	40538524	40539620	+	repeat_id "Tigger1,chr3,40538524,40539620";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr3	40538400	40539551	exon	assembly	+	gene_id "ENSG00000172888.11"; ID "151321"; transcript_id "transcript27147.chr3.nnic"; exon "6"; exon_id "chr3.8241"; pos "last"	36.3694	18.8163	0	35.4946
chr3	41882165	41882376	-	repeat_id "L2a,chr3,41882165,41882376";repeat_class "LINE";repeat_family "L2";	chr3	41882150	41882280	exon	assembly	-	gene_id "ENSG00000168038.10"; ID "151538"; transcript_id "transcript27767.chr3.nic"; exon "18"; exon_id "chr3.8395"; pos "last"	0	0	0	0
chr3	44458089	44458378	+	repeat_id "AluSc,chr3,44458089,44458378";repeat_class "SINE";repeat_family "Alu";	chr3	44458244	44458364	exon	assembly	-	gene_id "ENSG00000185219.16"; ID "152634"; transcript_id "ENST00000396077.7"; exon "2"; exon_id "chr3.9332"; pos "mid"	6.65925	0	0	0
chr3	47805335	47805427	-	repeat_id "UCON70,chr3,47805335,47805427";repeat_class "Unknown";repeat_family "Unknown";	chr3	47805326	47805420	exon	assembly	+	gene_id "ENSG00000132153.14"; ID "154782"; transcript_id "transcript35475.chr3.nnic"; exon "2"; exon_id "chr3.10961"; pos "mid"	0	0	0	0
chr3	47805335	47805427	-	repeat_id "UCON70,chr3,47805335,47805427";repeat_class "Unknown";repeat_family "Unknown";	chr3	47805326	47805420	exon	assembly	+	gene_id "ENSG00000132153.14"; ID "154787"; transcript_id "ENST00000445061.5"; exon "2"; exon_id "chr3.10961"; pos "mid"	0	0	0	0
chr3	47805335	47805427	-	repeat_id "UCON70,chr3,47805335,47805427";repeat_class "Unknown";repeat_family "Unknown";	chr3	47805326	47805420	exon	assembly	+	gene_id "ENSG00000132153.14"; ID "154815"; transcript_id "ENST00000395745.6"; exon "2"; exon_id "chr3.10961"; pos "mid"	0	0	0	0
chr3	47817998	47818140	-	repeat_id "LFSINE_Vert,chr3,47817998,47818140";repeat_class "SINE";repeat_family "tRNA";	chr3	47818022	47818117	exon	assembly	+	gene_id "ENSG00000132153.14"; ID "154789"; transcript_id "ENST00000445061.5"; exon "4"; exon_id "chr3.10966"; pos "mid"	23.0513	0	0	0
chr3	47817998	47818140	-	repeat_id "LFSINE_Vert,chr3,47817998,47818140";repeat_class "SINE";repeat_family "tRNA";	chr3	47818022	47818117	exon	assembly	+	gene_id "ENSG00000132153.14"; ID "154817"; transcript_id "ENST00000395745.6"; exon "4"; exon_id "chr3.10966"; pos "mid"	23.0513	0	0	0
chr3	48924716	48924993	-	repeat_id "AluSc8,chr3,48924716,48924993";repeat_class "SINE";repeat_family "Alu";	chr3	48924718	48924839	exon	assembly	+	gene_id "ENSG00000177479.19"; ID "156074"; transcript_id "transcript40976.chr3.nic"; exon "3"; exon_id "chr3.12057"; pos "mid"	0	14.2394	18.7869	0
chr3	48924716	48924993	-	repeat_id "AluSc8,chr3,48924716,48924993";repeat_class "SINE";repeat_family "Alu";	chr3	48924718	48924839	exon	assembly	+	gene_id "ENSG00000177479.19"; ID "156087"; transcript_id "ENST00000449376.5"; exon "3"; exon_id "chr3.12057"; pos "mid"	0	14.2394	18.7869	0
chr3	52704709	52704996	+	repeat_id "L2b,chr3,52704709,52704996";repeat_class "LINE";repeat_family "L2";	chr3	52704724	52704952	exon	assembly	-	gene_id "ENSG00000016864.18"; ID "160423"; transcript_id "transcript51637.chr3.nic"; exon "2"; exon_id "chr3.15647"; pos "mid"	122.94	76.2822	0	134.091
chr3	52749552	52749857	+	repeat_id "AluSz,chr3,52749552,52749857";repeat_class "SINE";repeat_family "Alu";	chr3	52749692	52749829	exon	assembly	-	gene_id "ENSG00000114904.12"; ID "160546"; transcript_id "ENST00000233027.9"; exon "8"; exon_id "chr3.15885"; pos "mid"	0	10.6795	0	0
chr3	53237641	53237954	+	repeat_id "AluSc8,chr3,53237641,53237954";repeat_class "SINE";repeat_family "Alu";	chr3	53237797	53237820	exon	assembly	-	gene_id "ENSG00000163931.15"; ID "160914"; transcript_id "ENST00000423516.5"; exon "5"; exon_id "chr3.16252"; pos "mid"	0	0	0	0
chr3	54888996	54889708	-	repeat_id "L2b,chr3,54888996,54889708";repeat_class "LINE";repeat_family "L2";	chr3	54889092	54889341	exon	assembly	+	gene_id "ENSG00000157445.14"; ID "161204"; transcript_id "transcript54526.chr3.nnic"; exon "1"; exon_id "chr3.16601"; pos "first"	0	0	0	0
chr3	57600033	57600324	-	repeat_id "AluJb,chr3,57600033,57600324";repeat_class "SINE";repeat_family "Alu";	chr3	57600059	57600169	exon	assembly	+	gene_id "ENSG00000272146.5"; ID "161898"; transcript_id "ENST00000607782.1"; exon "2"; exon_id "chr3.17160"; pos "mid"	0	0	0	0
chr3	62317773	62318136	-	repeat_id "L2a,chr3,62317773,62318136";repeat_class "LINE";repeat_family "L2";	chr3	62317808	62317900	exon	assembly	-	gene_id "ENSG00000241472.6"; ID "163568"; transcript_id "transcript59237.chr3.nnic"; exon "2"; exon_id "chr3.18157"; pos "mid"	35.8571	0	0	19.7192
chr3	62317773	62318136	-	repeat_id "L2a,chr3,62317773,62318136";repeat_class "LINE";repeat_family "L2";	chr3	62317808	62317900	exon	assembly	-	gene_id "ENSG00000241472.6"; ID "163573"; transcript_id "transcript59238.chr3.nnic"; exon "2"; exon_id "chr3.18157"; pos "mid"	35.8571	0	0	19.7192
chr3	75731759	75732398	+	repeat_id "L1MCa,chr3,75731759,75732398";repeat_class "LINE";repeat_family "L1";	chr3	75732060	75732121	exon	assembly	-	gene_id "ENSG00000227124.8"; ID "165847"; transcript_id "ENST00000477374.5"; exon "5"; exon_id "chr3.20051"; pos "mid"	0	0	0	0
chr3	90045286	90045698	-	repeat_id "MLT2D,chr3,90045286,90045698";repeat_class "LTR";repeat_family "ERVL";	chr3	90045368	90045528	exon	assembly	-	gene_id "novel_gene_chr3_66188"; ID "166328"; transcript_id "transcript66190.chr3.nnic"; exon "4"; exon_id "chr3.20622"; pos "mid"	0	0	0	0
chr3	90092660	90092742	-	repeat_id "L2c,chr3,90092660,90092742";repeat_class "LINE";repeat_family "L2";	chr3	90092703	90092750	exon	assembly	-	gene_id "novel_gene_chr3_66188"; ID "166327"; transcript_id "transcript66190.chr3.nnic"; exon "3"; exon_id "chr3.20620"; pos "mid"	0	0	0	0
chr3	98506432	98506942	-	repeat_id "MLT1G3,chr3,98506432,98506942";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	98506474	98506747	exon	assembly	-	gene_id "ENSG00000080822.16"; ID "166769"; transcript_id "transcript67324.chr3.nnic"; exon "5"; exon_id "chr3.21038"; pos "last"	0	0	0	0
chr3	98982456	98982586	-	repeat_id "MIR3,chr3,98982456,98982586";repeat_class "SINE";repeat_family "MIR";	chr3	98982464	98982534	exon	assembly	+	gene_id "ENSG00000240476.1"; ID "166978"; transcript_id "transcript68030.chr3.nnic"; exon "2"; exon_id "chr3.21258"; pos "mid"	0	0	0	0
chr3	101686977	101687270	-	repeat_id "AluSp,chr3,101686977,101687270";repeat_class "SINE";repeat_family "Alu";	chr3	101686917	101687271	exon	assembly	-	gene_id "ENSG00000114391.12"; ID "167905"; transcript_id "transcript71516.chr3.nnic"; exon "1"; exon_id "chr3.21857"; pos "first"	0	0	0	0
chr3	101782623	101782947	-	repeat_id "AluJr,chr3,101782623,101782947";repeat_class "SINE";repeat_family "Alu";	chr3	101782660	101782780	exon	assembly	+	gene_id "ENSG00000144815.15"; ID "168048"; transcript_id "ENST00000491511.6"; exon "3"; exon_id "chr3.21929"; pos "mid"	61.4694	36.6156	0	0
chr3	107129810	107130007	-	repeat_id "MLT1A1,chr3,107129810,107130007";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	107129888	107129992	exon	assembly	-	gene_id "ENSG00000242759.6"; ID "168502"; transcript_id "ENST00000607801.5"; exon "2"; exon_id "chr3.22188"; pos "mid"	0	0	0	0
chr3	107129810	107130007	-	repeat_id "MLT1A1,chr3,107129810,107130007";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	107129888	107129992	exon	assembly	-	gene_id "ENSG00000242759.6"; ID "168511"; transcript_id "ENST00000479612.6"; exon "2"; exon_id "chr3.22188"; pos "mid"	0	0	0	0
chr3	107248488	107248968	+	repeat_id "MLT2B2,chr3,107248488,107248968";repeat_class "LTR";repeat_family "ERVL";	chr3	107248578	107248897	exon	assembly	+	gene_id "ENSG00000243701.5"; ID "168537"; transcript_id "transcript72791.chr3.nnic"; exon "3"; exon_id "chr3.22204"; pos "last"	0	0	0	0
chr3	111778110	111778500	+	repeat_id "MLT1C,chr3,111778110,111778500";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	111778268	111778458	exon	assembly	+	gene_id "ENSG00000240891.7"; ID "169237"; transcript_id "ENST00000474484.1"; exon "2"; exon_id "chr3.22915"; pos "last"	0	0	0	0
chr3	119491773	119492057	+	repeat_id "AluSq2,chr3,119491773,119492057";repeat_class "SINE";repeat_family "Alu";	chr3	119491763	119492084	exon	assembly	+	gene_id "ENSG00000163389.10"; ID "170513"; transcript_id "transcript77439.chr3.nnic"; exon "11"; exon_id "chr3.24385"; pos "last"	0	0	0	0
chr3	121979402	121979753	+	repeat_id "THE1B,chr3,121979402,121979753";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	121979425	121979669	exon	assembly	+	gene_id "ENSG00000114013.15"; ID "171330"; transcript_id "transcript80610.chr3.nnic"; exon "1"; exon_id "chr3.25184"; pos "first"	0	0	36.4686	0
chr3	127615423	127615532	-	repeat_id "MIRb,chr3,127615423,127615532";repeat_class "SINE";repeat_family "MIR";	chr3	127615411	127615530	exon	assembly	+	gene_id "ENSG00000073111.13"; ID "173364"; transcript_id "transcript85170.chr3.nnic"; exon "1"; exon_id "chr3.27065"; pos "first"	0	0	0	0
chr3	133662958	133663361	+	repeat_id "MER31A,chr3,133662958,133663361";repeat_class "LTR";repeat_family "ERV1";	chr3	133662899	133663342	exon	assembly	+	gene_id "ENSG00000242337.5"; ID "176036"; transcript_id "transcript93535.chr3.nnic"; exon "2"; exon_id "chr3.29115"; pos "last"	0	0	0	0
chr3	136259185	136259468	+	repeat_id "AluSz6,chr3,136259185,136259468";repeat_class "SINE";repeat_family "Alu";	chr3	136259176	136259235	exon	assembly	+	gene_id "ENSG00000114054.13"; ID "176768"; transcript_id "ENST00000469217.5"; exon "4"; exon_id "chr3.29686"; pos "mid"	0	0	0	0
chr3	138188448	138188663	+	repeat_id "L3,chr3,138188448,138188663";repeat_class "LINE";repeat_family "CR1";	chr3	138188455	138188530	exon	assembly	+	gene_id "ENSG00000114098.17"; ID "177426"; transcript_id "ENST00000491704.5"; exon "2"; exon_id "chr3.30047"; pos "mid"	23.5633	15.2564	66.3069	30.5649
chr3	139344375	139344707	-	repeat_id "L2b,chr3,139344375,139344707";repeat_class "LINE";repeat_family "L2";	chr3	139344565	139344718	exon	assembly	+	gene_id "ENSG00000175110.11"; ID "178092"; transcript_id "ENST00000478464.5"; exon "1"; exon_id "chr3.30450"; pos "first"	33.8082	0	0	0
chr3	142053703	142054388	+	repeat_id "L1ME1,chr3,142053703,142054388";repeat_class "LINE";repeat_family "L1";	chr3	142054115	142054149	exon	assembly	-	gene_id "ENSG00000114126.17"; ID "178741"; transcript_id "ENST00000467072.5"; exon "4"; exon_id "chr3.31037"; pos "mid"	0	0	0	0
chr3	142201019	142201864	+	repeat_id "L1MD2,chr3,142201019,142201864";repeat_class "LINE";repeat_family "L1";	chr3	142201177	142201599	exon	assembly	-	gene_id "ENSG00000175066.15"; ID "178865"; transcript_id "transcript100712.chr3.nnic"; exon "5"; exon_id "chr3.31100"; pos "last"	0	0	0	0
chr3	148730158	148730294	-	repeat_id "MIRc,chr3,148730158,148730294";repeat_class "SINE";repeat_family "MIR";	chr3	148730180	148730237	exon	assembly	+	gene_id "ENSG00000144891.17"; ID "180001"; transcript_id "transcript103071.chr3.nic"; exon "3"; exon_id "chr3.31967"; pos "mid"	0	7.1197	0	0
chr3	148730158	148730294	-	repeat_id "MIRc,chr3,148730158,148730294";repeat_class "SINE";repeat_family "MIR";	chr3	148730180	148730237	exon	assembly	+	gene_id "ENSG00000144891.17"; ID "180013"; transcript_id "transcript103085.chr3.nic"; exon "3"; exon_id "chr3.31967"; pos "mid"	0	7.1197	0	0
chr3	148730158	148730294	-	repeat_id "MIRc,chr3,148730158,148730294";repeat_class "SINE";repeat_family "MIR";	chr3	148730180	148730237	exon	assembly	+	gene_id "ENSG00000144891.17"; ID "180030"; transcript_id "ENST00000475166.5"; exon "3"; exon_id "chr3.31967"; pos "mid"	0	7.1197	0	0
chr3	153881046	153881496	-	repeat_id "Tigger7,chr3,153881046,153881496";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr3	153881213	153881548	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181265"; transcript_id "transcript108456.chr3.nnic"; exon "1"; exon_id "chr3.33172"; pos "first"	0	0	0	0
chr3	153882136	153883120	-	repeat_id "L1MC3,chr3,153882136,153883120";repeat_class "LINE";repeat_family "L1";	chr3	153882357	153882412	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181249"; transcript_id "transcript108428.chr3.nic"; exon "2"; exon_id "chr3.33160"; pos "mid"	0	0	0	0
chr3	153882136	153883120	-	repeat_id "L1MC3,chr3,153882136,153883120";repeat_class "LINE";repeat_family "L1";	chr3	153882357	153882412	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181266"; transcript_id "transcript108456.chr3.nnic"; exon "2"; exon_id "chr3.33160"; pos "mid"	0	0	0	0
chr3	153882136	153883120	-	repeat_id "L1MC3,chr3,153882136,153883120";repeat_class "LINE";repeat_family "L1";	chr3	153882357	153882412	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181271"; transcript_id "transcript108458.chr3.nnic"; exon "2"; exon_id "chr3.33160"; pos "mid"	0	0	0	0
chr3	153882136	153883120	-	repeat_id "L1MC3,chr3,153882136,153883120";repeat_class "LINE";repeat_family "L1";	chr3	153882357	153882412	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181276"; transcript_id "transcript108468.chr3.nnic"; exon "2"; exon_id "chr3.33160"; pos "mid"	0	0	0	0
chr3	153920068	153920485	+	repeat_id "MSTB1,chr3,153920068,153920485";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	153920351	153920415	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181250"; transcript_id "transcript108428.chr3.nic"; exon "3"; exon_id "chr3.33162"; pos "mid"	16.9043	0	0	0
chr3	153920068	153920485	+	repeat_id "MSTB1,chr3,153920068,153920485";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	153920351	153920415	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181267"; transcript_id "transcript108456.chr3.nnic"; exon "3"; exon_id "chr3.33162"; pos "mid"	16.9043	0	0	0
chr3	153920068	153920485	+	repeat_id "MSTB1,chr3,153920068,153920485";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	153920351	153920415	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181272"; transcript_id "transcript108458.chr3.nnic"; exon "3"; exon_id "chr3.33162"; pos "mid"	16.9043	0	0	0
chr3	153920068	153920485	+	repeat_id "MSTB1,chr3,153920068,153920485";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	153920351	153920415	exon	assembly	+	gene_id "ENSG00000243486.1"; ID "181277"; transcript_id "transcript108468.chr3.nnic"; exon "3"; exon_id "chr3.33162"; pos "mid"	16.9043	0	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181491"; transcript_id "ENST00000492661.5"; exon "3"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181534"; transcript_id "ENST00000382989.7"; exon "3"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181539"; transcript_id "ENST00000460393.5"; exon "3"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181563"; transcript_id "ENST00000462745.5"; exon "3"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181587"; transcript_id "ENST00000493237.5"; exon "3"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155085056	155085093	-	repeat_id "L2,chr3,155085056,155085093";repeat_class "LINE";repeat_family "L2";	chr3	155085059	155085094	exon	assembly	+	gene_id "ENSG00000196549.10"; ID "181643"; transcript_id "ENST00000615825.1"; exon "2"; exon_id "chr3.33319"; pos "mid"	0	11.1881	0	0
chr3	155803895	155804195	+	repeat_id "AluSq2,chr3,155803895,155804195";repeat_class "SINE";repeat_family "Alu";	chr3	155804051	155804173	exon	assembly	-	gene_id "ENSG00000174928.15"; ID "181711"; transcript_id "transcript109636.chr3.nnic"; exon "2"; exon_id "chr3.33433"; pos "mid"	0	0	0	0
chr3	160391392	160391679	+	repeat_id "AluSc8,chr3,160391392,160391679";repeat_class "SINE";repeat_family "Alu";	chr3	160391546	160391643	exon	assembly	-	gene_id "ENSG00000068885.14"; ID "182873"; transcript_id "ENST00000487943.5"; exon "2"; exon_id "chr3.34367"; pos "mid"	0	3.55985	0	0
chr3	161359805	161359958	+	repeat_id "MIR3,chr3,161359805,161359958";repeat_class "SINE";repeat_family "MIR";	chr3	161359802	161359894	exon	assembly	-	gene_id "ENSG00000196542.8"; ID "183311"; transcript_id "ENST00000359175.8"; exon "2"; exon_id "chr3.34683"; pos "mid"	0	0	0	0
chr3	165460160	165460711	+	repeat_id "MLT2B4,chr3,165460160,165460711";repeat_class "LTR";repeat_family "ERVL";	chr3	165460539	165460632	exon	assembly	+	gene_id "ENSG00000244128.5"; ID "183348"; transcript_id "transcript114516.chr3.nnic"; exon "2"; exon_id "chr3.34818"; pos "mid"	180.823	35.0899	182.343	0
chr3	171346461	171347182	-	repeat_id "L2b,chr3,171346461,171347182";repeat_class "LINE";repeat_family "L2";	chr3	171346934	171347218	exon	assembly	-	gene_id "ENSG00000154310.16"; ID "184387"; transcript_id "ENST00000465393.1"; exon "3"; exon_id "chr3.35750"; pos "last"	0	0	0	0
chr3	179332960	179333116	-	repeat_id "MIR1_Amn,chr3,179332960,179333116";repeat_class "SINE";repeat_family "MIR";	chr3	179332989	179333123	exon	assembly	+	gene_id "ENSG00000121864.9"; ID "185638"; transcript_id "ENST00000496856.5"; exon "5"; exon_id "chr3.36688"; pos "mid"	0	0	0	0
chr3	179332960	179333116	-	repeat_id "MIR1_Amn,chr3,179332960,179333116";repeat_class "SINE";repeat_family "MIR";	chr3	179332989	179333123	exon	assembly	+	gene_id "ENSG00000121864.9"; ID "185664"; transcript_id "ENST00000484866.5"; exon "4"; exon_id "chr3.36688"; pos "mid"	0	0	0	0
chr3	190556086	190556235	-	repeat_id "L1ME3,chr3,190556086,190556235";repeat_class "LINE";repeat_family "L1";	chr3	190556130	190556216	exon	assembly	+	gene_id "ENSG00000196083.9"; ID "189908"; transcript_id "ENST00000447382.5"; exon "2"; exon_id "chr3.40555"; pos "mid"	0	0	39.7841	37.4665
chr3	190556086	190556235	-	repeat_id "L1ME3,chr3,190556086,190556235";repeat_class "LINE";repeat_family "L1";	chr3	190556130	190556216	exon	assembly	+	gene_id "ENSG00000196083.9"; ID "189921"; transcript_id "ENST00000422485.5"; exon "2"; exon_id "chr3.40555"; pos "mid"	0	0	39.7841	37.4665
chr3	191360824	191361010	+	repeat_id "MIRb,chr3,191360824,191361010";repeat_class "SINE";repeat_family "MIR";	chr3	191360844	191360980	exon	assembly	+	gene_id "ENSG00000152492.13"; ID "190047"; transcript_id "transcript132300.chr3.nnic"; exon "1"; exon_id "chr3.40649"; pos "first"	0	18.3078	0	0
chr3	194589004	194589298	-	repeat_id "AluJo,chr3,194589004,194589298";repeat_class "SINE";repeat_family "Alu";	chr3	194589021	194589142	exon	assembly	+	gene_id "ENSG00000231770.5"; ID "190401"; transcript_id "transcript133191.chr3.nnic"; exon "2"; exon_id "chr3.41184"; pos "mid"	0	0	0	0
chr3	196496170	196496539	-	repeat_id "MLT1C2,chr3,196496170,196496539";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr3	196496214	196496471	exon	assembly	-	gene_id "ENSG00000163961.4"; ID "191419"; transcript_id "transcript136514.chr3.nnic"; exon "3"; exon_id "chr3.42312"; pos "last"	18.441	72.7223	0	68.0312
chr3	196499826	196500645	+	repeat_id "L1MB3,chr3,196499826,196500645";repeat_class "LINE";repeat_family "L1";	chr3	196500434	196500615	exon	assembly	-	gene_id "ENSG00000163961.4"; ID "191418"; transcript_id "transcript136514.chr3.nnic"; exon "2"; exon_id "chr3.42311"; pos "mid"	0	35.0899	0	142.965
chr3	196500718	196501010	-	repeat_id "AluY,chr3,196500718,196501010";repeat_class "SINE";repeat_family "Alu";	chr3	196500713	196500794	exon	assembly	-	gene_id "ENSG00000163961.4"; ID "191417"; transcript_id "transcript136514.chr3.nnic"; exon "1"; exon_id "chr3.42310"; pos "first"	0	0	0	0
chr3	197126195	197126479	+	repeat_id "AluSp,chr3,197126195,197126479";repeat_class "SINE";repeat_family "Alu";	chr3	197126134	197126464	exon	assembly	-	gene_id "ENSG00000075711.20"; ID "191964"; transcript_id "transcript138455.chr3.nnic"; exon "12"; exon_id "chr3.42622"; pos "last"	0	0	0	0
chr3	197614453	197615925	-	repeat_id "MER4-int,chr3,197614453,197615925";repeat_class "LTR";repeat_family "ERV1";	chr3	197615564	197615685	exon	assembly	-	gene_id "ENSG00000214135.8"; ID "192332"; transcript_id "ENST00000418868.5"; exon "7"; exon_id "chr3.42837"; pos "mid"	127.549	70.6881	40.8891	65.0737
chr3	197953520	197953867	+	repeat_id "L2a,chr3,197953520,197953867";repeat_class "LINE";repeat_family "L2";	chr3	197953488	197953660	exon	assembly	+	gene_id "ENSG00000182899.14"; ID "192742"; transcript_id "ENST00000439255.1"; exon "3"; exon_id "chr3.43094"; pos "mid"	0	18.3078	0	103.526
chr4	265994	266287	+	repeat_id "AluSc,chr4,265994,266287";repeat_class "SINE";repeat_family "Alu";	chr4	266164	266262	exon	assembly	-	gene_id "ENSG00000186777.11"; ID "192988"; transcript_id "transcript335.chr4.nnic"; exon "4"; exon_id "chr4.40"; pos "mid"	0	16.7821	0	0
chr4	456051	456369	-	repeat_id "AluSx,chr4,456051,456369";repeat_class "SINE";repeat_family "Alu";	chr4	456049	456368	exon	assembly	-	gene_id "ENSG00000251595.7"; ID "193083"; transcript_id "transcript1144.chr4.nnic"; exon "3"; exon_id "chr4.81"; pos "last"	0	0	0	0
chr4	467482	467854	+	repeat_id "L1MA9,chr4,467482,467854";repeat_class "LINE";repeat_family "L1";	chr4	467617	467681	exon	assembly	-	gene_id "ENSG00000251595.7"; ID "193078"; transcript_id "transcript729.chr4.nnic"; exon "3"; exon_id "chr4.79"; pos "mid"	0	19.3249	0	0
chr4	497012	497422	-	repeat_id "PRIMA4-int,chr4,497012,497422";repeat_class "LTR";repeat_family "ERV1";	chr4	497127	497286	exon	assembly	-	gene_id "ENSG00000182903.15"; ID "193107"; transcript_id "transcript1180.chr4.nnic"; exon "2"; exon_id "chr4.90"; pos "mid"	20.49	0	0	0
chr4	1241258	1241523	-	repeat_id "X9_LINE,chr4,1241258,1241523";repeat_class "LINE";repeat_family "L1";	chr4	1241325	1241519	exon	assembly	-	gene_id "ENSG00000159692.15"; ID "193775"; transcript_id "transcript2384.chr4.nic"; exon "2"; exon_id "chr4.812"; pos "mid"	575.765	462.269	266.332	136.063
chr4	1241258	1241523	-	repeat_id "X9_LINE,chr4,1241258,1241523";repeat_class "LINE";repeat_family "L1";	chr4	1241325	1241519	exon	assembly	-	gene_id "ENSG00000159692.15"; ID "193786"; transcript_id "ENST00000382952.7"; exon "2"; exon_id "chr4.812"; pos "mid"	575.765	462.269	266.332	136.063
chr4	1299178	1299903	+	repeat_id "L2a,chr4,1299178,1299903";repeat_class "LINE";repeat_family "L2";	chr4	1299530	1299969	exon	assembly	+	gene_id "ENSG00000090316.15"; ID "193843"; transcript_id "transcript2688.chr4.nic"; exon "3"; exon_id "chr4.894"; pos "last"	0	0	0	0
chr4	1730336	1730542	-	repeat_id "LTR13,chr4,1730336,1730542";repeat_class "LTR";repeat_family "ERVK";	chr4	1730388	1730388	exon	assembly	+	gene_id "ENSG00000013810.18"; ID "194051"; transcript_id "ENST00000612220.4"; exon "4"; exon_id "chr4.1079"; pos "mid"	0	0	0	0
chr4	2470963	2471266	-	repeat_id "AluSz,chr4,2470963,2471266";repeat_class "SINE";repeat_family "Alu";	chr4	2470987	2471109	exon	assembly	+	gene_id "ENSG00000063978.15"; ID "194614"; transcript_id "transcript4256.chr4.nic"; exon "2"; exon_id "chr4.1540"; pos "mid"	0	0	18.7869	0
chr4	4269024	4269689	+	repeat_id "L1MD1,chr4,4269024,4269689";repeat_class "LINE";repeat_family "L1";	chr4	4269145	4269245	exon	assembly	-	gene_id "ENSG00000145220.13"; ID "195753"; transcript_id "transcript6494.chr4.nnic"; exon "1"; exon_id "chr4.2465"; pos "first"	0	0	0	0
chr4	4286372	4286646	+	repeat_id "EutTc1-N2,chr4,4286372,4286646";repeat_class "DNA";repeat_family "TcMar-Tc1";	chr4	4286519	4286572	exon	assembly	-	gene_id "ENSG00000145220.13"; ID "195743"; transcript_id "ENST00000343470.8"; exon "2"; exon_id "chr4.2456"; pos "mid"	86.5697	24.9187	50.8353	0
chr4	4286372	4286646	+	repeat_id "EutTc1-N2,chr4,4286372,4286646";repeat_class "DNA";repeat_family "TcMar-Tc1";	chr4	4286519	4286572	exon	assembly	-	gene_id "ENSG00000145220.13"; ID "195758"; transcript_id "ENST00000452476.5"; exon "2"; exon_id "chr4.2456"; pos "mid"	86.5697	24.9187	50.8353	0
chr4	11434304	11434687	-	repeat_id "L1PA10,chr4,11434304,11434687";repeat_class "LINE";repeat_family "L1";	chr4	11434321	11434415	exon	assembly	+	gene_id "novel_gene_chr4_10057"; ID "197411"; transcript_id "transcript10056.chr4.nnic"; exon "3"; exon_id "chr4.3964"; pos "mid"	0	0	0	0
chr4	15672321	15673159	-	repeat_id "Tigger3b,chr4,15672321,15673159";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr4	15672608	15672676	exon	assembly	-	gene_id "ENSG00000118564.14"; ID "197878"; transcript_id "transcript11621.chr4.nnic"; exon "2"; exon_id "chr4.4366"; pos "mid"	57.8839	17.2907	92.8297	0
chr4	15673160	15673459	+	repeat_id "AluJb,chr4,15673160,15673459";repeat_class "SINE";repeat_family "Alu";	chr4	15673182	15673272	exon	assembly	-	gene_id "ENSG00000118564.14"; ID "197882"; transcript_id "transcript11623.chr4.nnic"; exon "2"; exon_id "chr4.4369"; pos "mid"	0	0	0	0
chr4	15680389	15680693	+	repeat_id "AluSx1,chr4,15680389,15680693";repeat_class "SINE";repeat_family "Alu";	chr4	15680497	15680672	exon	assembly	-	gene_id "ENSG00000118564.14"; ID "197874"; transcript_id "transcript11616.chr4.nnic"; exon "2"; exon_id "chr4.4363"; pos "mid"	0	0	0	0
chr4	15686499	15689085	+	repeat_id "Charlie9,chr4,15686499,15689085";repeat_class "DNA";repeat_family "hAT-Charlie";	chr4	15687001	15687148	exon	assembly	+	gene_id "ENSG00000109743.10"; ID "198018"; transcript_id "transcript11935.chr4.nnic"; exon "3"; exon_id "chr4.4412"; pos "mid"	0	0	37.5737	0
chr4	15686499	15689085	+	repeat_id "Charlie9,chr4,15686499,15689085";repeat_class "DNA";repeat_family "hAT-Charlie";	chr4	15688551	15688735	exon	assembly	+	gene_id "ENSG00000109743.10"; ID "198019"; transcript_id "transcript11935.chr4.nnic"; exon "4"; exon_id "chr4.4482"; pos "mid"	0	0	37.5737	0
chr4	15919825	15920606	+	repeat_id "MER50B,chr4,15919825,15920606";repeat_class "LTR";repeat_family "ERV1";	chr4	15920017	15920281	exon	assembly	+	gene_id "novel_gene_chr4_11973"; ID "198056"; transcript_id "transcript11972.chr4.nnic"; exon "3"; exon_id "chr4.4525"; pos "mid"	0	0	0	0
chr4	17628016	17628255	+	repeat_id "MER90,chr4,17628016,17628255";repeat_class "LTR";repeat_family "ERV1";	chr4	17628006	17628170	exon	assembly	+	gene_id "ENSG00000118579.12"; ID "198236"; transcript_id "ENST00000503945.2"; exon "6"; exon_id "chr4.4844"; pos "last"	0	0	0	0
chr4	25161176	25161752	+	repeat_id "LTR26,chr4,25161176,25161752";repeat_class "LTR";repeat_family "ERV1";	chr4	25161418	25161687	exon	assembly	+	gene_id "ENSG00000281501.1"; ID "199182"; transcript_id "ENST00000510415.1"; exon "2"; exon_id "chr4.5607"; pos "last"	0	0	0	0
chr4	27007961	27008080	+	repeat_id "LFSINE_Vert,chr4,27007961,27008080";repeat_class "SINE";repeat_family "tRNA";	chr4	27007983	27008006	exon	assembly	+	gene_id "ENSG00000109689.15"; ID "199717"; transcript_id "ENST00000465503.5"; exon "9"; exon_id "chr4.6040"; pos "mid"	0	0	0	0
chr4	39185703	39185800	+	repeat_id "OldhAT1,chr4,39185703,39185800";repeat_class "DNA";repeat_family "hAT-Ac";	chr4	39185726	39185817	exon	assembly	+	gene_id "ENSG00000157796.17"; ID "200450"; transcript_id "ENST00000399820.7"; exon "2"; exon_id "chr4.6722"; pos "mid"	15.3673	0	0	0
chr4	39355722	39356018	+	repeat_id "AluSc,chr4,39355722,39356018";repeat_class "SINE";repeat_family "Alu";	chr4	39355877	39355997	exon	assembly	-	gene_id "ENSG00000035928.15"; ID "200629"; transcript_id "ENST00000418436.5"; exon "2"; exon_id "chr4.6807"; pos "mid"	0	0	0	0
chr4	44957850	44962714	-	repeat_id "L1PA15-16,chr4,44957850,44962714";repeat_class "LINE";repeat_family "L1";	chr4	44961433	44961711	exon	assembly	+	gene_id "novel_gene_chr4_23251"; ID "201993"; transcript_id "transcript23250.chr4.nnic"; exon "1"; exon_id "chr4.7979"; pos "first"	63.0063	0	0	0
chr4	44957850	44962714	-	repeat_id "L1PA15-16,chr4,44957850,44962714";repeat_class "LINE";repeat_family "L1";	chr4	44962398	44962464	exon	assembly	+	gene_id "novel_gene_chr4_23251"; ID "201994"; transcript_id "transcript23250.chr4.nnic"; exon "2"; exon_id "chr4.7980"; pos "mid"	63.0063	0	0	0
chr4	44985003	44985664	+	repeat_id "LTR26,chr4,44985003,44985664";repeat_class "LTR";repeat_family "ERV1";	chr4	44985250	44985600	exon	assembly	+	gene_id "novel_gene_chr4_23251"; ID "201995"; transcript_id "transcript23250.chr4.nnic"; exon "3"; exon_id "chr4.7981"; pos "last"	16.9043	0	36.4686	0
chr4	52750674	52750824	-	repeat_id "MER74B,chr4,52750674,52750824";repeat_class "LTR";repeat_family "ERVL";	chr4	52750710	52750829	exon	assembly	-	gene_id "ENSG00000226887.7"; ID "203178"; transcript_id "ENST00000440542.1"; exon "3"; exon_id "chr4.8957"; pos "mid"	0	0	19.892	0
chr4	55351072	55351371	-	repeat_id "AluSq2,chr4,55351072,55351371";repeat_class "SINE";repeat_family "Alu";	chr4	55351097	55351214	exon	assembly	+	gene_id "ENSG00000128039.10"; ID "203636"; transcript_id "transcript27295.chr4.nnic"; exon "2"; exon_id "chr4.9327"; pos "mid"	0	0	0	0
chr4	56446135	56446509	-	repeat_id "L1MB4,chr4,56446135,56446509";repeat_class "LINE";repeat_family "L1";	chr4	56446357	56446377	exon	assembly	+	gene_id "ENSG00000128050.8"; ID "204248"; transcript_id "ENST00000399688.7"; exon "3"; exon_id "chr4.9728"; pos "mid"	0	37.6323	0	0
chr4	67729870	67730216	+	repeat_id "MLT1A,chr4,67729870,67730216";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr4	67730074	67730198	exon	assembly	+	gene_id "ENSG00000248049.6"; ID "204932"; transcript_id "transcript30490.chr4.nnic"; exon "3"; exon_id "chr4.10379"; pos "last"	0	0	0	0
chr4	71028601	71028759	-	repeat_id "AluSz,chr4,71028601,71028759";repeat_class "SINE";repeat_family "Alu";	chr4	71028623	71028719	exon	assembly	+	gene_id "ENSG00000156136.9"; ID "205475"; transcript_id "ENST00000504952.1"; exon "7"; exon_id "chr4.11168"; pos "mid"	0	0	0	0
chr4	74330198	74330453	+	repeat_id "AluJr,chr4,74330198,74330453";repeat_class "SINE";repeat_family "Alu";	chr4	74330198	74330304	exon	assembly	-	gene_id "novel_gene_chr4_33097"; ID "205911"; transcript_id "transcript33096.chr4.nnic"; exon "2"; exon_id "chr4.11658"; pos "mid"	0	0	0	0
chr4	77885260	77885334	+	repeat_id "X24_LINE,chr4,77885260,77885334";repeat_class "LINE";repeat_family "L2";	chr4	77885256	77885339	exon	assembly	+	gene_id "ENSG00000169288.17"; ID "207164"; transcript_id "ENST00000315567.12"; exon "4"; exon_id "chr4.12711"; pos "mid"	33.8082	16.7821	36.4686	0
chr4	77921929	77922975	-	repeat_id "L2a,chr4,77921929,77922975";repeat_class "LINE";repeat_family "L2";	chr4	77922026	77922062	exon	assembly	+	gene_id "ENSG00000169288.17"; ID "207171"; transcript_id "transcript37192.chr4.nnic"; exon "1"; exon_id "chr4.12717"; pos "first"	0	0	0	0
chr4	78571000	78571308	-	repeat_id "AluJr,chr4,78571000,78571308";repeat_class "SINE";repeat_family "Alu";	chr4	78571033	78571173	exon	assembly	+	gene_id "ENSG00000138772.12"; ID "207246"; transcript_id "ENST00000503570.6"; exon "3"; exon_id "chr4.12850"; pos "mid"	0	0	0	0
chr4	78574467	78575326	-	repeat_id "L1ME3C,chr4,78574467,78575326";repeat_class "LINE";repeat_family "L1";	chr4	78574854	78575189	exon	assembly	+	gene_id "ENSG00000138772.12"; ID "207215"; transcript_id "transcript37826.chr4.nnic"; exon "4"; exon_id "chr4.12835"; pos "last"	0	0	0	0
chr4	82893709	82894962	-	repeat_id "HSMAR2,chr4,82893709,82894962";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr4	82893545	82894847	exon	assembly	-	gene_id "ENSG00000251022.6"; ID "208447"; transcript_id "transcript41311.chr4.nic"; exon "6"; exon_id "chr4.13578"; pos "last"	335.521	168.838	204.446	243.533
chr4	82893709	82894962	-	repeat_id "HSMAR2,chr4,82893709,82894962";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr4	82893545	82894847	exon	assembly	-	gene_id "ENSG00000251022.6"; ID "208459"; transcript_id "transcript41426.chr4.nic"; exon "5"; exon_id "chr4.13578"; pos "last"	335.521	168.838	204.446	243.533
chr4	82893709	82894962	-	repeat_id "HSMAR2,chr4,82893709,82894962";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr4	82893545	82894847	exon	assembly	-	gene_id "ENSG00000251022.6"; ID "208465"; transcript_id "transcript41438.chr4.nnic"; exon "5"; exon_id "chr4.13578"; pos "last"	335.521	168.838	204.446	243.533
chr4	83064870	83065172	-	repeat_id "AluJb,chr4,83064870,83065172";repeat_class "SINE";repeat_family "Alu";	chr4	83065060	83065155	exon	assembly	+	gene_id "ENSG00000138663.8"; ID "208607"; transcript_id "ENST00000503682.5"; exon "8"; exon_id "chr4.13728"; pos "mid"	0	0	14.3664	0
chr4	84970518	84970957	+	repeat_id "Tigger2a,chr4,84970518,84970957";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr4	84970640	84970727	exon	assembly	+	gene_id "ENSG00000180769.8"; ID "209257"; transcript_id "transcript43322.chr4.nnic"; exon "3"; exon_id "chr4.14066"; pos "last"	0	0	0	0
chr4	85004086	85004404	+	repeat_id "MLT1A1,chr4,85004086,85004404";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr4	85004230	85004327	exon	assembly	+	gene_id "ENSG00000180769.8"; ID "209241"; transcript_id "transcript43259.chr4.nic"; exon "3"; exon_id "chr4.14058"; pos "mid"	0	0	0	0
chr4	88595553	88595664	+	repeat_id "MIR3,chr4,88595553,88595664";repeat_class "SINE";repeat_family "MIR";	chr4	88595557	88595614	exon	assembly	+	gene_id "ENSG00000138641.15"; ID "210291"; transcript_id "transcript45177.chr4.nnic"; exon "2"; exon_id "chr4.15276"; pos "mid"	16.3919	34.5813	0	0
chr4	88595553	88595664	+	repeat_id "MIR3,chr4,88595553,88595664";repeat_class "SINE";repeat_family "MIR";	chr4	88595557	88595614	exon	assembly	+	gene_id "ENSG00000138641.15"; ID "210356"; transcript_id "ENST00000402738.5"; exon "2"; exon_id "chr4.15276"; pos "mid"	16.3919	34.5813	0	0
chr4	89681261	89681677	+	repeat_id "MER61C,chr4,89681261,89681677";repeat_class "LTR";repeat_family "ERV1";	chr4	89681323	89681684	exon	assembly	+	gene_id "ENSG00000251095.6"; ID "210607"; transcript_id "transcript45846.chr4.nic"; exon "1"; exon_id "chr4.15457"; pos "first"	211.558	0	149.19	133.105
chr4	89681261	89681677	+	repeat_id "MER61C,chr4,89681261,89681677";repeat_class "LTR";repeat_family "ERV1";	chr4	89681512	89681684	exon	assembly	+	gene_id "ENSG00000251095.6"; ID "210611"; transcript_id "ENST00000513572.2"; exon "1"; exon_id "chr4.15465"; pos "first"	211.558	0	149.19	133.105
chr4	98408433	98409238	+	repeat_id "L1M5,chr4,98408433,98409238";repeat_class "LINE";repeat_family "L1";	chr4	98408863	98409071	exon	assembly	+	gene_id "ENSG00000138698.14"; ID "211099"; transcript_id "transcript46747.chr4.nnic"; exon "8"; exon_id "chr4.15944"; pos "last"	0	0	0	0
chr4	99866532	99866615	-	repeat_id "UCON73,chr4,99866532,99866615";repeat_class "DNA";repeat_family "hAT";	chr4	99866557	99866618	exon	assembly	+	gene_id "ENSG00000070190.12"; ID "211596"; transcript_id "ENST00000296414.11"; exon "9"; exon_id "chr4.16482"; pos "mid"	0	0	0	0
chr4	103098425	103098868	+	repeat_id "LTR16B2,chr4,103098425,103098868";repeat_class "LTR";repeat_family "ERVL";	chr4	103098644	103098802	exon	assembly	-	gene_id "ENSG00000164039.14"; ID "212289"; transcript_id "transcript52300.chr4.nic"; exon "2"; exon_id "chr4.17058"; pos "mid"	0	0	0	0
chr4	105456185	105456382	+	repeat_id "MIRb,chr4,105456185,105456382";repeat_class "SINE";repeat_family "MIR";	chr4	105456248	105456291	exon	assembly	-	gene_id "ENSG00000138777.19"; ID "212626"; transcript_id "ENST00000509031.5"; exon "3"; exon_id "chr4.17321"; pos "mid"	0	0	0	0
chr4	105703477	105704210	+	repeat_id "L2b,chr4,105703477,105704210";repeat_class "LINE";repeat_family "L2";	chr4	105703648	105703809	exon	assembly	-	gene_id "ENSG00000138785.14"; ID "212736"; transcript_id "ENST00000340139.9"; exon "2"; exon_id "chr4.17437"; pos "mid"	21.5145	127.645	79.5679	0
chr4	112180672	112180930	+	repeat_id "MLT1D,chr4,112180672,112180930";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr4	112180674	112180858	exon	assembly	+	gene_id "ENSG00000174749.5"; ID "213809"; transcript_id "transcript57562.chr4.nnic"; exon "2"; exon_id "chr4.18500"; pos "mid"	52.2492	0	0	0
chr4	113906616	113906798	+	repeat_id "MIRb,chr4,113906616,113906798";repeat_class "SINE";repeat_family "MIR";	chr4	113906665	113906745	exon	assembly	-	gene_id "ENSG00000180801.13"; ID "214526"; transcript_id "ENST00000509829.1"; exon "3"; exon_id "chr4.19039"; pos "mid"	0	33.564	0	0
chr4	113906616	113906798	+	repeat_id "MIRb,chr4,113906616,113906798";repeat_class "SINE";repeat_family "MIR";	chr4	113906696	113906745	exon	assembly	-	gene_id "ENSG00000180801.13"; ID "214489"; transcript_id "transcript59108.chr4.nnic"; exon "2"; exon_id "chr4.19019"; pos "mid"	0	33.564	0	0
chr4	113906616	113906798	+	repeat_id "MIRb,chr4,113906616,113906798";repeat_class "SINE";repeat_family "MIR";	chr4	113906696	113906745	exon	assembly	-	gene_id "ENSG00000180801.13"; ID "214501"; transcript_id "transcript59161.chr4.nnic"; exon "2"; exon_id "chr4.19019"; pos "mid"	0	33.564	0	0
chr4	119217496	119218269	-	repeat_id "L2a,chr4,119217496,119218269";repeat_class "LINE";repeat_family "L2";	chr4	119217550	119217673	exon	assembly	+	gene_id "ENSG00000145390.11"; ID "214974"; transcript_id "transcript60256.chr4.nic"; exon "2"; exon_id "chr4.19447"; pos "mid"	17.4165	0	0	0
chr4	119217496	119218269	-	repeat_id "L2a,chr4,119217496,119218269";repeat_class "LINE";repeat_family "L2";	chr4	119217550	119217673	exon	assembly	+	gene_id "ENSG00000145390.11"; ID "214989"; transcript_id "ENST00000274030.10"; exon "3"; exon_id "chr4.19447"; pos "mid"	17.4165	0	0	0
chr4	119235264	119235577	-	repeat_id "AluJr,chr4,119235264,119235577";repeat_class "SINE";repeat_family "Alu";	chr4	119235290	119235411	exon	assembly	+	gene_id "ENSG00000145390.11"; ID "214990"; transcript_id "ENST00000274030.10"; exon "4"; exon_id "chr4.19457"; pos "mid"	3.58575	0	0	0
chr4	119462895	119462972	+	repeat_id "LTR84b,chr4,119462895,119462972";repeat_class "LTR";repeat_family "ERVL";	chr4	119462896	119462979	exon	assembly	+	gene_id "ENSG00000245958.6"; ID "215092"; transcript_id "transcript60512.chr4.nic"; exon "5"; exon_id "chr4.19528"; pos "mid"	0	0	0	0
chr4	121815971	121816258	-	repeat_id "AluSx,chr4,121815971,121816258";repeat_class "SINE";repeat_family "Alu";	chr4	121816144	121816194	exon	assembly	+	gene_id "ENSG00000123737.12"; ID "215464"; transcript_id "ENST00000379663.7"; exon "11"; exon_id "chr4.19890"; pos "mid"	40.4675	0	0	0
chr4	121868409	121868714	+	repeat_id "AluJo,chr4,121868409,121868714";repeat_class "SINE";repeat_family "Alu";	chr4	121868677	121868722	exon	assembly	-	gene_id "ENSG00000145386.9"; ID "215542"; transcript_id "transcript63610.chr4.nnic"; exon "1"; exon_id "chr4.19914"; pos "first"	0	0	0	0
chr4	128176801	128177271	-	repeat_id "L2c,chr4,128176801,128177271";repeat_class "LINE";repeat_family "L2";	chr4	128176872	128176907	exon	assembly	+	gene_id "ENSG00000138709.17"; ID "216680"; transcript_id "ENST00000326639.10"; exon "13"; exon_id "chr4.20728"; pos "mid"	0	18.3076	0	0
chr4	131774538	131774965	+	repeat_id "MER77,chr4,131774538,131774965";repeat_class "LTR";repeat_family "ERVL";	chr4	131774593	131774899	exon	assembly	+	gene_id "ENSG00000251676.1"; ID "217090"; transcript_id "transcript66910.chr4.nnic"; exon "3"; exon_id "chr4.21159"; pos "last"	0	0	0	0
chr4	140628250	140628369	-	repeat_id "X24_LINE,chr4,140628250,140628369";repeat_class "LINE";repeat_family "L2";	chr4	140628300	140628365	exon	assembly	-	gene_id "ENSG00000109436.7"; ID "217805"; transcript_id "ENST00000442267.2"; exon "17"; exon_id "chr4.21856"; pos "mid"	0	16.7821	0	0
chr4	142473171	142475297	+	repeat_id "L1PA14,chr4,142473171,142475297";repeat_class "LINE";repeat_family "L1";	chr4	142474226	142474427	exon	assembly	-	gene_id "ENSG00000109452.12"; ID "218104"; transcript_id "transcript69159.chr4.nic"; exon "1"; exon_id "chr4.22014"; pos "first"	0	0	0	0
chr4	144996567	144999368	+	repeat_id "L1PA6,chr4,144996567,144999368";repeat_class "LINE";repeat_family "L1";	chr4	144999257	144999294	exon	assembly	-	gene_id "ENSG00000164162.13"; ID "218549"; transcript_id "transcript70680.chr4.nic"; exon "5"; exon_id "chr4.22492"; pos "mid"	0	0	0	0
chr4	144996567	144999368	+	repeat_id "L1PA6,chr4,144996567,144999368";repeat_class "LINE";repeat_family "L1";	chr4	144999257	144999294	exon	assembly	-	gene_id "ENSG00000164162.13"; ID "218580"; transcript_id "ENST00000510270.5"; exon "6"; exon_id "chr4.22492"; pos "mid"	0	0	0	0
chr4	152652540	152652595	+	repeat_id "AmnSINE1,chr4,152652540,152652595";repeat_class "SINE";repeat_family "5S-Deu-L2";	chr4	152652538	152652576	exon	assembly	-	gene_id "ENSG00000170006.11"; ID "220450"; transcript_id "transcript73944.chr4.nnic"; exon "3"; exon_id "chr4.23775"; pos "mid"	73.7635	0	0	0
chr4	152652540	152652595	+	repeat_id "AmnSINE1,chr4,152652540,152652595";repeat_class "SINE";repeat_family "5S-Deu-L2";	chr4	152652538	152652576	exon	assembly	-	gene_id "ENSG00000170006.11"; ID "220458"; transcript_id "ENST00000304385.7"; exon "3"; exon_id "chr4.23775"; pos "mid"	73.7635	0	0	0
chr4	157803387	157803931	-	repeat_id "MLT1F2,chr4,157803387,157803931";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr4	157803430	157803701	exon	assembly	-	gene_id "ENSG00000279703.1"; ID "221421"; transcript_id "transcript76273.chr4.nnic"; exon "3"; exon_id "chr4.24747"; pos "last"	0	0	0	0
chr4	173363563	173364887	+	repeat_id "L1ME4b,chr4,173363563,173364887";repeat_class "LINE";repeat_family "L1";	chr4	173363780	173364198	exon	assembly	-	gene_id "ENSG00000272870.1"; ID "223449"; transcript_id "ENST00000609153.1"; exon "3"; exon_id "chr4.26402"; pos "last"	0	0	0	0
chr4	174297686	174298170	-	repeat_id "HAL1,chr4,174297686,174298170";repeat_class "LINE";repeat_family "L1";	chr4	174297966	174298062	exon	assembly	+	gene_id "ENSG00000164118.12"; ID "223542"; transcript_id "ENST00000503780.5"; exon "2"; exon_id "chr4.26553"; pos "mid"	0	90.013	77.3581	136.063
chr4	176332116	176332245	+	repeat_id "L2d2,chr4,176332116,176332245";repeat_class "LINE";repeat_family "L2";	chr4	176332089	176332245	exon	assembly	+	gene_id "ENSG00000129128.12"; ID "223720"; transcript_id "transcript82155.chr4.nnic"; exon "2"; exon_id "chr4.26822"; pos "last"	0	0	0	0
chr4	182243415	182243695	-	repeat_id "L2,chr4,182243415,182243695";repeat_class "LINE";repeat_family "L2";	chr4	182243429	182243476	exon	assembly	+	gene_id "ENSG00000218336.8"; ID "224333"; transcript_id "ENST00000511685.5"; exon "1"; exon_id "chr4.27160"; pos "first"	0	0	0	0
chr4	184652023	184652112	-	repeat_id "L2d,chr4,184652023,184652112";repeat_class "LINE";repeat_family "L2";	chr4	184652023	184652100	exon	assembly	+	gene_id "ENSG00000164306.10"; ID "225018"; transcript_id "ENST00000314970.10"; exon "2"; exon_id "chr4.27629"; pos "mid"	0	35.5982	0	0
chr4	184652023	184652112	-	repeat_id "L2d,chr4,184652023,184652112";repeat_class "LINE";repeat_family "L2";	chr4	184652023	184652100	exon	assembly	+	gene_id "ENSG00000164306.10"; ID "225058"; transcript_id "ENST00000512834.5"; exon "2"; exon_id "chr4.27629"; pos "mid"	0	35.5982	0	0
chr4	184694229	184694374	+	repeat_id "MARNA,chr4,184694229,184694374";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr4	184694293	184694370	exon	assembly	+	gene_id "ENSG00000164306.10"; ID "225083"; transcript_id "ENST00000510864.1"; exon "1"; exon_id "chr4.27650"; pos "first"	0	0	0	0
chr5	30098631	30099054	-	repeat_id "L1PA7,chr5,30098631,30099054";repeat_class "LINE";repeat_family "L1";	chr5	30098616	30099051	exon	assembly	-	gene_id "novel_gene_chr5_6796"; ID "229248"; transcript_id "transcript6795.chr5.nnic"; exon "4"; exon_id "chr5.3022"; pos "last"	0	0	0	0
chr5	30098631	30099054	-	repeat_id "L1PA7,chr5,30098631,30099054";repeat_class "LINE";repeat_family "L1";	chr5	30098616	30099051	exon	assembly	-	gene_id "novel_gene_chr5_6796"; ID "229252"; transcript_id "transcript6844.chr5.nnic"; exon "3"; exon_id "chr5.3022"; pos "last"	0	0	0	0
chr5	30101449	30102332	+	repeat_id "L1MEi,chr5,30101449,30102332";repeat_class "LINE";repeat_family "L1";	chr5	30101448	30101534	exon	assembly	-	gene_id "novel_gene_chr5_6796"; ID "229247"; transcript_id "transcript6795.chr5.nnic"; exon "3"; exon_id "chr5.3021"; pos "mid"	0	0	0	0
chr5	31515357	31515548	-	repeat_id "MER5A,chr5,31515357,31515548";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	31515454	31515564	exon	assembly	-	gene_id "ENSG00000113360.16"; ID "229329"; transcript_id "ENST00000511367.6"; exon "6"; exon_id "chr5.3061"; pos "mid"	0	0	0	0
chr5	31530668	31530954	+	repeat_id "L2c,chr5,31530668,31530954";repeat_class "LINE";repeat_family "L2";	chr5	31530798	31530924	exon	assembly	-	gene_id "ENSG00000113360.16"; ID "229325"; transcript_id "ENST00000511367.6"; exon "2"; exon_id "chr5.3057"; pos "mid"	165.968	100.184	257.491	24.649
chr5	31530668	31530954	+	repeat_id "L2c,chr5,31530668,31530954";repeat_class "LINE";repeat_family "L2";	chr5	31530798	31530924	exon	assembly	-	gene_id "ENSG00000113360.16"; ID "229362"; transcript_id "ENST00000513349.5"; exon "3"; exon_id "chr5.3057"; pos "mid"	165.968	100.184	257.491	24.649
chr5	31548315	31548729	-	repeat_id "THE1B-int,chr5,31548315,31548729";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	31548490	31548687	exon	assembly	+	gene_id "ENSG00000082213.17"; ID "229505"; transcript_id "ENST00000504866.1"; exon "2"; exon_id "chr5.3135"; pos "mid"	0	0	0	0
chr5	34948875	34949661	+	repeat_id "L1MC4,chr5,34948875,34949661";repeat_class "LINE";repeat_family "L1";	chr5	34949543	34949677	exon	assembly	+	gene_id "ENSG00000168724.14"; ID "230401"; transcript_id "ENST00000382021.2"; exon "10"; exon_id "chr5.3888"; pos "mid"	0	13.7308	0	0
chr5	37393339	37393682	-	repeat_id "L1M2,chr5,37393339,37393682";repeat_class "LINE";repeat_family "L1";	chr5	37393542	37393607	exon	assembly	+	gene_id "ENSG00000082068.8"; ID "231384"; transcript_id "transcript11843.chr5.nnic"; exon "5"; exon_id "chr5.4668"; pos "last"	0	0	0	0
chr5	38466128	38466633	-	repeat_id "MLT1H,chr5,38466128,38466633";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	38466163	38466398	exon	assembly	-	gene_id "ENSG00000251257.2"; ID "231459"; transcript_id "ENST00000510137.1"; exon "2"; exon_id "chr5.4799"; pos "last"	0	17.7992	0	0
chr5	38466128	38466633	-	repeat_id "MLT1H,chr5,38466128,38466633";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	38466166	38466483	exon	assembly	-	gene_id "ENSG00000251257.2"; ID "231453"; transcript_id "transcript12086.chr5.nnic"; exon "2"; exon_id "chr5.4795"; pos "last"	0	17.7992	0	0
chr5	39520957	39522043	-	repeat_id "L1PA13,chr5,39520957,39522043";repeat_class "LINE";repeat_family "L1";	chr5	39521519	39521627	exon	assembly	+	gene_id "ENSG00000271334.5"; ID "231943"; transcript_id "transcript12783.chr5.nic"; exon "2"; exon_id "chr5.5164"; pos "mid"	0	33.0554	0	0
chr5	39520957	39522043	-	repeat_id "L1PA13,chr5,39520957,39522043";repeat_class "LINE";repeat_family "L1";	chr5	39521519	39521627	exon	assembly	+	gene_id "ENSG00000271334.5"; ID "231947"; transcript_id "ENST00000604954.5"; exon "2"; exon_id "chr5.5164"; pos "mid"	0	33.0554	0	0
chr5	39520957	39522043	-	repeat_id "L1PA13,chr5,39520957,39522043";repeat_class "LINE";repeat_family "L1";	chr5	39521519	39521627	exon	assembly	+	gene_id "ENSG00000271334.5"; ID "231950"; transcript_id "ENST00000603514.1"; exon "1"; exon_id "chr5.5164"; pos "first"	0	33.0554	0	0
chr5	40685700	40685789	+	repeat_id "MIRc,chr5,40685700,40685789";repeat_class "SINE";repeat_family "MIR";	chr5	40685731	40685788	exon	assembly	+	gene_id "ENSG00000171522.5"; ID "232019"; transcript_id "transcript13067.chr5.nnic"; exon "3"; exon_id "chr5.5215"; pos "mid"	0	5.0855	0	0
chr5	40833824	40834065	+	repeat_id "AluJb,chr5,40833824,40834065";repeat_class "SINE";repeat_family "Alu";	chr5	40833961	40834037	exon	assembly	-	gene_id "ENSG00000145592.13"; ID "232115"; transcript_id "ENST00000507642.5"; exon "3"; exon_id "chr5.5258"; pos "mid"	0	0	0	0
chr5	43307758	43307827	+	repeat_id "LFSINE_Vert,chr5,43307758,43307827";repeat_class "SINE";repeat_family "tRNA";	chr5	43307766	43307824	exon	assembly	-	gene_id "ENSG00000112972.14"; ID "232624"; transcript_id "ENST00000325110.10"; exon "2"; exon_id "chr5.5782"; pos "mid"	116.28	738.918	172.398	453.543
chr5	43307758	43307827	+	repeat_id "LFSINE_Vert,chr5,43307758,43307827";repeat_class "SINE";repeat_family "tRNA";	chr5	43307766	43307824	exon	assembly	-	gene_id "ENSG00000112972.14"; ID "232636"; transcript_id "transcript15405.chr5.nnic"; exon "2"; exon_id "chr5.5782"; pos "mid"	116.28	738.918	172.398	453.543
chr5	43307758	43307827	+	repeat_id "LFSINE_Vert,chr5,43307758,43307827";repeat_class "SINE";repeat_family "tRNA";	chr5	43307766	43307824	exon	assembly	-	gene_id "ENSG00000112972.14"; ID "232665"; transcript_id "ENST00000507293.1"; exon "2"; exon_id "chr5.5782"; pos "mid"	116.28	738.918	172.398	453.543
chr5	43658391	43659054	-	repeat_id "L1MEb,chr5,43658391,43659054";repeat_class "LINE";repeat_family "L1";	chr5	43658773	43658953	exon	assembly	+	gene_id "ENSG00000112992.16"; ID "232930"; transcript_id "transcript16837.chr5.nnic"; exon "1"; exon_id "chr5.5961"; pos "first"	0	0	0	0
chr5	53604431	53604915	+	repeat_id "L2b,chr5,53604431,53604915";repeat_class "LINE";repeat_family "L2";	chr5	53604724	53604895	exon	assembly	+	gene_id "ENSG00000164258.11"; ID "233773"; transcript_id "ENST00000506974.5"; exon "3"; exon_id "chr5.6486"; pos "mid"	22.0267	0	40.8891	0
chr5	55711373	55711569	+	repeat_id "MIR3,chr5,55711373,55711569";repeat_class "SINE";repeat_family "MIR";	chr5	55711452	55711499	exon	assembly	-	gene_id "ENSG00000177058.11"; ID "234175"; transcript_id "transcript20372.chr5.nic"; exon "2"; exon_id "chr5.6879"; pos "mid"	6.147	46.2778	0	32.5367
chr5	55711373	55711569	+	repeat_id "MIR3,chr5,55711373,55711569";repeat_class "SINE";repeat_family "MIR";	chr5	55711452	55711499	exon	assembly	-	gene_id "ENSG00000177058.11"; ID "234194"; transcript_id "transcript20382.chr5.nic"; exon "2"; exon_id "chr5.6879"; pos "mid"	6.147	46.2778	0	32.5367
chr5	55711373	55711569	+	repeat_id "MIR3,chr5,55711373,55711569";repeat_class "SINE";repeat_family "MIR";	chr5	55711452	55711499	exon	assembly	-	gene_id "ENSG00000177058.11"; ID "234212"; transcript_id "ENST00000396865.6"; exon "2"; exon_id "chr5.6879"; pos "mid"	6.147	46.2778	0	32.5367
chr5	55711373	55711569	+	repeat_id "MIR3,chr5,55711373,55711569";repeat_class "SINE";repeat_family "MIR";	chr5	55711452	55711499	exon	assembly	-	gene_id "ENSG00000177058.11"; ID "234277"; transcript_id "transcript20527.chr5.nic"; exon "2"; exon_id "chr5.6879"; pos "mid"	6.147	46.2778	0	32.5367
chr5	60798566	60799755	+	repeat_id "L1M3,chr5,60798566,60799755";repeat_class "LINE";repeat_family "L1";	chr5	60799180	60799230	exon	assembly	-	gene_id "ENSG00000164181.13"; ID "235308"; transcript_id "ENST00000508821.5"; exon "2"; exon_id "chr5.7743"; pos "mid"	0	0	0	0
chr5	61161101	61161310	+	repeat_id "UCON38,chr5,61161101,61161310";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	61161088	61161227	exon	assembly	-	gene_id "ENSG00000188725.7"; ID "235452"; transcript_id "transcript23426.chr5.nnic"; exon "4"; exon_id "chr5.7828"; pos "mid"	60.9574	64.0768	65.2016	44.3684
chr5	61161101	61161310	+	repeat_id "UCON38,chr5,61161101,61161310";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	61161088	61161227	exon	assembly	-	gene_id "ENSG00000188725.7"; ID "235456"; transcript_id "ENST00000339020.7"; exon "2"; exon_id "chr5.7828"; pos "mid"	60.9574	64.0768	65.2016	44.3684
chr5	61161101	61161310	+	repeat_id "UCON38,chr5,61161101,61161310";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	61161088	61161227	exon	assembly	-	gene_id "ENSG00000188725.7"; ID "235460"; transcript_id "transcript23673.chr5.nnic"; exon "2"; exon_id "chr5.7828"; pos "mid"	60.9574	64.0768	65.2016	44.3684
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235704"; transcript_id "transcript24116.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235711"; transcript_id "transcript24129.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235717"; transcript_id "transcript24132.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235723"; transcript_id "transcript24148.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235728"; transcript_id "transcript24151.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235733"; transcript_id "transcript24162.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	61916181	61916831	+	repeat_id "LTR104_Mam,chr5,61916181,61916831";repeat_class "LTR";repeat_family "Gypsy";	chr5	61916233	61916289	exon	assembly	-	gene_id "novel_gene_chr5_24117"; ID "235737"; transcript_id "transcript24168.chr5.nnic"; exon "2"; exon_id "chr5.7956"; pos "mid"	0	0	0	0
chr5	65561452	65561591	+	repeat_id "MLT1A0,chr5,65561452,65561591";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	65561463	65561564	exon	assembly	-	gene_id "ENSG00000123219.12"; ID "236342"; transcript_id "transcript26170.chr5.nnic"; exon "2"; exon_id "chr5.8360"; pos "mid"	180.311	184.602	221.023	232.688
chr5	65561452	65561591	+	repeat_id "MLT1A0,chr5,65561452,65561591";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	65561463	65561564	exon	assembly	-	gene_id "ENSG00000123219.12"; ID "236376"; transcript_id "ENST00000396679.5"; exon "2"; exon_id "chr5.8360"; pos "mid"	180.311	184.602	221.023	232.688
chr5	65561452	65561591	+	repeat_id "MLT1A0,chr5,65561452,65561591";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	65561497	65561564	exon	assembly	-	gene_id "ENSG00000123219.12"; ID "236353"; transcript_id "transcript26172.chr5.nnic"; exon "2"; exon_id "chr5.8370"; pos "mid"	180.311	184.602	221.023	232.688
chr5	65561452	65561591	+	repeat_id "MLT1A0,chr5,65561452,65561591";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	65561497	65561564	exon	assembly	-	gene_id "ENSG00000123219.12"; ID "236364"; transcript_id "ENST00000514814.5"; exon "2"; exon_id "chr5.8370"; pos "mid"	180.311	184.602	221.023	232.688
chr5	65561452	65561591	+	repeat_id "MLT1A0,chr5,65561452,65561591";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	65561497	65561564	exon	assembly	-	gene_id "ENSG00000123219.12"; ID "236440"; transcript_id "ENST00000510354.1"; exon "1"; exon_id "chr5.8370"; pos "first"	180.311	184.602	221.023	232.688
chr5	69562648	69562923	-	repeat_id "AluSz,chr5,69562648,69562923";repeat_class "SINE";repeat_family "Alu";	chr5	69562673	69562770	exon	assembly	+	gene_id "ENSG00000183474.15"; ID "237812"; transcript_id "ENST00000380729.7"; exon "2"; exon_id "chr5.9285"; pos "mid"	0	0	0	0
chr5	70076975	70077573	+	repeat_id "L1MC5a,chr5,70076975,70077573";repeat_class "LINE";repeat_family "L1";	chr5	70077019	70077592	exon	assembly	+	gene_id "ENSG00000205571.13"; ID "237887"; transcript_id "ENST00000380743.8"; exon "9"; exon_id "chr5.9386"; pos "last"	0	0	0	0
chr5	70076975	70077573	+	repeat_id "L1MC5a,chr5,70076975,70077573";repeat_class "LINE";repeat_family "L1";	chr5	70077019	70077592	exon	assembly	+	gene_id "ENSG00000205571.13"; ID "237896"; transcript_id "ENST00000626847.2"; exon "8"; exon_id "chr5.9386"; pos "last"	0	0	0	0
chr5	70076975	70077573	+	repeat_id "L1MC5a,chr5,70076975,70077573";repeat_class "LINE";repeat_family "L1";	chr5	70077019	70077592	exon	assembly	+	gene_id "ENSG00000205571.13"; ID "237905"; transcript_id "ENST00000380742.8"; exon "8"; exon_id "chr5.9386"; pos "last"	0	0	0	0
chr5	70076975	70077573	+	repeat_id "L1MC5a,chr5,70076975,70077573";repeat_class "LINE";repeat_family "L1";	chr5	70077019	70077596	exon	assembly	+	gene_id "ENSG00000205571.13"; ID "237923"; transcript_id "ENST00000506734.5"; exon "9"; exon_id "chr5.9393"; pos "last"	0	0	0	0
chr5	70417797	70418072	-	repeat_id "AluSz,chr5,70417797,70418072";repeat_class "SINE";repeat_family "Alu";	chr5	70417822	70417919	exon	assembly	+	gene_id "ENSG00000226259.10"; ID "237993"; transcript_id "transcript32513.chr5.nic"; exon "2"; exon_id "chr5.9447"; pos "mid"	0	0	0	0
chr5	70417797	70418072	-	repeat_id "AluSz,chr5,70417797,70418072";repeat_class "SINE";repeat_family "Alu";	chr5	70417822	70417919	exon	assembly	+	gene_id "ENSG00000226259.10"; ID "238064"; transcript_id "ENST00000507549.7"; exon "2"; exon_id "chr5.9447"; pos "mid"	0	0	0	0
chr5	70952395	70952993	+	repeat_id "L1MC5a,chr5,70952395,70952993";repeat_class "LINE";repeat_family "L1";	chr5	70952439	70953012	exon	assembly	+	gene_id "ENSG00000172062.16"; ID "238171"; transcript_id "ENST00000380707.8"; exon "9"; exon_id "chr5.9535"; pos "last"	0	0	0	0
chr5	70952395	70952993	+	repeat_id "L1MC5a,chr5,70952395,70952993";repeat_class "LINE";repeat_family "L1";	chr5	70952439	70953040	exon	assembly	+	gene_id "ENSG00000172062.16"; ID "238190"; transcript_id "ENST00000506163.5"; exon "8"; exon_id "chr5.9540"; pos "last"	0	0	0	0
chr5	71064972	71065247	+	repeat_id "AluSz,chr5,71064972,71065247";repeat_class "SINE";repeat_family "Alu";	chr5	71065125	71065222	exon	assembly	-	gene_id "ENSG00000145736.14"; ID "238244"; transcript_id "transcript33369.chr5.nnic"; exon "2"; exon_id "chr5.9562"; pos "mid"	0	0	0	0
chr5	71548669	71548771	+	repeat_id "L3,chr5,71548669,71548771";repeat_class "LINE";repeat_family "CR1";	chr5	71548682	71548745	exon	assembly	+	gene_id "ENSG00000145734.18"; ID "238358"; transcript_id "ENST00000358731.8"; exon "33"; exon_id "chr5.9724"; pos "mid"	113.719	17.7992	0	0
chr5	76728686	76728990	-	repeat_id "AluSx,chr5,76728686,76728990";repeat_class "SINE";repeat_family "Alu";	chr5	76728712	76728833	exon	assembly	+	gene_id "ENSG00000181104.6"; ID "240468"; transcript_id "transcript39419.chr5.nnic"; exon "2"; exon_id "chr5.11012"; pos "mid"	0	0	0	0
chr5	77441741	77442407	+	repeat_id "L1ME4a,chr5,77441741,77442407";repeat_class "LINE";repeat_family "L1";	chr5	77441799	77441898	exon	assembly	-	gene_id "ENSG00000164253.13"; ID "240713"; transcript_id "transcript40070.chr5.nnic"; exon "9"; exon_id "chr5.11217"; pos "last"	16.9043	0	0	32.5367
chr5	77491011	77491450	+	repeat_id "LTR7,chr5,77491011,77491450";repeat_class "LTR";repeat_family "ERV1";	chr5	77491193	77491319	exon	assembly	-	gene_id "ENSG00000164253.13"; ID "240679"; transcript_id "transcript39919.chr5.nic"; exon "1"; exon_id "chr5.11214"; pos "first"	0	0	0	0
chr5	79998132	79998507	+	repeat_id "MSTA,chr5,79998132,79998507";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	79998332	79998375	exon	assembly	+	gene_id "ENSG00000113296.14"; ID "241474"; transcript_id "transcript41982.chr5.nnic"; exon "2"; exon_id "chr5.11750"; pos "mid"	0	0	0	0
chr5	80494814	80495548	+	repeat_id "Tigger1,chr5,80494814,80495548";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	80495053	80495283	exon	assembly	+	gene_id "ENSG00000152380.9"; ID "241746"; transcript_id "transcript42408.chr5.nnic"; exon "2"; exon_id "chr5.11979"; pos "mid"	0	0	0	0
chr5	83310609	83311116	+	repeat_id "MLT1D,chr5,83310609,83311116";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	83310789	83311069	exon	assembly	+	gene_id "ENSG00000152422.15"; ID "242353"; transcript_id "ENST00000542685.5"; exon "8"; exon_id "chr5.12455"; pos "last"	180.311	0	0	0
chr5	86619667	86619877	-	repeat_id "MIR,chr5,86619667,86619877";repeat_class "SINE";repeat_family "MIR";	chr5	86619739	86619878	exon	assembly	+	gene_id "ENSG00000127184.12"; ID "242555"; transcript_id "ENST00000505430.5"; exon "3"; exon_id "chr5.12637"; pos "mid"	0	0	0	0
chr5	88281785	88282187	+	repeat_id "MSTB,chr5,88281785,88282187";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88282042	88282106	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242857"; transcript_id "transcript45639.chr5.nic"; exon "3"; exon_id "chr5.12807"; pos "mid"	72.2269	33.564	116.037	0
chr5	88281785	88282187	+	repeat_id "MSTB,chr5,88281785,88282187";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88282042	88282106	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242865"; transcript_id "transcript45656.chr5.nic"; exon "3"; exon_id "chr5.12807"; pos "mid"	72.2269	33.564	116.037	0
chr5	88281785	88282187	+	repeat_id "MSTB,chr5,88281785,88282187";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88282042	88282106	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242873"; transcript_id "transcript45694.chr5.nic"; exon "3"; exon_id "chr5.12807"; pos "mid"	72.2269	33.564	116.037	0
chr5	88281785	88282187	+	repeat_id "MSTB,chr5,88281785,88282187";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88282042	88282106	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242880"; transcript_id "transcript45722.chr5.nic"; exon "3"; exon_id "chr5.12807"; pos "mid"	72.2269	33.564	116.037	0
chr5	88281785	88282187	+	repeat_id "MSTB,chr5,88281785,88282187";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88282042	88282106	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242911"; transcript_id "ENST00000507736.1"; exon "2"; exon_id "chr5.12807"; pos "mid"	72.2269	33.564	116.037	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88282715	88282866	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242858"; transcript_id "transcript45639.chr5.nic"; exon "4"; exon_id "chr5.12808"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88282715	88282866	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242866"; transcript_id "transcript45656.chr5.nic"; exon "4"; exon_id "chr5.12808"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88282715	88282866	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242874"; transcript_id "transcript45694.chr5.nic"; exon "4"; exon_id "chr5.12808"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88282715	88282866	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242881"; transcript_id "transcript45722.chr5.nic"; exon "4"; exon_id "chr5.12808"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88282715	88282866	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242912"; transcript_id "ENST00000507736.1"; exon "3"; exon_id "chr5.12808"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88283010	88283086	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242859"; transcript_id "transcript45639.chr5.nic"; exon "5"; exon_id "chr5.12809"; pos "mid"	17.9288	0	5.52555	0
chr5	88282584	88283084	-	repeat_id "Tigger7,chr5,88282584,88283084";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr5	88283010	88283086	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242867"; transcript_id "transcript45656.chr5.nic"; exon "5"; exon_id "chr5.12809"; pos "mid"	17.9288	0	5.52555	0
chr5	88287259	88287699	+	repeat_id "MLT1C2,chr5,88287259,88287699";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88287436	88287656	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242861"; transcript_id "transcript45639.chr5.nic"; exon "7"; exon_id "chr5.12811"; pos "last"	148.552	89.5041	0	37.4665
chr5	88287259	88287699	+	repeat_id "MLT1C2,chr5,88287259,88287699";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88287436	88287656	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242869"; transcript_id "transcript45656.chr5.nic"; exon "7"; exon_id "chr5.12811"; pos "last"	148.552	89.5041	0	37.4665
chr5	88287259	88287699	+	repeat_id "MLT1C2,chr5,88287259,88287699";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88287436	88287656	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242876"; transcript_id "transcript45694.chr5.nic"; exon "6"; exon_id "chr5.12811"; pos "last"	148.552	89.5041	0	37.4665
chr5	88287259	88287699	+	repeat_id "MLT1C2,chr5,88287259,88287699";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88287436	88287656	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242883"; transcript_id "transcript45722.chr5.nic"; exon "6"; exon_id "chr5.12811"; pos "last"	148.552	89.5041	0	37.4665
chr5	88287259	88287699	+	repeat_id "MLT1C2,chr5,88287259,88287699";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	88287436	88287657	exon	assembly	+	gene_id "ENSG00000247828.7"; ID "242914"; transcript_id "ENST00000507736.1"; exon "5"; exon_id "chr5.12824"; pos "last"	148.552	89.5041	0	37.4665
chr5	93075640	93075768	+	repeat_id "FLAM_A,chr5,93075640,93075768";repeat_class "SINE";repeat_family "Alu";	chr5	93075658	93075750	exon	assembly	-	gene_id "ENSG00000251361.1"; ID "243198"; transcript_id "transcript47019.chr5.nnic"; exon "4"; exon_id "chr5.13465"; pos "mid"	0	0	0	0
chr5	93075640	93075768	+	repeat_id "FLAM_A,chr5,93075640,93075768";repeat_class "SINE";repeat_family "Alu";	chr5	93075658	93075750	exon	assembly	-	gene_id "ENSG00000251361.1"; ID "243218"; transcript_id "transcript47060.chr5.nnic"; exon "4"; exon_id "chr5.13465"; pos "mid"	0	0	0	0
chr5	93544642	93544939	+	repeat_id "AluSc,chr5,93544642,93544939";repeat_class "SINE";repeat_family "Alu";	chr5	93544795	93544915	exon	assembly	-	gene_id "ENSG00000237187.8"; ID "243291"; transcript_id "ENST00000606696.5"; exon "5"; exon_id "chr5.13496"; pos "mid"	0	0	0	0
chr5	93553730	93553876	-	repeat_id "MamSINE1,chr5,93553730,93553876";repeat_class "SINE";repeat_family "tRNA-RTE";	chr5	93553761	93553863	exon	assembly	-	gene_id "ENSG00000237187.8"; ID "243254"; transcript_id "transcript47200.chr5.nnic"; exon "4"; exon_id "chr5.13486"; pos "mid"	0	53.906	55.2557	66.0596
chr5	93553730	93553876	-	repeat_id "MamSINE1,chr5,93553730,93553876";repeat_class "SINE";repeat_family "tRNA-RTE";	chr5	93553761	93553863	exon	assembly	-	gene_id "ENSG00000237187.8"; ID "243261"; transcript_id "transcript47265.chr5.nic"; exon "4"; exon_id "chr5.13486"; pos "mid"	0	53.906	55.2557	66.0596
chr5	93553730	93553876	-	repeat_id "MamSINE1,chr5,93553730,93553876";repeat_class "SINE";repeat_family "tRNA-RTE";	chr5	93553761	93553863	exon	assembly	-	gene_id "ENSG00000237187.8"; ID "243267"; transcript_id "transcript47267.chr5.nic"; exon "4"; exon_id "chr5.13486"; pos "mid"	0	53.906	55.2557	66.0596
chr5	93553730	93553876	-	repeat_id "MamSINE1,chr5,93553730,93553876";repeat_class "SINE";repeat_family "tRNA-RTE";	chr5	93553761	93553863	exon	assembly	-	gene_id "ENSG00000237187.8"; ID "243290"; transcript_id "ENST00000606696.5"; exon "4"; exon_id "chr5.13486"; pos "mid"	0	53.906	55.2557	66.0596
chr5	108768043	108768250	-	repeat_id "L3b,chr5,108768043,108768250";repeat_class "LINE";repeat_family "CR1";	chr5	108768093	108768238	exon	assembly	+	gene_id "ENSG00000151422.12"; ID "246131"; transcript_id "ENST00000281092.8"; exon "2"; exon_id "chr5.15427"; pos "mid"	0	17.2907	0	0
chr5	108768043	108768250	-	repeat_id "L3b,chr5,108768043,108768250";repeat_class "LINE";repeat_family "CR1";	chr5	108768093	108768238	exon	assembly	+	gene_id "ENSG00000151422.12"; ID "246152"; transcript_id "transcript52437.chr5.nic"; exon "2"; exon_id "chr5.15427"; pos "mid"	0	17.2907	0	0
chr5	109383201	109383644	+	repeat_id "Charlie7,chr5,109383201,109383644";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	109383403	109383520	exon	assembly	-	gene_id "ENSG00000198961.9"; ID "246317"; transcript_id "transcript52804.chr5.nic"; exon "2"; exon_id "chr5.15516"; pos "mid"	65.5675	116.457	22.1022	77.8912
chr5	109383201	109383644	+	repeat_id "Charlie7,chr5,109383201,109383644";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	109383403	109383520	exon	assembly	-	gene_id "ENSG00000198961.9"; ID "246328"; transcript_id "ENST00000361189.6"; exon "2"; exon_id "chr5.15516"; pos "mid"	65.5675	116.457	22.1022	77.8912
chr5	109383201	109383644	+	repeat_id "Charlie7,chr5,109383201,109383644";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	109383403	109383520	exon	assembly	-	gene_id "ENSG00000198961.9"; ID "246339"; transcript_id "transcript52827.chr5.nic"; exon "2"; exon_id "chr5.15516"; pos "mid"	65.5675	116.457	22.1022	77.8912
chr5	111074628	111074917	-	repeat_id "AluSx4,chr5,111074628,111074917";repeat_class "SINE";repeat_family "Alu";	chr5	111074656	111074762	exon	assembly	+	gene_id "ENSG00000145777.14"; ID "246626"; transcript_id "transcript53492.chr5.nnic"; exon "2"; exon_id "chr5.15733"; pos "mid"	0	0	0	0
chr5	112981030	112981308	-	repeat_id "AluJr4,chr5,112981030,112981308";repeat_class "SINE";repeat_family "Alu";	chr5	112981042	112981171	exon	assembly	+	gene_id "ENSG00000172795.15"; ID "247031"; transcript_id "transcript55154.chr5.nnic"; exon "2"; exon_id "chr5.16123"; pos "mid"	0	0	0	0
chr5	119280349	119281275	-	repeat_id "HAL1M8,chr5,119280349,119281275";repeat_class "LINE";repeat_family "L1";	chr5	119280425	119280489	exon	assembly	+	gene_id "ENSG00000145779.7"; ID "247925"; transcript_id "transcript57875.chr5.nnic"; exon "2"; exon_id "chr5.16927"; pos "mid"	0	0	0	0
chr5	120481150	120481430	-	repeat_id "AluSx,chr5,120481150,120481430";repeat_class "SINE";repeat_family "Alu";	chr5	120481169	120481293	exon	assembly	+	gene_id "ENSG00000184838.14"; ID "248167"; transcript_id "transcript58561.chr5.nnic"; exon "2"; exon_id "chr5.17066"; pos "mid"	0	0	0	0
chr5	120481150	120481430	-	repeat_id "AluSx,chr5,120481150,120481430";repeat_class "SINE";repeat_family "Alu";	chr5	120481169	120481293	exon	assembly	+	gene_id "ENSG00000184838.14"; ID "248178"; transcript_id "transcript58592.chr5.nnic"; exon "2"; exon_id "chr5.17066"; pos "mid"	0	0	0	0
chr5	120481150	120481430	-	repeat_id "AluSx,chr5,120481150,120481430";repeat_class "SINE";repeat_family "Alu";	chr5	120481169	120481293	exon	assembly	+	gene_id "ENSG00000184838.14"; ID "248192"; transcript_id "transcript58622.chr5.nnic"; exon "2"; exon_id "chr5.17066"; pos "mid"	0	0	0	0
chr5	127056314	127056679	-	repeat_id "THE1B,chr5,127056314,127056679";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	127056397	127056506	exon	assembly	-	gene_id "ENSG00000164241.13"; ID "249318"; transcript_id "transcript62196.chr5.nic"; exon "4"; exon_id "chr5.17926"; pos "mid"	0	0	0	0
chr5	127956649	127956938	+	repeat_id "AluSx4,chr5,127956649,127956938";repeat_class "SINE";repeat_family "Alu";	chr5	127956804	127956921	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249479"; transcript_id "ENST00000514409.5"; exon "3"; exon_id "chr5.18083"; pos "mid"	0	0	0	0
chr5	127966105	127966903	-	repeat_id "LTR1B,chr5,127966105,127966903";repeat_class "LTR";repeat_family "ERV1";	chr5	127966455	127966928	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249466"; transcript_id "transcript62756.chr5.nic"; exon "3"; exon_id "chr5.18080"; pos "last"	0	39.1583	0	0
chr5	127966105	127966903	-	repeat_id "LTR1B,chr5,127966105,127966903";repeat_class "LTR";repeat_family "ERV1";	chr5	127966455	127966928	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249470"; transcript_id "transcript62760.chr5.nnic"; exon "3"; exon_id "chr5.18080"; pos "last"	0	39.1583	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249457"; transcript_id "transcript62751.chr5.nic"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249461"; transcript_id "transcript62752.chr5.nic"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249465"; transcript_id "transcript62756.chr5.nic"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249469"; transcript_id "transcript62760.chr5.nnic"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249478"; transcript_id "ENST00000514409.5"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249484"; transcript_id "ENST00000501652.5"; exon "3"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128061074	128061525	+	repeat_id "MER34A,chr5,128061074,128061525";repeat_class "LTR";repeat_family "ERV1";	chr5	128061144	128061244	exon	assembly	-	gene_id "ENSG00000245937.7"; ID "249488"; transcript_id "ENST00000501702.6"; exon "2"; exon_id "chr5.18076"; pos "mid"	0	18.3078	0	0
chr5	128399046	128400763	+	repeat_id "L1MEd,chr5,128399046,128400763";repeat_class "LINE";repeat_family "L1";	chr5	128399698	128399880	exon	assembly	-	gene_id "ENSG00000138829.11"; ID "249595"; transcript_id "transcript62994.chr5.nnic"; exon "9"; exon_id "chr5.18191"; pos "last"	0	0	0	0
chr5	132592159	132593422	-	repeat_id "HSMAR2,chr5,132592159,132593422";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr5	132592764	132593527	exon	assembly	+	gene_id "ENSG00000113522.13"; ID "250913"; transcript_id "ENST00000434288.1"; exon "3"; exon_id "chr5.19106"; pos "last"	0	0	0	0
chr5	132827335	132827649	+	repeat_id "AluSc,chr5,132827335,132827649";repeat_class "SINE";repeat_family "Alu";	chr5	132827461	132827607	exon	assembly	-	gene_id "ENSG00000164403.14"; ID "251052"; transcript_id "ENST00000378679.7"; exon "2"; exon_id "chr5.19279"; pos "mid"	8.70825	0	0	0
chr5	133022752	133023012	+	repeat_id "Plat_L3,chr5,133022752,133023012";repeat_class "LINE";repeat_family "CR1";	chr5	133022811	133022906	exon	assembly	-	gene_id "ENSG00000155329.11"; ID "251270"; transcript_id "transcript66633.chr5.nnic"; exon "2"; exon_id "chr5.19407"; pos "mid"	0	18.8163	67.4117	106.484
chr5	133022752	133023012	+	repeat_id "Plat_L3,chr5,133022752,133023012";repeat_class "LINE";repeat_family "CR1";	chr5	133022841	133022906	exon	assembly	-	gene_id "ENSG00000155329.11"; ID "251253"; transcript_id "ENST00000355372.6"; exon "2"; exon_id "chr5.19398"; pos "mid"	0	18.8163	67.4117	106.484
chr5	133022752	133023012	+	repeat_id "Plat_L3,chr5,133022752,133023012";repeat_class "LINE";repeat_family "CR1";	chr5	133022841	133022906	exon	assembly	-	gene_id "ENSG00000155329.11"; ID "251277"; transcript_id "ENST00000509437.5"; exon "2"; exon_id "chr5.19398"; pos "mid"	0	18.8163	67.4117	106.484
chr5	133022752	133023012	+	repeat_id "Plat_L3,chr5,133022752,133023012";repeat_class "LINE";repeat_family "CR1";	chr5	133022841	133022906	exon	assembly	-	gene_id "ENSG00000155329.11"; ID "251287"; transcript_id "ENST00000504170.2"; exon "2"; exon_id "chr5.19398"; pos "mid"	0	18.8163	67.4117	106.484
chr5	134631918	134632237	+	repeat_id "AluYk2,chr5,134631918,134632237";repeat_class "SINE";repeat_family "Alu";	chr5	134632077	134632195	exon	assembly	-	gene_id "ENSG00000152700.13"; ID "251900"; transcript_id "ENST00000439578.5"; exon "2"; exon_id "chr5.19862"; pos "mid"	19.9778	0	0	0
chr5	136152657	136152778	-	repeat_id "FLAM_A,chr5,136152657,136152778";repeat_class "SINE";repeat_family "Alu";	chr5	136152675	136152758	exon	assembly	+	gene_id "ENSG00000113658.16"; ID "252441"; transcript_id "transcript73227.chr5.nnic"; exon "2"; exon_id "chr5.20408"; pos "mid"	0	0	0	0
chr5	139005455	139011486	-	repeat_id "L1PA2,chr5,139005455,139011486";repeat_class "LINE";repeat_family "L1";	chr5	139011392	139011486	exon	assembly	-	gene_id "ENSG00000120725.12"; ID "253677"; transcript_id "transcript77244.chr5.nnic"; exon "1"; exon_id "chr5.21396"; pos "first"	0	0	0	0
chr5	139614842	139614967	-	repeat_id "OldhAT1,chr5,139614842,139614967";repeat_class "DNA";repeat_family "hAT-Ac";	chr5	139614861	139614966	exon	assembly	+	gene_id "ENSG00000131508.15"; ID "254119"; transcript_id "transcript78973.chr5.nnic"; exon "5"; exon_id "chr5.21688"; pos "mid"	89.1311	43.2266	9.94599	10.8456
chr5	139614842	139614967	-	repeat_id "OldhAT1,chr5,139614842,139614967";repeat_class "DNA";repeat_family "hAT-Ac";	chr5	139614861	139614966	exon	assembly	+	gene_id "ENSG00000131508.15"; ID "254128"; transcript_id "ENST00000398733.7"; exon "5"; exon_id "chr5.21688"; pos "mid"	89.1311	43.2266	9.94599	10.8456
chr5	139614842	139614967	-	repeat_id "OldhAT1,chr5,139614842,139614967";repeat_class "DNA";repeat_family "hAT-Ac";	chr5	139614861	139614966	exon	assembly	+	gene_id "ENSG00000131508.15"; ID "254144"; transcript_id "ENST00000398734.8"; exon "5"; exon_id "chr5.21688"; pos "mid"	89.1311	43.2266	9.94599	10.8456
chr5	141550425	141550611	+	repeat_id "LTR52,chr5,141550425,141550611";repeat_class "LTR";repeat_family "ERVL";	chr5	141550499	141550507	exon	assembly	-	gene_id "ENSG00000131504.15"; ID "255128"; transcript_id "transcript82906.chr5.nic"; exon "18"; exon_id "chr5.22745"; pos "mid"	0	0	0	0
chr5	142012251	142012427	+	repeat_id "MIRb,chr5,142012251,142012427";repeat_class "SINE";repeat_family "MIR";	chr5	142012288	142012339	exon	assembly	-	gene_id "ENSG00000113552.15"; ID "255522"; transcript_id "ENST00000500692.6"; exon "2"; exon_id "chr5.23123"; pos "mid"	0	0	0	0
chr5	142012251	142012427	+	repeat_id "MIRb,chr5,142012251,142012427";repeat_class "SINE";repeat_family "MIR";	chr5	142012288	142012377	exon	assembly	-	gene_id "ENSG00000113552.15"; ID "255531"; transcript_id "ENST00000503794.5"; exon "2"; exon_id "chr5.23126"; pos "mid"	0	0	0	0
chr5	149064028	149064222	+	repeat_id "L3,chr5,149064028,149064222";repeat_class "LINE";repeat_family "CR1";	chr5	149064067	149064174	exon	assembly	+	gene_id "ENSG00000250072.5"; ID "256962"; transcript_id "transcript87537.chr5.nnic"; exon "2"; exon_id "chr5.24384"; pos "mid"	0	0	0	0
chr5	149125342	149125788	-	repeat_id "LTR33,chr5,149125342,149125788";repeat_class "LTR";repeat_family "ERVL";	chr5	149125282	149125821	exon	assembly	+	gene_id "novel_gene_chr5_87586"; ID "256974"; transcript_id "transcript87585.chr5.nnic"; exon "1"; exon_id "chr5.24408"; pos "first"	0	0	167.977	0
chr5	149125342	149125788	-	repeat_id "LTR33,chr5,149125342,149125788";repeat_class "LTR";repeat_family "ERVL";	chr5	149125432	149125821	exon	assembly	+	gene_id "novel_gene_chr5_87568"; ID "256979"; transcript_id "transcript87567.chr5.nnic"; exon "1"; exon_id "chr5.24411"; pos "first"	0	0	167.977	0
chr5	149999793	150000082	-	repeat_id "L2,chr5,149999793,150000082";repeat_class "LINE";repeat_family "L2";	chr5	150000046	150000055	exon	assembly	+	gene_id "ENSG00000113716.12"; ID "257495"; transcript_id "ENST00000613459.4"; exon "1"; exon_id "chr5.24770"; pos "first"	0	0	0	0
chr5	151689424	151689486	-	repeat_id "Charlie4z,chr5,151689424,151689486";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	151689436	151689484	exon	assembly	-	gene_id "ENSG00000113140.10"; ID "258582"; transcript_id "transcript91220.chr5.nnic"; exon "1"; exon_id "chr5.25619"; pos "first"	0	0	0	0
chr5	154038305	154038498	+	repeat_id "MIR,chr5,154038305,154038498";repeat_class "SINE";repeat_family "MIR";	chr5	154038388	154038434	exon	assembly	-	gene_id "ENSG00000055147.18"; ID "258823"; transcript_id "ENST00000520667.5"; exon "2"; exon_id "chr5.25939"; pos "mid"	2.049	19.3249	0	0
chr5	154408781	154409327	-	repeat_id "MLT1K,chr5,154408781,154409327";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	154408749	154409089	exon	assembly	-	gene_id "ENSG00000245275.7"; ID "259016"; transcript_id "transcript93416.chr5.nnic"; exon "3"; exon_id "chr5.26059"; pos "last"	0	0	0	0
chr5	154408781	154409327	-	repeat_id "MLT1K,chr5,154408781,154409327";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	154408749	154409089	exon	assembly	-	gene_id "ENSG00000245275.7"; ID "259020"; transcript_id "transcript93417.chr5.nnic"; exon "3"; exon_id "chr5.26059"; pos "last"	0	0	0	0
chr5	154443206	154443515	+	repeat_id "AluSp,chr5,154443206,154443515";repeat_class "SINE";repeat_family "Alu";	chr5	154443362	154443480	exon	assembly	-	gene_id "ENSG00000245275.7"; ID "259015"; transcript_id "transcript93416.chr5.nnic"; exon "2"; exon_id "chr5.26055"; pos "mid"	0	0	0	0
chr5	154443206	154443515	+	repeat_id "AluSp,chr5,154443206,154443515";repeat_class "SINE";repeat_family "Alu";	chr5	154443362	154443480	exon	assembly	-	gene_id "ENSG00000245275.7"; ID "259019"; transcript_id "transcript93417.chr5.nnic"; exon "2"; exon_id "chr5.26055"; pos "mid"	0	0	0	0
chr5	154443206	154443515	+	repeat_id "AluSp,chr5,154443206,154443515";repeat_class "SINE";repeat_family "Alu";	chr5	154443362	154443480	exon	assembly	-	gene_id "ENSG00000245275.7"; ID "259027"; transcript_id "transcript93424.chr5.nnic"; exon "2"; exon_id "chr5.26055"; pos "mid"	0	0	0	0
chr5	160276113	160276444	+	repeat_id "AluSx,chr5,160276113,160276444";repeat_class "SINE";repeat_family "Alu";	chr5	160276269	160276412	exon	assembly	-	gene_id "ENSG00000135083.14"; ID "260188"; transcript_id "ENST00000393977.7"; exon "4"; exon_id "chr5.27178"; pos "mid"	0	0	0	0
chr5	160393515	160395702	-	repeat_id "Charlie11,chr5,160393515,160395702";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	160393148	160395539	exon	assembly	-	gene_id "ENSG00000221886.3"; ID "260238"; transcript_id "ENST00000408953.3"; exon "2"; exon_id "chr5.27229"; pos "last"	156.235	67.1283	36.4686	72.961
chr5	160393515	160395702	-	repeat_id "Charlie11,chr5,160393515,160395702";repeat_class "DNA";repeat_family "hAT-Charlie";	chr5	160393528	160395539	exon	assembly	-	gene_id "ENSG00000221886.3"; ID "260242"; transcript_id "ENST00000523213.1"; exon "3"; exon_id "chr5.27232"; pos "last"	156.235	67.1283	36.4686	72.961
chr5	160397418	160397873	-	repeat_id "L4_A_Mam,chr5,160397418,160397873";repeat_class "LINE";repeat_family "RTE-X";	chr5	160397442	160397515	exon	assembly	-	gene_id "ENSG00000221886.3"; ID "260241"; transcript_id "ENST00000523213.1"; exon "2"; exon_id "chr5.27231"; pos "mid"	0	0	0	0
chr5	176260995	176261305	-	repeat_id "AluSz,chr5,176260995,176261305";repeat_class "SINE";repeat_family "Alu";	chr5	176261028	176261149	exon	assembly	+	gene_id "ENSG00000170085.17"; ID "262389"; transcript_id "ENST00000443967.5"; exon "2"; exon_id "chr5.29378"; pos "mid"	0	0	0	0
chr5	176263326	176263707	-	repeat_id "MSTB,chr5,176263326,176263707";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr5	176263417	176263502	exon	assembly	+	gene_id "ENSG00000170085.17"; ID "262390"; transcript_id "ENST00000443967.5"; exon "3"; exon_id "chr5.29379"; pos "mid"	0	0	0	0
chr5	177515627	177515827	-	repeat_id "L3,chr5,177515627,177515827";repeat_class "LINE";repeat_family "CR1";	chr5	177515685	177515821	exon	assembly	-	gene_id "ENSG00000183258.11"; ID "263630"; transcript_id "ENST00000507955.5"; exon "6"; exon_id "chr5.30487"; pos "mid"	19.4655	35.5983	60.7811	33.5226
chr5	177515627	177515827	-	repeat_id "L3,chr5,177515627,177515827";repeat_class "LINE";repeat_family "CR1";	chr5	177515685	177515821	exon	assembly	-	gene_id "ENSG00000183258.11"; ID "263651"; transcript_id "ENST00000330503.11"; exon "5"; exon_id "chr5.30487"; pos "mid"	19.4655	35.5983	60.7811	33.5226
chr5	177952975	177953290	-	repeat_id "AluSg4,chr5,177952975,177953290";repeat_class "SINE";repeat_family "Alu";	chr5	177953163	177953292	exon	assembly	+	gene_id "ENSG00000249684.5"; ID "263856"; transcript_id "transcript109640.chr5.nnic"; exon "3"; exon_id "chr5.30864"; pos "mid"	0	0	0	0
chr5	178135141	178135422	-	repeat_id "AluJb,chr5,178135141,178135422";repeat_class "SINE";repeat_family "Alu";	chr5	178135173	178135312	exon	assembly	+	gene_id "ENSG00000145916.18"; ID "263987"; transcript_id "ENST00000515098.5"; exon "3"; exon_id "chr5.30981"; pos "mid"	0	0	0	0
chr5	179662949	179663259	-	repeat_id "AluSp,chr5,179662949,179663259";repeat_class "SINE";repeat_family "Alu";	chr5	179662975	179663103	exon	assembly	+	gene_id "ENSG00000250999.1"; ID "264715"; transcript_id "ENST00000514793.1"; exon "2"; exon_id "chr5.31609"; pos "mid"	0	0	0	0
chr5	181193200	181193734	+	repeat_id "LTR82A,chr5,181193200,181193734";repeat_class "LTR";repeat_family "ERVL";	chr5	181193342	181193467	exon	assembly	+	gene_id "ENSG00000250222.1"; ID "265543"; transcript_id "ENST00000508877.1"; exon "2"; exon_id "chr5.32506"; pos "mid"	55.3226	18.3078	0	70.9895
chr5	181240074	181240366	+	repeat_id "AluY,chr5,181240074,181240366";repeat_class "SINE";repeat_family "Alu";	chr5	181240216	181240327	exon	assembly	-	gene_id "ENSG00000204628.11"; ID "265640"; transcript_id "ENST00000508682.5"; exon "4"; exon_id "chr5.32561"; pos "mid"	61.4696	28.4786	35.3636	51.2701
chr5	181271547	181271843	-	repeat_id "AluSc8,chr5,181271547,181271843";repeat_class "SINE";repeat_family "Alu";	chr5	181271573	181271689	exon	assembly	+	gene_id "ENSG00000248275.1"; ID "265796"; transcript_id "ENST00000507434.1"; exon "2"; exon_id "chr5.32687"; pos "mid"	0	0	0	0
chr6	4427963	4428082	+	repeat_id "5S,chr6,4427963,4428082";repeat_class "rRNA";repeat_family "rRNA";	chr6	4427963	4428081	exon	assembly	+	gene_id "ENSG00000201185.1"; ID "267000"; transcript_id "ENST00000364315.1"; exon "1"; exon_id "chr6.856";	691.019	434.3	3119.74	2544.77
chr6	7296939	7297239	+	repeat_id "AluJb,chr6,7296939,7297239";repeat_class "SINE";repeat_family "Alu";	chr6	7296883	7297209	exon	assembly	-	gene_id "ENSG00000124783.12"; ID "267576"; transcript_id "ENST00000462112.1"; exon "7"; exon_id "chr6.1255"; pos "last"	0	16.7821	0	0
chr6	7347075	7349650	+	repeat_id "L1PB1,chr6,7347075,7349650";repeat_class "LINE";repeat_family "L1";	chr6	7347372	7347511	exon	assembly	-	gene_id "ENSG00000164304.15"; ID "267596"; transcript_id "transcript4679.chr6.nic"; exon "1"; exon_id "chr6.1269"; pos "first"	0	0	0	0
chr6	11802843	11803160	+	repeat_id "AluJr,chr6,11802843,11803160";repeat_class "SINE";repeat_family "Alu";	chr6	11803015	11803109	exon	assembly	-	gene_id "ENSG00000111863.12"; ID "268500"; transcript_id "transcript7790.chr6.nnic"; exon "2"; exon_id "chr6.2027"; pos "mid"	0	0	0	0
chr6	13329728	13329893	-	repeat_id "L2a,chr6,13329728,13329893";repeat_class "LINE";repeat_family "L2";	chr6	13329725	13329862	exon	assembly	+	gene_id "novel_gene_chr6_8509"; ID "268834"; transcript_id "transcript8508.chr6.nnic"; exon "2"; exon_id "chr6.2220"; pos "last"	0	0	0	0
chr6	26280711	26281501	-	repeat_id "L2a,chr6,26280711,26281501";repeat_class "LINE";repeat_family "L2";	chr6	26280899	26281587	exon	assembly	-	gene_id "ENSG00000158406.4"; ID "271804"; transcript_id "ENST00000634956.1"; exon "2"; exon_id "chr6.4221"; pos "mid"	0	0	0	0
chr6	27138224	27138815	-	repeat_id "LTR48B,chr6,27138224,27138815";repeat_class "LTR";repeat_family "ERV1";	chr6	27138293	27138681	exon	assembly	-	gene_id "novel_gene_chr6_16325"; ID "272376"; transcript_id "transcript16324.chr6.nnic"; exon "3"; exon_id "chr6.4592"; pos "last"	0	0	0	0
chr6	28122222	28122646	-	repeat_id "LTR7C,chr6,28122222,28122646";repeat_class "LTR";repeat_family "ERV1";	chr6	28122261	28122640	exon	assembly	-	gene_id "ENSG00000269293.2"; ID "272891"; transcript_id "transcript17301.chr6.nnic"; exon "3"; exon_id "chr6.4861"; pos "last"	0	0	0	0
chr6	28123063	28123232	+	repeat_id "FRAM,chr6,28123063,28123232";repeat_class "SINE";repeat_family "Alu";	chr6	28123084	28123211	exon	assembly	-	gene_id "ENSG00000269293.2"; ID "272890"; transcript_id "transcript17301.chr6.nnic"; exon "2"; exon_id "chr6.4860"; pos "mid"	21.5145	39.1582	53.0455	0
chr6	28571601	28574290	-	repeat_id "Charlie10,chr6,28571601,28574290";repeat_class "DNA";repeat_family "hAT-Charlie";	chr6	28571630	28573827	exon	assembly	-	gene_id "ENSG00000232040.2"; ID "273328"; transcript_id "ENST00000452236.2"; exon "4"; exon_id "chr6.5153"; pos "last"	34.3208	0	0	0
chr6	30296052	30296310	-	repeat_id "MLT1I,chr6,30296052,30296310";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr6	30296132	30296237	exon	assembly	-	gene_id "ENSG00000231074.8"; ID "274128"; transcript_id "ENST00000438412.5"; exon "2"; exon_id "chr6.5895"; pos "mid"	39.4432	16.7821	40.8891	0
chr6	30296052	30296310	-	repeat_id "MLT1I,chr6,30296052,30296310";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr6	30296132	30296237	exon	assembly	-	gene_id "ENSG00000231074.8"; ID "274139"; transcript_id "ENST00000412685.6"; exon "3"; exon_id "chr6.5895"; pos "mid"	39.4432	16.7821	40.8891	0
chr6	30561053	30561753	+	repeat_id "L1ME3A,chr6,30561053,30561753";repeat_class "LINE";repeat_family "L1";	chr6	30561328	30561765	exon	assembly	+	gene_id "ENSG00000204576.11"; ID "274351"; transcript_id "transcript21399.chr6.nic"; exon "2"; exon_id "chr6.6079"; pos "last"	17.9288	36.6152	0	65.0737
chr6	30667600	30668364	+	repeat_id "L1MC5a,chr6,30667600,30668364";repeat_class "LINE";repeat_family "L1";	chr6	30668022	30668208	exon	assembly	-	gene_id "ENSG00000204560.9"; ID "274697"; transcript_id "transcript21961.chr6.nnic"; exon "5"; exon_id "chr6.6238"; pos "last"	0	0	0	0
chr6	31836273	31836535	-	repeat_id "AluJr,chr6,31836273,31836535";repeat_class "SINE";repeat_family "Alu";	chr6	31836424	31836517	exon	assembly	+	gene_id "ENSG00000204387.12"; ID "276466"; transcript_id "transcript29245.chr6.nic"; exon "3"; exon_id "chr6.7788"; pos "mid"	21.0023	0	0	0
chr6	31836273	31836535	-	repeat_id "AluJr,chr6,31836273,31836535";repeat_class "SINE";repeat_family "Alu";	chr6	31836424	31836517	exon	assembly	+	gene_id "ENSG00000204387.12"; ID "276485"; transcript_id "ENST00000375638.7"; exon "3"; exon_id "chr6.7788"; pos "mid"	21.0023	0	0	0
chr6	33284644	33285000	+	repeat_id "Cheshire,chr6,33284644,33285000";repeat_class "DNA";repeat_family "hAT-Charlie";	chr6	33284804	33285009	exon	assembly	-	gene_id "ENSG00000227057.9"; ID "277982"; transcript_id "transcript32476.chr6.nnic"; exon "11"; exon_id "chr6.9492"; pos "last"	0	0	0	0
chr6	42234329	42234640	-	repeat_id "AluSc,chr6,42234329,42234640";repeat_class "SINE";repeat_family "Alu";	chr6	42234360	42234500	exon	assembly	+	gene_id "novel_gene_chr6_46193"; ID "282049"; transcript_id "transcript46192.chr6.nnic"; exon "2"; exon_id "chr6.12740"; pos "mid"	0	0	0	0
chr6	43611774	43612086	+	repeat_id "AluSq2,chr6,43611774,43612086";repeat_class "SINE";repeat_family "Alu";	chr6	43611761	43612095	exon	assembly	+	gene_id "ENSG00000170734.11"; ID "283648"; transcript_id "transcript49656.chr6.nnic"; exon "11"; exon_id "chr6.13650"; pos "last"	0	0	0	0
chr6	43633173	43633471	-	repeat_id "AluSp,chr6,43633173,43633471";repeat_class "SINE";repeat_family "Alu";	chr6	43633194	43633315	exon	assembly	+	gene_id "ENSG00000124688.13"; ID "283719"; transcript_id "ENST00000451025.6"; exon "2"; exon_id "chr6.13679"; pos "mid"	0	0	0	0
chr6	82175748	82176042	+	repeat_id "AluSp,chr6,82175748,82176042";repeat_class "SINE";repeat_family "Alu";	chr6	82175904	82176026	exon	assembly	-	gene_id "ENSG00000005700.14"; ID "289714"; transcript_id "transcript69414.chr6.nnic"; exon "4"; exon_id "chr6.18519"; pos "mid"	0	0	0	0
chr6	83165423	83166685	-	repeat_id "HSMAR1,chr6,83165423,83166685";repeat_class "DNA";repeat_family "TcMar-Mariner";	chr6	83165479	83166524	exon	assembly	-	gene_id "ENSG00000013375.15"; ID "290043"; transcript_id "transcript69951.chr6.nnic"; exon "14"; exon_id "chr6.18705"; pos "last"	70.6901	71.197	0	0
chr6	84778471	84778762	+	repeat_id "AluJr,chr6,84778471,84778762";repeat_class "SINE";repeat_family "Alu";	chr6	84778493	84778742	exon	assembly	-	gene_id "novel_gene_chr6_70869"; ID "290554"; transcript_id "transcript70868.chr6.nnic"; exon "2"; exon_id "chr6.19012"; pos "mid"	0	0	0	0
chr6	99382984	99383153	+	repeat_id "AluSq2,chr6,99382984,99383153";repeat_class "SINE";repeat_family "Alu";	chr6	99383008	99383130	exon	assembly	-	gene_id "ENSG00000132423.11"; ID "292791"; transcript_id "transcript77164.chr6.nic"; exon "3"; exon_id "chr6.20578"; pos "mid"	0	0	17.6818	0
chr6	104782208	104782511	+	repeat_id "AluJb,chr6,104782208,104782511";repeat_class "SINE";repeat_family "Alu";	chr6	104782363	104782455	exon	assembly	-	gene_id "ENSG00000085382.11"; ID "293408"; transcript_id "ENST00000517995.5"; exon "1"; exon_id "chr6.20972"; pos "first"	0	0	0	0
chr6	107029915	107030123	+	repeat_id "L2a,chr6,107029915,107030123";repeat_class "LINE";repeat_family "L2";	chr6	107030025	107030107	exon	assembly	+	gene_id "ENSG00000130349.9"; ID "294003"; transcript_id "ENST00000625458.1"; exon "2"; exon_id "chr6.21372"; pos "mid"	0	0	0	32.5367
chr6	109140401	109140695	-	repeat_id "AluSg,chr6,109140401,109140695";repeat_class "SINE";repeat_family "Alu";	chr6	109140421	109140675	exon	assembly	+	gene_id "ENSG00000183137.14"; ID "294658"; transcript_id "transcript82436.chr6.nic"; exon "2"; exon_id "chr6.21811"; pos "mid"	33.2963	0	0	0
chr6	111307797	111308242	-	repeat_id "L1PA6,chr6,111307797,111308242";repeat_class "LINE";repeat_family "L1";	chr6	111308014	111308245	exon	assembly	-	gene_id "ENSG00000009413.15"; ID "295763"; transcript_id "ENST00000462119.5"; exon "5"; exon_id "chr6.22517"; pos "mid"	0	0	0	0
chr6	116241166	116241641	+	repeat_id "L1MEg,chr6,116241166,116241641";repeat_class "LINE";repeat_family "L1";	chr6	116241245	116241310	exon	assembly	+	gene_id "ENSG00000178425.13"; ID "296649"; transcript_id "transcript86810.chr6.nnic"; exon "12"; exon_id "chr6.23285"; pos "mid"	0	0	0	0
chr6	116574039	116574376	-	repeat_id "MamRTE1,chr6,116574039,116574376";repeat_class "LINE";repeat_family "RTE-BovB";	chr6	116574058	116574171	exon	assembly	+	gene_id "ENSG00000111832.12"; ID "296874"; transcript_id "ENST00000487832.6"; exon "2"; exon_id "chr6.23421"; pos "mid"	0	0	0	0
chr6	125082371	125082554	-	repeat_id "MIR,chr6,125082371,125082554";repeat_class "SINE";repeat_family "MIR";	chr6	125082449	125082563	exon	assembly	+	gene_id "ENSG00000146373.16"; ID "298159"; transcript_id "ENST00000560949.5"; exon "6"; exon_id "chr6.24349"; pos "mid"	0	0	0	0
chr6	127282230	127282519	+	repeat_id "L2,chr6,127282230,127282519";repeat_class "LINE";repeat_family "L2";	chr6	127282287	127282395	exon	assembly	+	gene_id "ENSG00000118518.15"; ID "298550"; transcript_id "transcript91482.chr6.nic"; exon "3"; exon_id "chr6.24646"; pos "mid"	0	128.662	0	36.4805
chr6	130049728	130050071	+	repeat_id "L2-1_AMi,chr6,130049728,130050071";repeat_class "LINE";repeat_family "L2";	chr6	130049756	130049830	exon	assembly	+	gene_id "ENSG00000198945.7"; ID "299063"; transcript_id "ENST00000529410.5"; exon "7"; exon_id "chr6.25118"; pos "mid"	0	45.2607	0	0
chr6	130049728	130050071	+	repeat_id "L2-1_AMi,chr6,130049728,130050071";repeat_class "LINE";repeat_family "L2";	chr6	130049756	130049830	exon	assembly	+	gene_id "ENSG00000198945.7"; ID "299178"; transcript_id "ENST00000368136.2"; exon "5"; exon_id "chr6.25118"; pos "mid"	0	45.2607	0	0
chr6	132457258	132458774	-	repeat_id "Charlie16,chr6,132457258,132458774";repeat_class "DNA";repeat_family "hAT-Charlie";	chr6	132457915	132458599	exon	assembly	-	gene_id "ENSG00000079950.13"; ID "299772"; transcript_id "transcript94044.chr6.nnic"; exon "2"; exon_id "chr6.25634"; pos "last"	0	0	0	0
chr6	133968667	133968960	-	repeat_id "AluSx1,chr6,133968667,133968960";repeat_class "SINE";repeat_family "Alu";	chr6	133968855	133968957	exon	assembly	+	gene_id "ENSG00000028839.9"; ID "299880"; transcript_id "transcript94360.chr6.nic"; exon "2"; exon_id "chr6.25866"; pos "mid"	0	0	0	0
chr6	143446716	143446922	+	repeat_id "MIRb,chr6,143446716,143446922";repeat_class "SINE";repeat_family "MIR";	chr6	143446835	143446898	exon	assembly	-	gene_id "ENSG00000189007.15"; ID "301910"; transcript_id "transcript99769.chr6.nnic"; exon "2"; exon_id "chr6.27418"; pos "mid"	18.9533	6.61115	80.6734	0
chr6	143446716	143446922	+	repeat_id "MIRb,chr6,143446716,143446922";repeat_class "SINE";repeat_family "MIR";	chr6	143446835	143446898	exon	assembly	-	gene_id "ENSG00000189007.15"; ID "301915"; transcript_id "transcript99809.chr6.nnic"; exon "2"; exon_id "chr6.27418"; pos "mid"	18.9533	6.61115	80.6734	0
chr6	145828162	145828539	+	repeat_id "THE1C,chr6,145828162,145828539";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr6	145828361	145828420	exon	assembly	+	gene_id "ENSG00000235652.7"; ID "302619"; transcript_id "ENST00000606388.5"; exon "2"; exon_id "chr6.27958"; pos "mid"	0	0	0	0
chr6	149857082	149857249	+	repeat_id "LTR8,chr6,149857082,149857249";repeat_class "LTR";repeat_family "ERV1";	chr6	149857141	149857262	exon	assembly	-	gene_id "ENSG00000120256.9"; ID "303772"; transcript_id "transcript104479.chr6.nnic"; exon "1"; exon_id "chr6.28758"; pos "first"	0	0	0	0
chr6	149895778	149896107	-	repeat_id "MLT1A0,chr6,149895778,149896107";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr6	149895846	149896059	exon	assembly	-	gene_id "ENSG00000164520.11"; ID "303891"; transcript_id "ENST00000532335.5"; exon "1"; exon_id "chr6.28806"; pos "first"	16.9043	0	0	100.568
chr6	149895778	149896107	-	repeat_id "MLT1A0,chr6,149895778,149896107";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr6	149895846	149896162	exon	assembly	-	gene_id "ENSG00000164520.11"; ID "303877"; transcript_id "transcript104520.chr6.nnic"; exon "1"; exon_id "chr6.28798"; pos "first"	16.9043	0	0	100.568
chr6	149916791	149917731	-	repeat_id "LTR13_,chr6,149916791,149917731";repeat_class "LTR";repeat_family "ERVK";	chr6	149916878	149917074	exon	assembly	-	gene_id "ENSG00000203722.7"; ID "303915"; transcript_id "ENST00000367360.6"; exon "5"; exon_id "chr6.28818"; pos "last"	0	0	0	0
chr7	1136724	1137469	+	repeat_id "L2a,chr7,1136724,1137469";repeat_class "LINE";repeat_family "L2";	chr7	1137315	1137404	exon	assembly	-	gene_id "ENSG00000146540.14"; ID "308823"; transcript_id "transcript854.chr7.nnic"; exon "2"; exon_id "chr7.366"; pos "mid"	16.9043	23.3933	0	0
chr7	1574607	1574861	-	repeat_id "Tigger18a,chr7,1574607,1574861";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr7	1574715	1574863	exon	assembly	+	gene_id "ENSG00000230487.7"; ID "309160"; transcript_id "transcript1436.chr7.nic"; exon "2"; exon_id "chr7.667"; pos "mid"	16.9043	0	72.9375	32.5367
chr7	1938358	1938711	+	repeat_id "L1M5,chr7,1938358,1938711";repeat_class "LINE";repeat_family "L1";	chr7	1938437	1938608	exon	assembly	-	gene_id "ENSG00000002822.15"; ID "309245"; transcript_id "transcript1681.chr7.nnic"; exon "1"; exon_id "chr7.721"; pos "first"	0	0	0	0
chr7	2230470	2230994	-	repeat_id "Ricksha_c,chr7,2230470,2230994";repeat_class "DNA";repeat_family "MULE-MuDR";	chr7	2230549	2230724	exon	assembly	-	gene_id "ENSG00000002822.15"; ID "309174"; transcript_id "ENST00000406869.5"; exon "2"; exon_id "chr7.701"; pos "mid"	21.5144	121.034	37.5737	194.235
chr7	2230470	2230994	-	repeat_id "Ricksha_c,chr7,2230470,2230994";repeat_class "DNA";repeat_family "MULE-MuDR";	chr7	2230549	2230724	exon	assembly	-	gene_id "ENSG00000002822.15"; ID "309194"; transcript_id "transcript1548.chr7.nic"; exon "2"; exon_id "chr7.701"; pos "mid"	21.5144	121.034	37.5737	194.235
chr7	2230470	2230994	-	repeat_id "Ricksha_c,chr7,2230470,2230994";repeat_class "DNA";repeat_family "MULE-MuDR";	chr7	2230549	2230764	exon	assembly	-	gene_id "ENSG00000002822.15"; ID "309274"; transcript_id "ENST00000399654.6"; exon "2"; exon_id "chr7.725"; pos "mid"	21.5144	121.034	37.5737	194.235
chr7	2242639	2243393	-	repeat_id "LTR1,chr7,2242639,2243393";repeat_class "LTR";repeat_family "ERV1";	chr7	2242905	2242975	exon	assembly	+	gene_id "ENSG00000106268.15"; ID "309386"; transcript_id "ENST00000339737.6"; exon "1"; exon_id "chr7.763"; pos "first"	99.3756	6.61115	0	80.8489
chr7	2242639	2243393	-	repeat_id "LTR1,chr7,2242639,2243393";repeat_class "LTR";repeat_family "ERV1";	chr7	2242905	2243048	exon	assembly	+	gene_id "ENSG00000106268.15"; ID "309397"; transcript_id "ENST00000343985.8"; exon "1"; exon_id "chr7.766"; pos "first"	99.3756	6.61115	0	80.8489
chr7	2242639	2243393	-	repeat_id "LTR1,chr7,2242639,2243393";repeat_class "LTR";repeat_family "ERV1";	chr7	2242925	2242975	exon	assembly	+	gene_id "ENSG00000106268.15"; ID "309376"; transcript_id "ENST00000397046.5"; exon "2"; exon_id "chr7.758"; pos "mid"	99.3756	6.61115	0	80.8489
chr7	2242639	2243393	-	repeat_id "LTR1,chr7,2242639,2243393";repeat_class "LTR";repeat_family "ERV1";	chr7	2242925	2243048	exon	assembly	+	gene_id "ENSG00000106268.15"; ID "309392"; transcript_id "ENST00000397048.5"; exon "2"; exon_id "chr7.765"; pos "mid"	99.3756	6.61115	0	80.8489
chr7	7215068	7216893	-	repeat_id "HUERS-P3b-int,chr7,7215068,7216893";repeat_class "LTR";repeat_family "ERV1";	chr7	7215042	7215239	exon	assembly	+	gene_id "ENSG00000106392.10"; ID "312041"; transcript_id "transcript10281.chr7.nnic"; exon "2"; exon_id "chr7.2766"; pos "mid"	0	0	0	0
chr7	7555052	7555240	+	repeat_id "MIR,chr7,7555052,7555240";repeat_class "SINE";repeat_family "MIR";	chr7	7555156	7555189	exon	assembly	-	gene_id "ENSG00000272894.5"; ID "312119"; transcript_id "ENST00000609497.5"; exon "2"; exon_id "chr7.2858"; pos "mid"	13.8308	0	0	0
chr7	12213804	12214710	+	repeat_id "MER4D,chr7,12213804,12214710";repeat_class "LTR";repeat_family "ERV1";	chr7	12214201	12214394	exon	assembly	+	gene_id "ENSG00000106460.18"; ID "312551"; transcript_id "ENST00000396667.7"; exon "2"; exon_id "chr7.3312"; pos "mid"	0	0	0	0
chr7	17020196	17020731	+	repeat_id "L1MA10,chr7,17020196,17020731";repeat_class "LINE";repeat_family "L1";	chr7	17020268	17020457	exon	assembly	+	gene_id "novel_gene_chr7_13583"; ID "313431"; transcript_id "transcript13582.chr7.nnic"; exon "2"; exon_id "chr7.3949"; pos "mid"	0	0	0	0
chr7	17020196	17020731	+	repeat_id "L1MA10,chr7,17020196,17020731";repeat_class "LINE";repeat_family "L1";	chr7	17020268	17020457	exon	assembly	+	gene_id "novel_gene_chr7_13589"; ID "313421"; transcript_id "transcript13588.chr7.nnic"; exon "2"; exon_id "chr7.3949"; pos "mid"	0	0	0	0
chr7	19966604	19968396	+	repeat_id "L2a,chr7,19966604,19968396";repeat_class "LINE";repeat_family "L2";	chr7	19968137	19968395	exon	assembly	-	gene_id "ENSG00000243004.5"; ID "313959"; transcript_id "ENST00000449573.5"; exon "2"; exon_id "chr7.4346"; pos "mid"	0	0	0	0
chr7	22817412	22817553	-	repeat_id "FLAM_C,chr7,22817412,22817553";repeat_class "SINE";repeat_family "Alu";	chr7	22817412	22817548	exon	assembly	-	gene_id "ENSG00000196683.10"; ID "314358"; transcript_id "ENST00000372879.8"; exon "3"; exon_id "chr7.4824"; pos "mid"	21.0023	0	0	0
chr7	23101214	23103420	+	repeat_id "Tigger1,chr7,23101214,23103420";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr7	23101228	23103578	exon	assembly	-	gene_id "ENSG00000230658.1"; ID "314508"; transcript_id "ENST00000419813.1"; exon "3"; exon_id "chr7.4914"; pos "last"	0	0	0	0
chr7	27539653	27542304	-	repeat_id "Tigger2,chr7,27539653,27542304";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr7	27539881	27541755	exon	assembly	-	gene_id "ENSG00000106049.8"; ID "315857"; transcript_id "transcript23597.chr7.nnic"; exon "6"; exon_id "chr7.5972"; pos "last"	0	17.7992	0	0
chr7	30576832	30578376	-	repeat_id "LOR1-int,chr7,30576832,30578376";repeat_class "LTR";repeat_family "ERV1";	chr7	30577512	30578091	exon	assembly	-	gene_id "ENSG00000196295.11"; ID "316778"; transcript_id "transcript26293.chr7.nnic"; exon "5"; exon_id "chr7.6634"; pos "last"	17.4165	37.6327	0	0
chr7	30576832	30578376	-	repeat_id "LOR1-int,chr7,30576832,30578376";repeat_class "LTR";repeat_family "ERV1";	chr7	30577515	30578091	exon	assembly	-	gene_id "ENSG00000196295.11"; ID "316783"; transcript_id "transcript26352.chr7.nic"; exon "4"; exon_id "chr7.6645"; pos "last"	17.4165	37.6327	0	0
chr7	30578716	30579158	-	repeat_id "HERV4_I-int,chr7,30578716,30579158";repeat_class "LTR";repeat_family "ERV1";	chr7	30579006	30579128	exon	assembly	-	gene_id "ENSG00000196295.11"; ID "316782"; transcript_id "transcript26352.chr7.nic"; exon "3"; exon_id "chr7.6644"; pos "mid"	0	0	0	0
chr7	30585199	30585502	+	repeat_id "AluSx,chr7,30585199,30585502";repeat_class "SINE";repeat_family "Alu";	chr7	30585330	30585479	exon	assembly	-	gene_id "ENSG00000196295.11"; ID "316776"; transcript_id "transcript26293.chr7.nnic"; exon "3"; exon_id "chr7.6630"; pos "mid"	75.3006	6.61111	0	0
chr7	30593687	30593833	-	repeat_id "Zaphod,chr7,30593687,30593833";repeat_class "DNA";repeat_family "hAT-Tip100";	chr7	30593730	30593771	exon	assembly	-	gene_id "ENSG00000196295.11"; ID "316775"; transcript_id "transcript26293.chr7.nnic"; exon "2"; exon_id "chr7.6642"; pos "mid"	0	0	0	0
chr7	32933585	32933880	-	repeat_id "AluSx3,chr7,32933585,32933880";repeat_class "SINE";repeat_family "Alu";	chr7	32933814	32933896	exon	assembly	-	gene_id "ENSG00000205763.13"; ID "317337"; transcript_id "transcript27566.chr7.nnic"; exon "2"; exon_id "chr7.7213"; pos "mid"	0	0	0	0
chr7	32933585	32933880	-	repeat_id "AluSx3,chr7,32933585,32933880";repeat_class "SINE";repeat_family "Alu";	chr7	32933814	32933896	exon	assembly	-	gene_id "ENSG00000205763.13"; ID "317356"; transcript_id "transcript27719.chr7.nnic"; exon "2"; exon_id "chr7.7213"; pos "mid"	0	0	0	0
chr7	32933585	32933880	-	repeat_id "AluSx3,chr7,32933585,32933880";repeat_class "SINE";repeat_family "Alu";	chr7	32933814	32933896	exon	assembly	-	gene_id "ENSG00000205763.13"; ID "317361"; transcript_id "ENST00000381639.3"; exon "2"; exon_id "chr7.7213"; pos "mid"	0	0	0	0
chr7	40810257	40816712	-	repeat_id "L1PA16,chr7,40810257,40816712";repeat_class "LINE";repeat_family "L1";	chr7	40815655	40815803	exon	assembly	+	gene_id "ENSG00000175600.15"; ID "318717"; transcript_id "transcript31476.chr7.nnic"; exon "1"; exon_id "chr7.8490"; pos "first"	329.887	33.564	38.6789	0
chr7	40818764	40822562	-	repeat_id "L1PA5,chr7,40818764,40822562";repeat_class "LINE";repeat_family "L1";	chr7	40821250	40821406	exon	assembly	+	gene_id "ENSG00000175600.15"; ID "318718"; transcript_id "transcript31476.chr7.nnic"; exon "2"; exon_id "chr7.8491"; pos "mid"	0	0	47.5197	0
chr7	42931018	42931166	+	repeat_id "MIRc,chr7,42931018,42931166";repeat_class "SINE";repeat_family "MIR";	chr7	42931096	42931155	exon	assembly	-	gene_id "ENSG00000106588.10"; ID "318989"; transcript_id "ENST00000436986.5"; exon "2"; exon_id "chr7.8654"; pos "mid"	0	0	0	0
chr7	43665576	43665927	-	repeat_id "THE1D,chr7,43665576,43665927";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	43665658	43665722	exon	assembly	-	gene_id "ENSG00000106603.18"; ID "319058"; transcript_id "transcript32730.chr7.nic"; exon "2"; exon_id "chr7.8797"; pos "mid"	0	0	0	109.442
chr7	43759989	43760198	-	repeat_id "AluSc,chr7,43759989,43760198";repeat_class "SINE";repeat_family "Alu";	chr7	43760017	43760110	exon	assembly	+	gene_id "ENSG00000106605.10"; ID "319145"; transcript_id "ENST00000402924.5"; exon "2"; exon_id "chr7.8859"; pos "mid"	0	0	0	0
chr7	43887717	43888174	+	repeat_id "L1ME4a,chr7,43887717,43888174";repeat_class "LINE";repeat_family "L1";	chr7	43887790	43887816	exon	assembly	-	gene_id "ENSG00000106608.16"; ID "319175"; transcript_id "ENST00000453200.5"; exon "2"; exon_id "chr7.8884"; pos "mid"	79.9106	53.906	80.6734	79.8628
chr7	43887717	43888174	+	repeat_id "L1ME4a,chr7,43887717,43888174";repeat_class "LINE";repeat_family "L1";	chr7	43887790	43887816	exon	assembly	-	gene_id "ENSG00000106608.16"; ID "319182"; transcript_id "transcript33569.chr7.nic"; exon "2"; exon_id "chr7.8884"; pos "mid"	79.9106	53.906	80.6734	79.8628
chr7	44013514	44013897	-	repeat_id "MSTA,chr7,44013514,44013897";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	44013593	44013679	exon	assembly	-	gene_id "ENSG00000214783.9"; ID "319325"; transcript_id "ENST00000427076.5"; exon "4"; exon_id "chr7.8928"; pos "mid"	39.9552	3.0513	5.52555	12.8175
chr7	44618709	44618999	+	repeat_id "MER39,chr7,44618709,44618999";repeat_class "LTR";repeat_family "ERV1";	chr7	44618824	44618934	exon	assembly	+	gene_id "ENSG00000105953.14"; ID "320001"; transcript_id "transcript35825.chr7.nnic"; exon "2"; exon_id "chr7.9581"; pos "mid"	0	0	0	0
chr7	44618794	44619481	+	repeat_id "MER21A,chr7,44618794,44619481";repeat_class "LTR";repeat_family "ERVL";	chr7	44618824	44618934	exon	assembly	+	gene_id "ENSG00000105953.14"; ID "320001"; transcript_id "transcript35825.chr7.nnic"; exon "2"; exon_id "chr7.9581"; pos "mid"	0	0	0	0
chr7	44795116	44795425	-	repeat_id "AluSx,chr7,44795116,44795425";repeat_class "SINE";repeat_family "Alu";	chr7	44795207	44795405	exon	assembly	+	gene_id "ENSG00000196262.13"; ID "320149"; transcript_id "transcript36070.chr7.nnic"; exon "1"; exon_id "chr7.9661"; pos "first"	0	0	0	0
chr7	44800399	44800695	-	repeat_id "AluSz,chr7,44800399,44800695";repeat_class "SINE";repeat_family "Alu";	chr7	44800424	44800543	exon	assembly	+	gene_id "ENSG00000196262.13"; ID "320160"; transcript_id "ENST00000415933.5"; exon "5"; exon_id "chr7.9668"; pos "mid"	3.07347	0	0	0
chr7	44988662	44989374	-	repeat_id "LTR8,chr7,44988662,44989374";repeat_class "LTR";repeat_family "ERV1";	chr7	44988766	44989017	exon	assembly	-	gene_id "novel_gene_chr7_37610"; ID "320387"; transcript_id "transcript37609.chr7.nnic"; exon "4"; exon_id "chr7.9842"; pos "last"	0	0	0	0
chr7	45726259	45726767	-	repeat_id "MER9a2,chr7,45726259,45726767";repeat_class "LTR";repeat_family "ERVK";	chr7	45726333	45726861	exon	assembly	-	gene_id "ENSG00000214765.8"; ID "320654"; transcript_id "transcript38106.chr7.nnic"; exon "11"; exon_id "chr7.10026"; pos "last"	0	0	0	59.1578
chr7	45756916	45756999	-	repeat_id "LTR84b,chr7,45756916,45756999";repeat_class "LTR";repeat_family "ERVL";	chr7	45756909	45756992	exon	assembly	-	gene_id "ENSG00000214765.8"; ID "320647"; transcript_id "transcript38106.chr7.nnic"; exon "4"; exon_id "chr7.10016"; pos "mid"	0	0	0	0
chr7	50448120	50448276	-	repeat_id "MIR,chr7,50448120,50448276";repeat_class "SINE";repeat_family "MIR";	chr7	50448181	50448289	exon	assembly	-	gene_id "ENSG00000132436.11"; ID "321384"; transcript_id "transcript39167.chr7.nic"; exon "3"; exon_id "chr7.10695"; pos "mid"	0	39.6665	0	0
chr7	50448120	50448276	-	repeat_id "MIR,chr7,50448120,50448276";repeat_class "SINE";repeat_family "MIR";	chr7	50448181	50448289	exon	assembly	-	gene_id "ENSG00000132436.11"; ID "321398"; transcript_id "ENST00000395556.6"; exon "3"; exon_id "chr7.10695"; pos "mid"	0	39.6665	0	0
chr7	50448120	50448276	-	repeat_id "MIR,chr7,50448120,50448276";repeat_class "SINE";repeat_family "MIR";	chr7	50448181	50448289	exon	assembly	-	gene_id "ENSG00000132436.11"; ID "321402"; transcript_id "ENST00000615084.4"; exon "2"; exon_id "chr7.10695"; pos "mid"	0	39.6665	0	0
chr7	50448120	50448276	-	repeat_id "MIR,chr7,50448120,50448276";repeat_class "SINE";repeat_family "MIR";	chr7	50448181	50448289	exon	assembly	-	gene_id "ENSG00000132436.11"; ID "321407"; transcript_id "ENST00000433017.5"; exon "3"; exon_id "chr7.10695"; pos "mid"	0	39.6665	0	0
chr7	65720447	65722121	-	repeat_id "L1PA4,chr7,65720447,65722121";repeat_class "LINE";repeat_family "L1";	chr7	65720425	65722124	exon	assembly	-	gene_id "ENSG00000272693.3"; ID "322579"; transcript_id "transcript43733.chr7.nnic"; exon "4"; exon_id "chr7.12109"; pos "last"	0	0	0	0
chr7	66209836	66209967	-	repeat_id "AluJr,chr7,66209836,66209967";repeat_class "SINE";repeat_family "Alu";	chr7	66209853	66209904	exon	assembly	+	gene_id "ENSG00000169902.13"; ID "323038"; transcript_id "transcript44992.chr7.nnic"; exon "2"; exon_id "chr7.12368"; pos "mid"	0	0	0	0
chr7	66490458	66490536	+	repeat_id "AluJb,chr7,66490458,66490536";repeat_class "SINE";repeat_family "Alu";	chr7	66490454	66490511	exon	assembly	+	gene_id "ENSG00000234500.1"; ID "323154"; transcript_id "transcript45430.chr7.nnic"; exon "2"; exon_id "chr7.12425"; pos "mid"	0	0	0	0
chr7	66711884	66712472	-	repeat_id "L1MD,chr7,66711884,66712472";repeat_class "LINE";repeat_family "L1";	chr7	66712167	66712224	exon	assembly	+	gene_id "ENSG00000154710.16"; ID "323361"; transcript_id "ENST00000607882.5"; exon "2"; exon_id "chr7.12587"; pos "mid"	56.8594	0	39.784	0
chr7	66768566	66769283	-	repeat_id "L1MD2,chr7,66768566,66769283";repeat_class "LINE";repeat_family "L1";	chr7	66768831	66769025	exon	assembly	+	gene_id "ENSG00000154710.16"; ID "323387"; transcript_id "ENST00000450873.6"; exon "2"; exon_id "chr7.12591"; pos "mid"	8.196	0	0	0
chr7	77795238	77795524	+	repeat_id "AluJb,chr7,77795238,77795524";repeat_class "SINE";repeat_family "Alu";	chr7	77795393	77795512	exon	assembly	-	gene_id "ENSG00000135211.5"; ID "327259"; transcript_id "transcript60099.chr7.nnic"; exon "2"; exon_id "chr7.15681"; pos "mid"	0	0	0	0
chr7	77795238	77795524	+	repeat_id "AluJb,chr7,77795238,77795524";repeat_class "SINE";repeat_family "Alu";	chr7	77795435	77795512	exon	assembly	-	gene_id "ENSG00000135211.5"; ID "327263"; transcript_id "transcript60100.chr7.nnic"; exon "2"; exon_id "chr7.15682"; pos "mid"	0	0	0	0
chr7	87323384	87326725	-	repeat_id "LTR25-int,chr7,87323384,87326725";repeat_class "LTR";repeat_family "ERV1";	chr7	87325299	87325444	exon	assembly	-	gene_id "ENSG00000182165.17"; ID "328099"; transcript_id "ENST00000416560.5"; exon "4"; exon_id "chr7.16712"; pos "last"	18.441	0	0	0
chr7	87323384	87326725	-	repeat_id "LTR25-int,chr7,87323384,87326725";repeat_class "LTR";repeat_family "ERV1";	chr7	87325350	87325444	exon	assembly	-	gene_id "ENSG00000182165.17"; ID "328103"; transcript_id "ENST00000421293.1"; exon "3"; exon_id "chr7.16714"; pos "last"	18.441	0	0	0
chr7	87323384	87326725	-	repeat_id "LTR25-int,chr7,87323384,87326725";repeat_class "LTR";repeat_family "ERV1";	chr7	87325350	87325444	exon	assembly	-	gene_id "ENSG00000182165.17"; ID "328107"; transcript_id "ENST00000432193.5"; exon "3"; exon_id "chr7.16714"; pos "last"	18.441	0	0	0
chr7	90350490	90351667	-	repeat_id "Tigger2,chr7,90350490,90351667";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr7	90350868	90351119	exon	assembly	+	gene_id "ENSG00000105793.15"; ID "328398"; transcript_id "transcript62658.chr7.nnic"; exon "2"; exon_id "chr7.17224"; pos "mid"	0	0	0	0
chr7	91800382	91801955	-	repeat_id "MER52A,chr7,91800382,91801955";repeat_class "LTR";repeat_family "ERV1";	chr7	91800998	91801268	exon	assembly	-	gene_id "ENSG00000127989.13"; ID "328774"; transcript_id "transcript63164.chr7.nnic"; exon "5"; exon_id "chr7.17438"; pos "last"	0	0	0	0
chr7	91802327	91802621	+	repeat_id "AluSg,chr7,91802327,91802621";repeat_class "SINE";repeat_family "Alu";	chr7	91802482	91802599	exon	assembly	-	gene_id "ENSG00000127989.13"; ID "328773"; transcript_id "transcript63164.chr7.nnic"; exon "4"; exon_id "chr7.17437"; pos "mid"	0	18.3078	0	0
chr7	99377308	99377611	-	repeat_id "AluSx,chr7,99377308,99377611";repeat_class "SINE";repeat_family "Alu";	chr7	99377338	99377439	exon	assembly	+	gene_id "ENSG00000130429.12"; ID "331383"; transcript_id "ENST00000451682.5"; exon "3"; exon_id "chr7.19507"; pos "mid"	35.8571	67.1283	76.2527	0
chr7	99409956	99410149	-	repeat_id "MIR3,chr7,99409956,99410149";repeat_class "SINE";repeat_family "MIR";	chr7	99409993	99410169	exon	assembly	+	gene_id "ENSG00000106245.10"; ID "331465"; transcript_id "transcript70539.chr7.nnic"; exon "2"; exon_id "chr7.19542"; pos "mid"	197.727	330.556	114.932	65.0734
chr7	99409956	99410149	-	repeat_id "MIR3,chr7,99409956,99410149";repeat_class "SINE";repeat_family "MIR";	chr7	99410034	99410169	exon	assembly	+	gene_id "ENSG00000106245.10"; ID "331458"; transcript_id "ENST00000403633.6"; exon "2"; exon_id "chr7.19536"; pos "mid"	197.727	330.556	114.932	65.0734
chr7	99409956	99410149	-	repeat_id "MIR3,chr7,99409956,99410149";repeat_class "SINE";repeat_family "MIR";	chr7	99410034	99410169	exon	assembly	+	gene_id "ENSG00000106245.10"; ID "331472"; transcript_id "ENST00000222969.9"; exon "2"; exon_id "chr7.19536"; pos "mid"	197.727	330.556	114.932	65.0734
chr7	99482133	99482340	-	repeat_id "L1ME4a,chr7,99482133,99482340";repeat_class "LINE";repeat_family "L1";	chr7	99482163	99482322	exon	assembly	+	gene_id "ENSG00000198556.13"; ID "331631"; transcript_id "ENST00000379724.3"; exon "4"; exon_id "chr7.19685"; pos "last"	0	10.6795	0	0
chr7	99483657	99483928	-	repeat_id "L1ME4c,chr7,99483657,99483928";repeat_class "LINE";repeat_family "L1";	chr7	99483739	99483902	exon	assembly	+	gene_id "ENSG00000198556.13"; ID "331611"; transcript_id "transcript71759.chr7.nic"; exon "4"; exon_id "chr7.19687"; pos "last"	0	17.7992	0	0
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99618525	99618651	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331903"; transcript_id "transcript72424.chr7.nnic"; exon "2"; exon_id "chr7.19866"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99618525	99618651	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331920"; transcript_id "ENST00000394152.6"; exon "2"; exon_id "chr7.19866"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99618525	99618651	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331929"; transcript_id "ENST00000394150.5"; exon "2"; exon_id "chr7.19866"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99619048	99619132	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331904"; transcript_id "transcript72424.chr7.nnic"; exon "3"; exon_id "chr7.19872"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99619048	99619132	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331921"; transcript_id "ENST00000394152.6"; exon "3"; exon_id "chr7.19872"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	99618531	99619155	+	repeat_id "L2c,chr7,99618531,99619155";repeat_class "LINE";repeat_family "L2";	chr7	99619048	99619132	exon	assembly	+	gene_id "ENSG00000197037.10"; ID "331930"; transcript_id "ENST00000394150.5"; exon "3"; exon_id "chr7.19872"; pos "mid"	67.1044	22.8846	49.7301	62.1157
chr7	100051278	100051594	-	repeat_id "AluY,chr7,100051278,100051594";repeat_class "SINE";repeat_family "Alu";	chr7	100051478	100051610	exon	assembly	+	gene_id "ENSG00000166529.14"; ID "332100"; transcript_id "transcript73766.chr7.nic"; exon "2"; exon_id "chr7.20083"; pos "mid"	0	0	0	0
chr7	100102099	100102390	+	repeat_id "AluSx1,chr7,100102099,100102390";repeat_class "SINE";repeat_family "Alu";	chr7	100102061	100102393	exon	assembly	+	gene_id "ENSG00000221838.9"; ID "332375"; transcript_id "ENST00000422582.5"; exon "1"; exon_id "chr7.20201"; pos "first"	0	16.7821	0	4.92982
chr7	100325612	100325998	-	repeat_id "MSTA,chr7,100325612,100325998";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	100325691	100325779	exon	assembly	-	gene_id "ENSG00000078319.9"; ID "332630"; transcript_id "transcript74960.chr7.nnic"; exon "6"; exon_id "chr7.20499"; pos "mid"	0	0	0	0
chr7	100349365	100349910	-	repeat_id "LTR49,chr7,100349365,100349910";repeat_class "LTR";repeat_family "ERV1";	chr7	100349799	100349887	exon	assembly	+	gene_id "ENSG00000272752.6"; ID "332684"; transcript_id "ENST00000310771.8"; exon "5"; exon_id "chr7.20519"; pos "mid"	260.734	72.2134	0	67.0456
chr7	100355126	100355232	-	repeat_id "L1MD,chr7,100355126,100355232";repeat_class "LINE";repeat_family "L1";	chr7	100355143	100355240	exon	assembly	+	gene_id "ENSG00000272752.6"; ID "332692"; transcript_id "ENST00000310771.8"; exon "13"; exon_id "chr7.20527"; pos "mid"	2.04899	52.3804	44.2046	0
chr7	100706466	100706735	-	repeat_id "AluJo,chr7,100706466,100706735";repeat_class "SINE";repeat_family "Alu";	chr7	100706498	100706600	exon	assembly	+	gene_id "ENSG00000172336.4"; ID "333174"; transcript_id "transcript76464.chr7.nnic"; exon "2"; exon_id "chr7.21176"; pos "mid"	0	0	0	0
chr7	101014274	101014480	-	repeat_id "MSTD,chr7,101014274,101014480";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	101014325	101014439	exon	assembly	-	gene_id "ENSG00000227053.1"; ID "333471"; transcript_id "ENST00000448513.1"; exon "3"; exon_id "chr7.21454"; pos "last"	0	0	0	0
chr7	101218299	101218575	-	repeat_id "AluJr,chr7,101218299,101218575";repeat_class "SINE";repeat_family "Alu";	chr7	101218319	101218485	exon	assembly	+	gene_id "ENSG00000106400.11"; ID "333590"; transcript_id "transcript78208.chr7.nic"; exon "2"; exon_id "chr7.21584"; pos "mid"	22.539	9.15383	7.73577	13.8035
chr7	101309222	101310226	-	repeat_id "LTR13,chr7,101309222,101310226";repeat_class "LTR";repeat_family "ERVK";	chr7	101309614	101309682	exon	assembly	+	gene_id "ENSG00000232445.1"; ID "333658"; transcript_id "transcript79140.chr7.nnic"; exon "2"; exon_id "chr7.21711"; pos "mid"	0	0	0	0
chr7	101309222	101310226	-	repeat_id "LTR13,chr7,101309222,101310226";repeat_class "LTR";repeat_family "ERVK";	chr7	101309614	101309752	exon	assembly	+	gene_id "ENSG00000232445.1"; ID "333662"; transcript_id "transcript79155.chr7.nnic"; exon "2"; exon_id "chr7.21713"; pos "mid"	0	0	0	0
chr7	102566918	102567301	-	repeat_id "MSTA,chr7,102566918,102567301";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	102566997	102567083	exon	assembly	-	gene_id "ENSG00000168255.19"; ID "334203"; transcript_id "ENST00000486319.5"; exon "3"; exon_id "chr7.21976"; pos "mid"	0	0	0	0
chr7	102566918	102567301	-	repeat_id "MSTA,chr7,102566918,102567301";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	102566997	102567083	exon	assembly	-	gene_id "ENSG00000168255.19"; ID "334213"; transcript_id "ENST00000379340.9"; exon "4"; exon_id "chr7.21976"; pos "mid"	0	0	0	0
chr7	103353831	103353969	-	repeat_id "Penelope1_Vert,chr7,103353831,103353969";repeat_class "LINE";repeat_family "Penelope";	chr7	103353921	103353958	exon	assembly	+	gene_id "ENSG00000161057.11"; ID "334669"; transcript_id "ENST00000435765.5"; exon "3"; exon_id "chr7.22596"; pos "mid"	73.7635	34.5814	0	4.9298
chr7	103353831	103353969	-	repeat_id "Penelope1_Vert,chr7,103353831,103353969";repeat_class "LINE";repeat_family "Penelope";	chr7	103353921	103353958	exon	assembly	+	gene_id "ENSG00000161057.11"; ID "334689"; transcript_id "ENST00000292644.4"; exon "2"; exon_id "chr7.22596"; pos "mid"	73.7635	34.5814	0	4.9298
chr7	116327810	116328061	-	repeat_id "MIRb,chr7,116327810,116328061";repeat_class "SINE";repeat_family "MIR";	chr7	116327832	116327936	exon	assembly	-	gene_id "ENSG00000243243.5"; ID "337312"; transcript_id "transcript90291.chr7.nic"; exon "1"; exon_id "chr7.24795"; pos "first"	0	17.7992	0	0
chr7	117133837	117134411	-	repeat_id "Plat_L3,chr7,117133837,117134411";repeat_class "LINE";repeat_family "CR1";	chr7	117134124	117134192	exon	assembly	+	gene_id "ENSG00000004866.20"; ID "337636"; transcript_id "ENST00000265437.9"; exon "7"; exon_id "chr7.25055"; pos "mid"	5.63475	0	0	0
chr7	117133837	117134411	-	repeat_id "Plat_L3,chr7,117133837,117134411";repeat_class "LINE";repeat_family "CR1";	chr7	117134124	117134192	exon	assembly	+	gene_id "ENSG00000004866.20"; ID "337653"; transcript_id "ENST00000323984.7"; exon "7"; exon_id "chr7.25055"; pos "mid"	5.63475	0	0	0
chr7	128488302	128488727	+	repeat_id "Tigger1,chr7,128488302,128488727";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr7	128488323	128488597	exon	assembly	+	gene_id "ENSG00000165055.15"; ID "339042"; transcript_id "transcript96038.chr7.nic"; exon "6"; exon_id "chr7.26495"; pos "last"	18.441	52.8889	0	0
chr7	128502618	128502919	+	repeat_id "AluSx1,chr7,128502618,128502919";repeat_class "SINE";repeat_family "Alu";	chr7	128502614	128502919	exon	assembly	+	gene_id "ENSG00000165055.15"; ID "339026"; transcript_id "transcript95657.chr7.nic"; exon "10"; exon_id "chr7.26491"; pos "last"	0	0	0	0
chr7	130914891	130915076	-	repeat_id "AluJb,chr7,130914891,130915076";repeat_class "SINE";repeat_family "Alu";	chr7	130914962	130915102	exon	assembly	+	gene_id "ENSG00000233559.1"; ID "340691"; transcript_id "transcript100847.chr7.nnic"; exon "2"; exon_id "chr7.27735"; pos "mid"	11.7817	0	0	0
chr7	130914891	130915076	-	repeat_id "AluJb,chr7,130914891,130915076";repeat_class "SINE";repeat_family "Alu";	chr7	130914962	130915102	exon	assembly	+	gene_id "ENSG00000233559.1"; ID "340706"; transcript_id "transcript100867.chr7.nnic"; exon "2"; exon_id "chr7.27735"; pos "mid"	11.7817	0	0	0
chr7	134432178	134432666	-	repeat_id "MER1A,chr7,134432178,134432666";repeat_class "DNA";repeat_family "hAT-Charlie";	chr7	134432314	134432453	exon	assembly	-	gene_id "ENSG00000273297.1"; ID "341648"; transcript_id "ENST00000609619.1"; exon "1"; exon_id "chr7.28309"; pos "first"	0	0	0	0
chr7	134532966	134533089	-	repeat_id "X9_LINE,chr7,134532966,134533089";repeat_class "LINE";repeat_family "L1";	chr7	134533004	134533081	exon	assembly	+	gene_id "ENSG00000198074.9"; ID "341704"; transcript_id "transcript103892.chr7.nnic"; exon "4"; exon_id "chr7.28356"; pos "mid"	0	0	0	0
chr7	134532966	134533089	-	repeat_id "X9_LINE,chr7,134532966,134533089";repeat_class "LINE";repeat_family "L1";	chr7	134533004	134533081	exon	assembly	+	gene_id "ENSG00000198074.9"; ID "341725"; transcript_id "ENST00000359579.4"; exon "4"; exon_id "chr7.28356"; pos "mid"	0	0	0	0
chr7	139344692	139345012	-	repeat_id "AluY,chr7,139344692,139345012";repeat_class "SINE";repeat_family "Alu";	chr7	139344897	139345040	exon	assembly	+	gene_id "ENSG00000164898.12"; ID "343235"; transcript_id "transcript107485.chr7.nnic"; exon "2"; exon_id "chr7.29479"; pos "mid"	0	0	0	0
chr7	142860592	142861301	-	repeat_id "hAT-1_Mam,chr7,142860592,142861301";repeat_class "DNA";repeat_family "hAT-Tag1";	chr7	142861052	142861186	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344572"; transcript_id "transcript110583.chr7.nnic"; exon "2"; exon_id "chr7.30734"; pos "mid"	0	95.6067	0	103.526
chr7	142860592	142861301	-	repeat_id "hAT-1_Mam,chr7,142860592,142861301";repeat_class "DNA";repeat_family "hAT-Tag1";	chr7	142861052	142861186	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344576"; transcript_id "ENST00000619012.4"; exon "2"; exon_id "chr7.30734"; pos "mid"	0	95.6067	0	103.526
chr7	142860592	142861301	-	repeat_id "hAT-1_Mam,chr7,142860592,142861301";repeat_class "DNA";repeat_family "hAT-Tag1";	chr7	142861052	142861186	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344597"; transcript_id "ENST00000497095.5"; exon "2"; exon_id "chr7.30734"; pos "mid"	0	95.6067	0	103.526
chr7	142860592	142861301	-	repeat_id "hAT-1_Mam,chr7,142860592,142861301";repeat_class "DNA";repeat_family "hAT-Tag1";	chr7	142861052	142861186	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344602"; transcript_id "ENST00000614832.4"; exon "2"; exon_id "chr7.30734"; pos "mid"	0	95.6067	0	103.526
chr7	142861937	142862309	-	repeat_id "MLT1A0,chr7,142861937,142862309";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	142862000	142862133	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344598"; transcript_id "ENST00000497095.5"; exon "3"; exon_id "chr7.30750"; pos "mid"	0	87.47	0	119.302
chr7	142861937	142862309	-	repeat_id "MLT1A0,chr7,142861937,142862309";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	142862017	142862133	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344577"; transcript_id "ENST00000619012.4"; exon "3"; exon_id "chr7.30737"; pos "mid"	0	87.47	0	119.302
chr7	142861937	142862309	-	repeat_id "MLT1A0,chr7,142861937,142862309";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr7	142862017	142862133	exon	assembly	+	gene_id "ENSG00000106123.11"; ID "344603"; transcript_id "ENST00000614832.4"; exon "3"; exon_id "chr7.30737"; pos "mid"	0	87.47	0	119.302
chr7	143414302	143414602	-	repeat_id "AluSx1,chr7,143414302,143414602";repeat_class "SINE";repeat_family "Alu";	chr7	143414324	143414445	exon	assembly	+	gene_id "ENSG00000229153.5"; ID "344923"; transcript_id "transcript111079.chr7.nnic"; exon "2"; exon_id "chr7.31111"; pos "mid"	19.4653	10.6795	0	0
chr7	148963315	148963407	+	repeat_id "HY4,chr7,148963315,148963407";repeat_class "scRNA";repeat_family "scRNA";	chr7	148963315	148963410	exon	assembly	+	gene_id "ENSG00000252316.1"; ID "345573"; transcript_id "ENST00000516507.1"; exon "1"; exon_id "chr7.31736";	286.858	387.512	180.134	103.526
chr7	149128813	149129099	-	repeat_id "AluSg,chr7,149128813,149129099";repeat_class "SINE";repeat_family "Alu";	chr7	149128823	149128944	exon	assembly	+	gene_id "ENSG00000197024.8"; ID "345732"; transcript_id "ENST00000426851.6"; exon "2"; exon_id "chr7.31802"; pos "mid"	0	0	0	0
chr7	151361081	151361538	-	repeat_id "L1MC5a,chr7,151361081,151361538";repeat_class "LINE";repeat_family "L1";	chr7	151361059	151361249	exon	assembly	+	gene_id "ENSG00000013374.15"; ID "346889"; transcript_id "ENST00000468404.5"; exon "9"; exon_id "chr7.33166"; pos "last"	0	0	0	0
chr8	230646	230923	+	repeat_id "AluSq2,chr8,230646,230923";repeat_class "SINE";repeat_family "Alu";	chr8	230804	230907	exon	assembly	-	gene_id "ENSG00000223508.5"; ID "348895"; transcript_id "ENST00000606507.1"; exon "2"; exon_id "chr8.2"; pos "mid"	0	0	0	0
chr8	707506	708681	+	repeat_id "L1MB7,chr8,707506,708681";repeat_class "LINE";repeat_family "L1";	chr8	707786	708116	exon	assembly	-	gene_id "ENSG00000104714.13"; ID "349045"; transcript_id "transcript550.chr8.nnic"; exon "3"; exon_id "chr8.162"; pos "last"	0	0	0	33.5226
chr8	2705140	2705365	+	repeat_id "MIRc,chr8,2705140,2705365";repeat_class "SINE";repeat_family "MIR";	chr8	2705215	2705286	exon	assembly	-	gene_id "ENSG00000254319.5"; ID "349272"; transcript_id "ENST00000520842.5"; exon "2"; exon_id "chr8.493"; pos "mid"	0	0	0	0
chr8	2728202	2728557	+	repeat_id "LTR12C,chr8,2728202,2728557";repeat_class "LTR";repeat_family "ERV1";	chr8	2728330	2728417	exon	assembly	-	gene_id "ENSG00000254319.5"; ID "349271"; transcript_id "ENST00000520842.5"; exon "1"; exon_id "chr8.498"; pos "first"	0	0	0	0
chr8	11794623	11795989	+	repeat_id "LTR12C,chr8,11794623,11795989";repeat_class "LTR";repeat_family "ERV1";	chr8	11795573	11796011	exon	assembly	+	gene_id "ENSG00000079459.12"; ID "350596"; transcript_id "ENST00000618539.4"; exon "1"; exon_id "chr8.1935"; pos "first"	0	0	0	0
chr8	15757771	15757946	+	repeat_id "MIRc,chr8,15757771,15757946";repeat_class "SINE";repeat_family "MIR";	chr8	15757791	15757855	exon	assembly	+	gene_id "ENSG00000104723.20"; ID "351339"; transcript_id "transcript5628.chr8.nic"; exon "10"; exon_id "chr8.2585"; pos "mid"	55.3226	22.3762	82.8836	184.375
chr8	15757771	15757946	+	repeat_id "MIRc,chr8,15757771,15757946";repeat_class "SINE";repeat_family "MIR";	chr8	15757791	15757855	exon	assembly	+	gene_id "ENSG00000104723.20"; ID "351402"; transcript_id "ENST00000503731.5"; exon "10"; exon_id "chr8.2585"; pos "mid"	55.3226	22.3762	82.8836	184.375
chr8	22390706	22390866	-	repeat_id "FRAM,chr8,22390706,22390866";repeat_class "SINE";repeat_family "Alu";	chr8	22390730	22390847	exon	assembly	+	gene_id "ENSG00000104635.13"; ID "353186"; transcript_id "transcript9376.chr8.nnic"; exon "2"; exon_id "chr8.4325"; pos "mid"	0	0	0	0
chr8	22477623	22477816	-	repeat_id "AluJo,chr8,22477623,22477816";repeat_class "SINE";repeat_family "Alu";	chr8	22477647	22477837	exon	assembly	+	gene_id "ENSG00000120910.14"; ID "353305"; transcript_id "transcript9652.chr8.nnic"; exon "4"; exon_id "chr8.4392"; pos "last"	0	0	0	0
chr8	23227910	23228227	+	repeat_id "MSTD,chr8,23227910,23228227";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	23228066	23228153	exon	assembly	+	gene_id "ENSG00000246582.2"; ID "353976"; transcript_id "ENST00000500853.1"; exon "2"; exon_id "chr8.4878"; pos "mid"	19.4655	0	0	0
chr8	23543066	23543364	-	repeat_id "AluJr,chr8,23543066,23543364";repeat_class "SINE";repeat_family "Alu";	chr8	23543088	23543211	exon	assembly	+	gene_id "ENSG00000147454.13"; ID "354227"; transcript_id "transcript11702.chr8.nnic"; exon "2"; exon_id "chr8.5088"; pos "mid"	0	0	0	0
chr8	27312216	27312594	+	repeat_id "LTR40b,chr8,27312216,27312594";repeat_class "LTR";repeat_family "ERVL";	chr8	27312304	27312387	exon	assembly	+	gene_id "ENSG00000120899.17"; ID "355202"; transcript_id "ENST00000397501.5"; exon "2"; exon_id "chr8.5857"; pos "mid"	0	0	0	0
chr8	27312990	27313373	+	repeat_id "THE1D,chr8,27312990,27313373";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	27313205	27313287	exon	assembly	+	gene_id "ENSG00000120899.17"; ID "355203"; transcript_id "ENST00000397501.5"; exon "3"; exon_id "chr8.5858"; pos "mid"	0	0	0	0
chr8	27322322	27322488	+	repeat_id "MIRb,chr8,27322322,27322488";repeat_class "SINE";repeat_family "MIR";	chr8	27322402	27322499	exon	assembly	+	gene_id "ENSG00000120899.17"; ID "355204"; transcript_id "ENST00000397501.5"; exon "4"; exon_id "chr8.5859"; pos "mid"	0	0	0	0
chr8	29667694	29668191	-	repeat_id "Charlie1b,chr8,29667694,29668191";repeat_class "DNA";repeat_family "hAT-Charlie";	chr8	29667808	29668054	exon	assembly	-	gene_id "novel_gene_chr8_16323"; ID "356490"; transcript_id "transcript16322.chr8.nnic"; exon "3"; exon_id "chr8.6789"; pos "last"	36.3697	0	41.9942	0
chr8	29667694	29668191	-	repeat_id "Charlie1b,chr8,29667694,29668191";repeat_class "DNA";repeat_family "hAT-Charlie";	chr8	29667865	29668054	exon	assembly	-	gene_id "novel_gene_chr8_16325"; ID "356495"; transcript_id "transcript16324.chr8.nnic"; exon "3"; exon_id "chr8.6792"; pos "last"	36.3697	0	41.9942	0
chr8	32995181	32996452	-	repeat_id "L1MA2,chr8,32995181,32996452";repeat_class "LINE";repeat_family "L1";	chr8	32996178	32996316	exon	assembly	+	gene_id "ENSG00000247134.6"; ID "357437"; transcript_id "ENST00000520819.5"; exon "1"; exon_id "chr8.7436"; pos "first"	17.9288	0	0	0
chr8	33041206	33042594	-	repeat_id "L1MC3,chr8,33041206,33042594";repeat_class "LINE";repeat_family "L1";	chr8	33041635	33041771	exon	assembly	+	gene_id "ENSG00000247134.6"; ID "357438"; transcript_id "ENST00000520819.5"; exon "2"; exon_id "chr8.7437"; pos "mid"	0	0	0	0
chr8	33513474	33513581	+	repeat_id "U13,chr8,33513474,33513581";repeat_class "snRNA";repeat_family "snRNA";	chr8	33513475	33513578	exon	assembly	+	gene_id "ENSG00000239039.1"; ID "357588"; transcript_id "ENST00000459299.1"; exon "1"; exon_id "chr8.7503";	1211.46	1365.45	116.037	176.488
chr8	41530990	41531296	+	repeat_id "AluSp,chr8,41530990,41531296";repeat_class "SINE";repeat_family "Alu";	chr8	41531127	41531308	exon	assembly	+	gene_id "ENSG00000147536.11"; ID "358851"; transcript_id "transcript23839.chr8.nnic"; exon "3"; exon_id "chr8.8985"; pos "last"	0	0	0	0
chr8	42154310	42154590	-	repeat_id "L2d2,chr8,42154310,42154590";repeat_class "LINE";repeat_family "L2";	chr8	42154478	42154536	exon	assembly	+	gene_id "ENSG00000070718.11"; ID "359137"; transcript_id "ENST00000518421.5"; exon "2"; exon_id "chr8.9231"; pos "mid"	4.098	2.54275	24.3124	0
chr8	42154310	42154590	-	repeat_id "L2d2,chr8,42154310,42154590";repeat_class "LINE";repeat_family "L2";	chr8	42154478	42154536	exon	assembly	+	gene_id "ENSG00000070718.11"; ID "359160"; transcript_id "transcript24521.chr8.nic"; exon "2"; exon_id "chr8.9231"; pos "mid"	4.098	2.54275	24.3124	0
chr8	47969226	47969547	-	repeat_id "AluSp,chr8,47969226,47969547";repeat_class "SINE";repeat_family "Alu";	chr8	47969279	47969401	exon	assembly	+	gene_id "ENSG00000104738.16"; ID "360637"; transcript_id "transcript27923.chr8.nnic"; exon "11"; exon_id "chr8.10228"; pos "mid"	0	0	0	0
chr8	53913412	53913861	+	repeat_id "MLT1C2,chr8,53913412,53913861";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	53913497	53913922	exon	assembly	+	gene_id "ENSG00000147509.13"; ID "361393"; transcript_id "ENST00000523064.1"; exon "2"; exon_id "chr8.10896"; pos "last"	0	17.2907	116.037	39.4384
chr8	53944746	53945626	+	repeat_id "L1MB7,chr8,53944746,53945626";repeat_class "LINE";repeat_family "L1";	chr8	53945325	53945370	exon	assembly	+	gene_id "ENSG00000147509.13"; ID "361395"; transcript_id "ENST00000517405.1"; exon "1"; exon_id "chr8.10897"; pos "first"	0	0	0	0
chr8	61661700	61662482	+	repeat_id "Tigger18a,chr8,61661700,61662482";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr8	61661673	61661926	exon	assembly	-	gene_id "ENSG00000198363.17"; ID "362497"; transcript_id "transcript34913.chr8.nnic"; exon "4"; exon_id "chr8.11978"; pos "last"	0	18.3078	0	0
chr8	67047672	67047862	-	repeat_id "Tigger15a,chr8,67047672,67047862";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr8	67047685	67047859	exon	assembly	-	gene_id "ENSG00000121022.13"; ID "363475"; transcript_id "ENST00000523086.5"; exon "3"; exon_id "chr8.12831"; pos "mid"	36.882	0	0	0
chr8	71965207	71965616	+	repeat_id "MSTA,chr8,71965207,71965616";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	71965409	71965534	exon	assembly	+	gene_id "ENSG00000235531.9"; ID "364213"; transcript_id "transcript39133.chr8.nic"; exon "3"; exon_id "chr8.13590"; pos "mid"	0	15.2564	0	72.961
chr8	73062674	73063114	+	repeat_id "MLT1A0,chr8,73062674,73063114";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	73062939	73063061	exon	assembly	+	gene_id "ENSG00000253636.1"; ID "364373"; transcript_id "ENST00000517664.1"; exon "2"; exon_id "chr8.13755"; pos "last"	0	0	0	0
chr8	73776276	73776545	-	repeat_id "MLT1B,chr8,73776276,73776545";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	73776322	73776527	exon	assembly	-	gene_id "ENSG00000258677.2"; ID "364552"; transcript_id "transcript39609.chr8.nnic"; exon "6"; exon_id "chr8.13872"; pos "last"	0	0	0	0
chr8	76988298	76988912	-	repeat_id "Tigger1,chr8,76988298,76988912";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr8	76988307	76988338	exon	assembly	-	gene_id "ENSG00000164751.14"; ID "364936"; transcript_id "ENST00000357039.8"; exon "2"; exon_id "chr8.14279"; pos "mid"	3.58575	27.9702	0	0
chr8	78699459	78702888	-	repeat_id "L1PA13,chr8,78699459,78702888";repeat_class "LINE";repeat_family "L1";	chr8	78701958	78702116	exon	assembly	+	gene_id "ENSG00000104427.11"; ID "365010"; transcript_id "transcript41125.chr8.nnic"; exon "8"; exon_id "chr8.14350"; pos "mid"	0	0	0	0
chr8	78704410	78706708	-	repeat_id "L1PA13,chr8,78704410,78706708";repeat_class "LINE";repeat_family "L1";	chr8	78705108	78706889	exon	assembly	+	gene_id "ENSG00000104427.11"; ID "365011"; transcript_id "transcript41125.chr8.nnic"; exon "9"; exon_id "chr8.14351"; pos "last"	0	54.923	0	0
chr8	86368634	86369052	+	repeat_id "L2c,chr8,86368634,86369052";repeat_class "LINE";repeat_family "L2";	chr8	86368939	86369031	exon	assembly	+	gene_id "ENSG00000123124.13"; ID "365788"; transcript_id "ENST00000517970.5"; exon "2"; exon_id "chr8.15275"; pos "mid"	35.3451	16.2736	0	65.0737
chr8	86515377	86515543	-	repeat_id "MIRb,chr8,86515377,86515543";repeat_class "SINE";repeat_family "MIR";	chr8	86515462	86515499	exon	assembly	+	gene_id "ENSG00000085719.12"; ID "365983"; transcript_id "ENST00000517490.5"; exon "2"; exon_id "chr8.15346"; pos "mid"	67.1044	139.85	41.9942	15.7754
chr8	91082746	91083008	-	repeat_id "AluSz6,chr8,91082746,91083008";repeat_class "SINE";repeat_family "Alu";	chr8	91082777	91082945	exon	assembly	+	gene_id "ENSG00000155100.10"; ID "366510"; transcript_id "transcript45523.chr8.nnic"; exon "6"; exon_id "chr8.15940"; pos "mid"	0	0	0	0
chr8	93724336	93724591	-	repeat_id "AluJb,chr8,93724336,93724591";repeat_class "SINE";repeat_family "Alu";	chr8	93724510	93724595	exon	assembly	+	gene_id "ENSG00000188343.12"; ID "366810"; transcript_id "ENST00000518116.5"; exon "8"; exon_id "chr8.16319"; pos "mid"	0	0	0	0
chr8	96231484	96231666	+	repeat_id "MIR3,chr8,96231484,96231666";repeat_class "SINE";repeat_family "MIR";	chr8	96231532	96231621	exon	assembly	-	gene_id "ENSG00000156467.9"; ID "367799"; transcript_id "ENST00000517523.1"; exon "3"; exon_id "chr8.17093"; pos "mid"	0	10.6795	0	0
chr8	98996631	98997062	-	repeat_id "Charlie1b,chr8,98996631,98997062";repeat_class "DNA";repeat_family "hAT-Charlie";	chr8	98996763	98996966	exon	assembly	-	gene_id "ENSG00000253948.1"; ID "368431"; transcript_id "ENST00000521696.1"; exon "2"; exon_id "chr8.17586"; pos "last"	19.4655	18.3078	78.4631	0
chr8	100532184	100532474	+	repeat_id "AluJr,chr8,100532184,100532474";repeat_class "SINE";repeat_family "Alu";	chr8	100532356	100532460	exon	assembly	-	gene_id "ENSG00000186106.11"; ID "369277"; transcript_id "ENST00000519597.5"; exon "3"; exon_id "chr8.18139"; pos "mid"	0	0	0	0
chr8	101202159	101202485	+	repeat_id "AluSg7,chr8,101202159,101202485";repeat_class "SINE";repeat_family "Alu";	chr8	101202333	101202447	exon	assembly	-	gene_id "ENSG00000120963.11"; ID "369564"; transcript_id "ENST00000519882.5"; exon "2"; exon_id "chr8.18383"; pos "mid"	99.3757	78.3163	202.236	0
chr8	102261110	102261291	+	repeat_id "OldhAT1,chr8,102261110,102261291";repeat_class "DNA";repeat_family "hAT-Ac";	chr8	102261146	102261259	exon	assembly	-	gene_id "ENSG00000104517.12"; ID "369925"; transcript_id "transcript57640.chr8.nic"; exon "5"; exon_id "chr8.18683"; pos "mid"	35.3449	0	40.8891	37.4665
chr8	122784663	122784867	-	repeat_id "MIR,chr8,122784663,122784867";repeat_class "SINE";repeat_family "MIR";	chr8	122784786	122784805	exon	assembly	+	gene_id "ENSG00000178764.7"; ID "372933"; transcript_id "transcript68021.chr8.nnic"; exon "3"; exon_id "chr8.21124"; pos "mid"	18.441	0	0	0
chr8	124461996	124462304	-	repeat_id "AluSg4,chr8,124461996,124462304";repeat_class "SINE";repeat_family "Alu";	chr8	124462027	124462148	exon	assembly	+	gene_id "ENSG00000183665.5"; ID "373691"; transcript_id "transcript71229.chr8.nnic"; exon "2"; exon_id "chr8.21663"; pos "mid"	0	0	0	0
chr8	126592210	126592515	+	repeat_id "MLT1H,chr8,126592210,126592515";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	126592274	126592496	exon	assembly	+	gene_id "ENSG00000254286.5"; ID "374482"; transcript_id "transcript73616.chr8.nnic"; exon "3"; exon_id "chr8.22127"; pos "last"	0	0	0	0
chr8	129904250	129904641	+	repeat_id "LTR16E2,chr8,129904250,129904641";repeat_class "LTR";repeat_family "ERVL";	chr8	129904499	129904585	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375054"; transcript_id "transcript75639.chr8.nic"; exon "3"; exon_id "chr8.22658"; pos "mid"	37.3942	0	0	72.9614
chr8	129904250	129904641	+	repeat_id "LTR16E2,chr8,129904250,129904641";repeat_class "LTR";repeat_family "ERVL";	chr8	129904499	129904585	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375128"; transcript_id "ENST00000519110.5"; exon "3"; exon_id "chr8.22658"; pos "mid"	37.3942	0	0	72.9614
chr8	129970880	129971079	+	repeat_id "MIR,chr8,129970880,129971079";repeat_class "SINE";repeat_family "MIR";	chr8	129970943	129970995	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375053"; transcript_id "transcript75639.chr8.nic"; exon "2"; exon_id "chr8.22657"; pos "mid"	13.8308	0	0	0
chr8	129970880	129971079	+	repeat_id "MIR,chr8,129970880,129971079";repeat_class "SINE";repeat_family "MIR";	chr8	129970943	129970995	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375068"; transcript_id "transcript75681.chr8.nic"; exon "2"; exon_id "chr8.22657"; pos "mid"	13.8308	0	0	0
chr8	129970880	129971079	+	repeat_id "MIR,chr8,129970880,129971079";repeat_class "SINE";repeat_family "MIR";	chr8	129970943	129970995	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375113"; transcript_id "ENST00000517654.5"; exon "2"; exon_id "chr8.22657"; pos "mid"	13.8308	0	0	0
chr8	129970880	129971079	+	repeat_id "MIR,chr8,129970880,129971079";repeat_class "SINE";repeat_family "MIR";	chr8	129970943	129970995	exon	assembly	-	gene_id "ENSG00000153310.19"; ID "375127"; transcript_id "ENST00000519110.5"; exon "2"; exon_id "chr8.22657"; pos "mid"	13.8308	0	0	0
chr8	133499059	133499257	+	repeat_id "MIRb,chr8,133499059,133499257";repeat_class "SINE";repeat_family "MIR";	chr8	133499135	133499189	exon	assembly	-	gene_id "ENSG00000008513.14"; ID "376122"; transcript_id "ENST00000522652.5"; exon "3"; exon_id "chr8.23515"; pos "mid"	0	0	0	0
chr8	140517404	140517704	-	repeat_id "AluSz,chr8,140517404,140517704";repeat_class "SINE";repeat_family "Alu";	chr8	140517429	140517745	exon	assembly	+	gene_id "ENSG00000104472.9"; ID "376650"; transcript_id "transcript78460.chr8.nnic"; exon "4"; exon_id "chr8.24053"; pos "last"	0	0	0	0
chr8	140948670	140948882	+	repeat_id "MER2,chr8,140948670,140948882";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr8	140948666	140948723	exon	assembly	-	gene_id "ENSG00000169398.19"; ID "376829"; transcript_id "transcript78812.chr8.nic"; exon "2"; exon_id "chr8.24189"; pos "mid"	19.9778	15.765	34.2584	0
chr8	142679440	142680003	-	repeat_id "MER4B,chr8,142679440,142680003";repeat_class "LTR";repeat_family "ERV1";	chr8	142679437	142679856	exon	assembly	-	gene_id "ENSG00000234616.8"; ID "377435"; transcript_id "transcript80172.chr8.nnic"; exon "3"; exon_id "chr8.24702"; pos "last"	0	0	0	0
chr8	143020241	143020533	-	repeat_id "AluJr,chr8,143020241,143020533";repeat_class "SINE";repeat_family "Alu";	chr8	143020262	143020377	exon	assembly	+	gene_id "ENSG00000160932.10"; ID "377633"; transcript_id "ENST00000521699.5"; exon "2"; exon_id "chr8.24887"; pos "mid"	0	42.2092	0	9.85965
chr8	143556821	143557307	-	repeat_id "L1MB7,chr8,143556821,143557307";repeat_class "LINE";repeat_family "L1";	chr8	143556821	143557324	exon	assembly	-	gene_id "novel_gene_chr8_82622"; ID "377941"; transcript_id "transcript82621.chr8.nnic"; exon "2"; exon_id "chr8.25213"; pos "last"	0	0	0	0
chr8	143590623	143590914	+	repeat_id "AluY,chr8,143590623,143590914";repeat_class "SINE";repeat_family "Alu";	chr8	143590608	143590738	exon	assembly	-	gene_id "ENSG00000104529.17"; ID "378116"; transcript_id "ENST00000442189.6"; exon "2"; exon_id "chr8.25274"; pos "mid"	6.65925	0	0	0
chr8	144160812	144161348	-	repeat_id "MLT1E2,chr8,144160812,144161348";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr8	144160970	144161089	exon	assembly	+	gene_id "ENSG00000179832.17"; ID "378857"; transcript_id "transcript84697.chr8.nic"; exon "2"; exon_id "chr8.26195"; pos "mid"	0	30.5129	0	32.5367
chr8	144212891	144213424	-	repeat_id "HAL1M8,chr8,144212891,144213424";repeat_class "LINE";repeat_family "L1";	chr8	144212994	144213467	exon	assembly	+	gene_id "ENSG00000179832.17"; ID "378868"; transcript_id "transcript84697.chr8.nic"; exon "13"; exon_id "chr8.26196"; pos "last"	0	0	0	0
chr8	144212891	144213424	-	repeat_id "HAL1M8,chr8,144212891,144213424";repeat_class "LINE";repeat_family "L1";	chr8	144212994	144213467	exon	assembly	+	gene_id "ENSG00000179832.17"; ID "378921"; transcript_id "ENST00000423230.6"; exon "12"; exon_id "chr8.26196"; pos "last"	0	0	0	0
chr8	144427021	144427326	+	repeat_id "AluSx,chr8,144427021,144427326";repeat_class "SINE";repeat_family "Alu";	chr8	144427172	144427271	exon	assembly	-	gene_id "ENSG00000160948.13"; ID "379339"; transcript_id "transcript86107.chr8.nnic"; exon "2"; exon_id "chr8.26691"; pos "mid"	7.17143	49.8375	7.73577	57.1857
chr8	145055126	145056118	+	repeat_id "LTR13,chr8,145055126,145056118";repeat_class "LTR";repeat_family "ERVK";	chr8	145055330	145056030	exon	assembly	+	gene_id "ENSG00000182307.12"; ID "380134"; transcript_id "transcript88759.chr8.nnic"; exon "6"; exon_id "chr8.27361"; pos "last"	0	0	49.73	33.5226
chr9	522998	524024	+	repeat_id "L2a,chr9,522998,524024";repeat_class "LINE";repeat_family "L2";	chr9	523893	524006	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380320"; transcript_id "transcript265.chr9.nnic"; exon "2"; exon_id "chr9.276"; pos "mid"	0	0	0	0
chr9	539494	539786	-	repeat_id "AluJr,chr9,539494,539786";repeat_class "SINE";repeat_family "Alu";	chr9	539516	539633	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380321"; transcript_id "transcript265.chr9.nnic"; exon "3"; exon_id "chr9.277"; pos "mid"	19.9778	0	0	0
chr9	539494	539786	-	repeat_id "AluJr,chr9,539494,539786";repeat_class "SINE";repeat_family "Alu";	chr9	539516	539633	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380326"; transcript_id "transcript288.chr9.nnic"; exon "2"; exon_id "chr9.277"; pos "mid"	19.9778	0	0	0
chr9	539494	539786	-	repeat_id "AluJr,chr9,539494,539786";repeat_class "SINE";repeat_family "Alu";	chr9	539516	539633	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380331"; transcript_id "transcript289.chr9.nnic"; exon "2"; exon_id "chr9.277"; pos "mid"	19.9778	0	0	0
chr9	539787	541116	-	repeat_id "L1M2,chr9,539787,541116";repeat_class "LINE";repeat_family "L1";	chr9	540508	540667	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380322"; transcript_id "transcript265.chr9.nnic"; exon "4"; exon_id "chr9.278"; pos "mid"	0	0	0	0
chr9	539787	541116	-	repeat_id "L1M2,chr9,539787,541116";repeat_class "LINE";repeat_family "L1";	chr9	540508	540667	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380327"; transcript_id "transcript288.chr9.nnic"; exon "3"; exon_id "chr9.278"; pos "mid"	0	0	0	0
chr9	539787	541116	-	repeat_id "L1M2,chr9,539787,541116";repeat_class "LINE";repeat_family "L1";	chr9	540508	540667	exon	assembly	+	gene_id "ENSG00000107104.18"; ID "380332"; transcript_id "transcript289.chr9.nnic"; exon "3"; exon_id "chr9.278"; pos "mid"	0	0	0	0
chr9	4654276	4655017	-	repeat_id "LTR1A2,chr9,4654276,4655017";repeat_class "LTR";repeat_family "ERV1";	chr9	4654594	4654804	exon	assembly	-	gene_id "ENSG00000106686.16"; ID "381094"; transcript_id "transcript1606.chr9.nnic"; exon "5"; exon_id "chr9.927"; pos "last"	20.49	0	0	0
chr9	4654276	4655017	-	repeat_id "LTR1A2,chr9,4654276,4655017";repeat_class "LTR";repeat_family "ERV1";	chr9	4654594	4654804	exon	assembly	-	gene_id "ENSG00000106686.16"; ID "381104"; transcript_id "transcript1617.chr9.nnic"; exon "4"; exon_id "chr9.927"; pos "last"	20.49	0	0	0
chr9	4676553	4676818	+	repeat_id "MLT1L,chr9,4676553,4676818";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr9	4676600	4676749	exon	assembly	-	gene_id "ENSG00000273061.1"; ID "381118"; transcript_id "ENST00000609131.1"; exon "2"; exon_id "chr9.935"; pos "last"	0	0	0	0
chr9	5603475	5605190	+	repeat_id "L1MEd,chr9,5603475,5605190";repeat_class "LINE";repeat_family "L1";	chr9	5604881	5604935	exon	assembly	-	gene_id "novel_gene_chr9_2910"; ID "381504"; transcript_id "transcript2909.chr9.nnic"; exon "2"; exon_id "chr9.1173"; pos "mid"	0	0	0	0
chr9	14180595	14180838	+	repeat_id "L2d,chr9,14180595,14180838";repeat_class "LINE";repeat_family "L2";	chr9	14180659	14180802	exon	assembly	-	gene_id "ENSG00000147862.15"; ID "382770"; transcript_id "ENST00000543693.5"; exon "1"; exon_id "chr9.2063"; pos "first"	0	0	0	0
chr9	21324012	21324508	-	repeat_id "MLT1F1,chr9,21324012,21324508";repeat_class "LTR";repeat_family "ERVL-MaLR";	chr9	21324052	21324321	exon	assembly	-	gene_id "ENSG00000198642.6"; ID "384648"; transcript_id "transcript8143.chr9.nnic"; exon "4"; exon_id "chr9.3215"; pos "last"	93.741	0	0	0
chr9	21330747	21330939	+	repeat_id "AluSx,chr9,21330747,21330939";repeat_class "SINE";repeat_family "Alu";	chr9	21330794	21330913	exon	assembly	-	gene_id "ENSG00000198642.6"; ID "384646"; transcript_id "transcript8143.chr9.nnic"; exon "2"; exon_id "chr9.3213"; pos "mid"	0	0	0	0
chr9	32997222	32997347	+	repeat_id "FLAM_A,chr9,32997222,32997347";repeat_class "SINE";repeat_family "Alu";	chr9	32997243	32997360	exon	assembly	-	gene_id "ENSG00000137074.18"; ID "385860"; transcript_id "ENST00000479656.5"; exon "1"; exon_id "chr9.4095"; pos "first"	11.7817	0	0	0
chr9	33177417	33177637	+	repeat_id "MER58A,chr9,33177417,33177637";repeat_class "DNA";repeat_family "hAT-Charlie";	chr9	33177420	33177469	exon	assembly	+	gene_id "ENSG00000233554.5"; ID "386028"; transcript_id "ENST00000442432.1"; exon "2"; exon_id "chr9.4190"; pos "mid"	0	0	0	0
chr9	36056974	36057147	+	repeat_id "Tigger12c,chr9,36056974,36057147";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr9	36056980	36057013	exon	assembly	+	gene_id "ENSG00000122707.11"; ID "388341"; transcript_id "ENST00000475774.5"; exon "3"; exon_id "chr9.6104"; pos "mid"	0	0	0	39.4384
chr9	36085772	36086174	+	repeat_id "Tigger22N1,chr9,36085772,36086174";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr9	36085902	36086181	exon	assembly	+	gene_id "ENSG00000122707.11"; ID "388349"; transcript_id "ENST00000475774.5"; exon "11"; exon_id "chr9.6106"; pos "last"	0	0	0	0
chr9	37084153	37084295	-	repeat_id "FRAM,chr9,37084153,37084295";repeat_class "SINE";repeat_family "Alu";	chr9	37084199	37084292	exon	assembly	+	gene_id "ENSG00000281649.1"; ID "388992"; transcript_id "transcript22337.chr9.nnic"; exon "2"; exon_id "chr9.6368"; pos "mid"	0	0	17.6818	0
chr9	37881374	37881653	+	repeat_id "AluJb,chr9,37881374,37881653";repeat_class "SINE";repeat_family "Alu";	chr9	37881518	37881631	exon	assembly	-	gene_id "ENSG00000122696.13"; ID "389382"; transcript_id "ENST00000496760.5"; exon "3"; exon_id "chr9.6643"; pos "mid"	0	0	0	0
chr9	37899652	37899949	-	repeat_id "L1M5,chr9,37899652,37899949";repeat_class "LINE";repeat_family "L1";	chr9	37899829	37899950	exon	assembly	-	gene_id "ENSG00000122696.13"; ID "389381"; transcript_id "ENST00000496760.5"; exon "2"; exon_id "chr9.6560"; pos "mid"	14.3429	0	0	0
chr9	37899652	37899949	-	repeat_id "L1M5,chr9,37899652,37899949";repeat_class "LINE";repeat_family "L1";	chr9	37899829	37899950	exon	assembly	-	gene_id "ENSG00000122696.13"; ID "389390"; transcript_id "ENST00000377716.6"; exon "2"; exon_id "chr9.6560"; pos "mid"	14.3429	0	0	0
chr9	37899652	37899949	-	repeat_id "L1M5,chr9,37899652,37899949";repeat_class "LINE";repeat_family "L1";	chr9	37899844	37899950	exon	assembly	-	gene_id "ENSG00000122696.13"; ID "389386"; transcript_id "transcript23864.chr9.nnic"; exon "2"; exon_id "chr9.6646"; pos "mid"	14.3429	0	0	0
chr9	38540551	38540896	-	repeat_id "LTR46,chr9,38540551,38540896";repeat_class "LTR";repeat_family "ERV1";	chr9	38540569	38540849	exon	assembly	-	gene_id "ENSG00000283486.2"; ID "389495"; transcript_id "ENST00000625242.1"; exon "3"; exon_id "chr9.6742"; pos "last"	0	0	0	0
chr9	41007187	41007588	+	repeat_id "L1HS,chr9,41007187,41007588";repeat_class "LINE";repeat_family "L1";	chr9	41007440	41007609	exon	assembly	+	gene_id "ENSG00000276291.5"; ID "389653"; transcript_id "transcript25023.chr9.nnic"; exon "4"; exon_id "chr9.7115"; pos "mid"	0	0	0	0
chr9	41007187	41007588	+	repeat_id "L1HS,chr9,41007187,41007588";repeat_class "LINE";repeat_family "L1";	chr9	41007440	41007609	exon	assembly	+	gene_id "ENSG00000276291.5"; ID "389669"; transcript_id "transcript25084.chr9.nnic"; exon "4"; exon_id "chr9.7115"; pos "mid"	0	0	0	0
chr9	41013769	41014105	+	repeat_id "L1ME3A,chr9,41013769,41014105";repeat_class "LINE";repeat_family "L1";	chr9	41013781	41014136	exon	assembly	+	gene_id "ENSG00000276291.5"; ID "389656"; transcript_id "transcript25023.chr9.nnic"; exon "7"; exon_id "chr9.7118"; pos "last"	0	0	0	0
chr9	41013769	41014105	+	repeat_id "L1ME3A,chr9,41013769,41014105";repeat_class "LINE";repeat_family "L1";	chr9	41013781	41014136	exon	assembly	+	gene_id "ENSG00000276291.5"; ID "389671"; transcript_id "transcript25084.chr9.nnic"; exon "6"; exon_id "chr9.7118"; pos "last"	0	0	0	0
chr9	41171768	41171952	+	repeat_id "Charlie16a,chr9,41171768,41171952";repeat_class "DNA";repeat_family "hAT-Charlie";	chr9	41171847	41171934	exon	assembly	-	gene_id "ENSG00000215126.10"; ID "389842"; transcript_id "transcript25528.chr9.nic"; exon "6"; exon_id "chr9.7197"; pos "mid"	0	0	0	0
chr9	41171768	41171952	+	repeat_id "Charlie16a,chr9,41171768,41171952";repeat_class "DNA";repeat_family "hAT-Charlie";	chr9	41171847	41171934	exon	assembly	-	gene_id "ENSG00000215126.10"; ID "389888"; transcript_id "transcript25555.chr9.nic"; exon "5"; exon_id "chr9.7197"; pos "mid"	0	0	0	0
chr9	41171768	41171952	+	repeat_id "Charlie16a,chr9,41171768,41171952";repeat_class "DNA";repeat_family "hAT-Charlie";	chr9	41171847	41171934	exon	assembly	-	gene_id "ENSG00000215126.10"; ID "389988"; transcript_id "ENST00000486387.6"; exon "7"; exon_id "chr9.7197"; pos "mid"	0	0	0	0
chr9	70346602	70346976	+	repeat_id "L2d,chr9,70346602,70346976";repeat_class "LINE";repeat_family "L2";	chr9	70346605	70346649	exon	assembly	+	gene_id "ENSG00000198887.8"; ID "391043"; transcript_id "ENST00000361138.6"; exon "19"; exon_id "chr9.8756"; pos "mid"	29.7104	37.6323	40.8891	0
chr9	72363440	72363603	+	repeat_id "MIR3,chr9,72363440,72363603";repeat_class "SINE";repeat_family "MIR";	chr9	72363470	72363606	exon	assembly	-	gene_id "ENSG00000107372.12"; ID "391503"; transcript_id "ENST00000376962.9"; exon "2"; exon_id "chr9.9061"; pos "mid"	265.344	100.184	203.341	69.0175
chr9	76395441	76395578	+	repeat_id "AluJb,chr9,76395441,76395578";repeat_class "SINE";repeat_family "Alu";	chr9	76395441	76395571	exon	assembly	+	gene_id "ENSG00000234618.1"; ID "391849"; transcript_id "transcript31298.chr9.nnic"; exon "2"; exon_id "chr9.9405"; pos "mid"	0	0	0	0
chr9	76395441	76395578	+	repeat_id "AluJb,chr9,76395441,76395578";repeat_class "SINE";repeat_family "Alu";	chr9	76395441	76395571	exon	assembly	+	gene_id "ENSG00000234618.1"; ID "391853"; transcript_id "transcript31299.chr9.nnic"; exon "2"; exon_id "chr9.9405"; pos "mid"	0	0	0	0
chr9	83919950	83920236	+	repeat_id "AluJb,chr9,83919950,83920236";repeat_class "SINE";repeat_family "Alu";	chr9	83920106	83920212	exon	assembly	-	gene_id "ENSG00000165115.14"; ID "393228"; transcript_id "transcript36487.chr9.nnic"; exon "3"; exon_id "chr9.10337"; pos "mid"	156.748	0	39.784	0
chr9	83919950	83920236	+	repeat_id "AluJb,chr9,83919950,83920236";repeat_class "SINE";repeat_family "Alu";	chr9	83920106	83920212	exon	assembly	-	gene_id "ENSG00000165115.14"; ID "393240"; transcript_id "transcript36665.chr9.nnic"; exon "2"; exon_id "chr9.10337"; pos "mid"	156.748	0	39.784	0
chr9	83988302	83988603	-	repeat_id "AluJo,chr9,83988302,83988603";repeat_class "SINE";repeat_family "Alu";	chr9	83988329	83988404	exon	assembly	+	gene_id "ENSG00000178966.16"; ID "393361"; transcript_id "transcript37141.chr9.nnic"; exon "2"; exon_id "chr9.10471"; pos "mid"	0	0	0	0
chr9	85585931	85586235	+	repeat_id "AluSq2,chr9,85585931,85586235";repeat_class "SINE";repeat_family "Alu";	chr9	85585924	85586245	exon	assembly	-	gene_id "ENSG00000135049.15"; ID "393520"; transcript_id "transcript37330.chr9.nnic"; exon "1"; exon_id "chr9.10585"; pos "first"	0	0	0	0
chr9	88415432	88415719	-	repeat_id "AluJr,chr9,88415432,88415719";repeat_class "SINE";repeat_family "Alu";	chr9	88415607	88415699	exon	assembly	+	gene_id "ENSG00000106723.16"; ID "394250"; transcript_id "ENST00000469017.6"; exon "2"; exon_id "chr9.11092"; pos "mid"	19.4655	0	0	31.5507
chr9	88416616	88416922	-	repeat_id "AluSp,chr9,88416616,88416922";repeat_class "SINE";repeat_family "Alu";	chr9	88416644	88416766	exon	assembly	+	gene_id "ENSG00000106723.16"; ID "394251"; transcript_id "ENST00000469017.6"; exon "3"; exon_id "chr9.11093"; pos "mid"	0	0	2.21022	0
chr9	88418785	88418941	+	repeat_id "MIR,chr9,88418785,88418941";repeat_class "SINE";repeat_family "MIR";	chr9	88418778	88418951	exon	assembly	+	gene_id "ENSG00000106723.16"; ID "394252"; transcript_id "ENST00000469017.6"; exon "4"; exon_id "chr9.11094"; pos "mid"	35.8575	69.1625	37.5737	35.4946
chr9	91294570	91294916	+	repeat_id "Tigger1,chr9,91294570,91294916";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr9	91294730	91294797	exon	assembly	-	gene_id "ENSG00000148090.11"; ID "394684"; transcript_id "transcript39917.chr9.nnic"; exon "7"; exon_id "chr9.11463"; pos "mid"	16.9043	18.3078	0	0
chr9	92240561	92240692	-	repeat_id "FLAM_C,chr9,92240561,92240692";repeat_class "SINE";repeat_family "Alu";	chr9	92240643	92240691	exon	assembly	-	gene_id "ENSG00000196305.17"; ID "395081"; transcript_id "ENST00000627121.2"; exon "31"; exon_id "chr9.11670"; pos "mid"	0	0	0	0
chr9	97237799	97238071	-	repeat_id "AluSg4,chr9,97237799,97238071";repeat_class "SINE";repeat_family "Alu";	chr9	97237764	97238085	exon	assembly	-	gene_id "ENSG00000203279.3"; ID "397370"; transcript_id "ENST00000366109.2"; exon "2"; exon_id "chr9.13277"; pos "last"	19.9778	0	0	0
chr9	101397179	101397311	+	repeat_id "FLAM_C,chr9,101397179,101397311";repeat_class "SINE";repeat_family "Alu";	chr9	101397199	101397295	exon	assembly	-	gene_id "ENSG00000136897.7"; ID "398474"; transcript_id "transcript49381.chr9.nnic"; exon "2"; exon_id "chr9.14283"; pos "mid"	0	0	0	0
chr9	101397179	101397311	+	repeat_id "FLAM_C,chr9,101397179,101397311";repeat_class "SINE";repeat_family "Alu";	chr9	101397243	101397295	exon	assembly	-	gene_id "ENSG00000136897.7"; ID "398478"; transcript_id "transcript49407.chr9.nnic"; exon "2"; exon_id "chr9.14285"; pos "mid"	0	0	0	0
chr9	105573641	105574325	+	repeat_id "L1M7,chr9,105573641,105574325";repeat_class "LINE";repeat_family "L1";	chr9	105573655	105573746	exon	assembly	+	gene_id "ENSG00000106692.13"; ID "399078"; transcript_id "ENST00000602661.5"; exon "2"; exon_id "chr9.14708"; pos "mid"	44.0531	0	0	0
chr9	111005292	111005576	+	repeat_id "AluJb,chr9,111005292,111005576";repeat_class "SINE";repeat_family "Alu";	chr9	111005465	111005539	exon	assembly	-	gene_id "ENSG00000198121.13"; ID "400176"; transcript_id "transcript54016.chr9.nnic"; exon "4"; exon_id "chr9.15480"; pos "mid"	0	0	0	0
chr9	111008544	111009368	+	repeat_id "L1MEd,chr9,111008544,111009368";repeat_class "LINE";repeat_family "L1";	chr9	111009148	111009201	exon	assembly	-	gene_id "ENSG00000198121.13"; ID "400161"; transcript_id "transcript53850.chr9.nnic"; exon "3"; exon_id "chr9.15472"; pos "mid"	0	0	0	0
chr9	111008544	111009368	+	repeat_id "L1MEd,chr9,111008544,111009368";repeat_class "LINE";repeat_family "L1";	chr9	111009148	111009201	exon	assembly	-	gene_id "ENSG00000198121.13"; ID "400175"; transcript_id "transcript54016.chr9.nnic"; exon "3"; exon_id "chr9.15472"; pos "mid"	0	0	0	0
chr9	111011256	111011741	-	repeat_id "L3,chr9,111011256,111011741";repeat_class "LINE";repeat_family "CR1";	chr9	111011548	111011690	exon	assembly	-	gene_id "ENSG00000198121.13"; ID "400160"; transcript_id "transcript53850.chr9.nnic"; exon "2"; exon_id "chr9.15471"; pos "mid"	0	71.7052	0	103.526
chr9	111011256	111011741	-	repeat_id "L3,chr9,111011256,111011741";repeat_class "LINE";repeat_family "CR1";	chr9	111011548	111011690	exon	assembly	-	gene_id "ENSG00000198121.13"; ID "400174"; transcript_id "transcript54016.chr9.nnic"; exon "2"; exon_id "chr9.15471"; pos "mid"	0	71.7052	0	103.526
chr9	112472081	112472435	+	repeat_id "LTR54B,chr9,112472081,112472435";repeat_class "LTR";repeat_family "ERV1";	chr9	112472338	112472405	exon	assembly	+	gene_id "ENSG00000119471.14"; ID "400951"; transcript_id "transcript55912.chr9.nnic"; exon "12"; exon_id "chr9.15885"; pos "last"	36.8816	0	0	0
chr9	116841404	116841538	-	repeat_id "AluJb,chr9,116841404,116841538";repeat_class "SINE";repeat_family "Alu";	chr9	116841429	116841517	exon	assembly	+	gene_id "novel_gene_chr9_59734"; ID "402343"; transcript_id "transcript59733.chr9.nnic"; exon "2"; exon_id "chr9.17058"; pos "mid"	0	0	0	0
chr9	116841404	116841538	-	repeat_id "AluJb,chr9,116841404,116841538";repeat_class "SINE";repeat_family "Alu";	chr9	116841429	116841517	exon	assembly	+	gene_id "novel_gene_chr9_59749"; ID "402349"; transcript_id "transcript59748.chr9.nnic"; exon "2"; exon_id "chr9.17058"; pos "mid"	0	0	0	0
chr9	122209611	122209732	+	repeat_id "LFSINE_Vert,chr9,122209611,122209732";repeat_class "SINE";repeat_family "tRNA";	chr9	122209614	122209717	exon	assembly	-	gene_id "ENSG00000106852.15"; ID "403422"; transcript_id "transcript63285.chr9.nic"; exon "3"; exon_id "chr9.17849"; pos "mid"	3.0735	0	0	0
chr9	122854712	122854821	+	repeat_id "MIRb,chr9,122854712,122854821";repeat_class "SINE";repeat_family "MIR";	chr9	122854714	122854744	exon	assembly	-	gene_id "ENSG00000136940.13"; ID "403632"; transcript_id "transcript63725.chr9.nnic"; exon "1"; exon_id "chr9.18017"; pos "first"	0	0	0	0
chr9	123236852	123237154	+	repeat_id "AluSz,chr9,123236852,123237154";repeat_class "SINE";repeat_family "Alu";	chr9	123236830	123236966	exon	assembly	-	gene_id "ENSG00000165209.18"; ID "404101"; transcript_id "ENST00000348403.9"; exon "2"; exon_id "chr9.18252"; pos "mid"	0	0	81.7785	0
chr9	123651993	123652144	-	repeat_id "OldhAT1,chr9,123651993,123652144";repeat_class "DNA";repeat_family "hAT-Ac";	chr9	123652013	123652123	exon	assembly	-	gene_id "ENSG00000119522.16"; ID "404255"; transcript_id "ENST00000373620.7"; exon "9"; exon_id "chr9.18293"; pos "mid"	18.9533	0	0	0
chr9	125064868	125066239	+	repeat_id "L1MEh,chr9,125064868,125066239";repeat_class "LINE";repeat_family "L1";	chr9	125065990	125066058	exon	assembly	-	gene_id "ENSG00000173611.17"; ID "404739"; transcript_id "transcript66720.chr9.nnic"; exon "3"; exon_id "chr9.18703"; pos "mid"	0	0	0	0
chr9	127522530	127523072	+	repeat_id "L2a,chr9,127522530,127523072";repeat_class "LINE";repeat_family "L2";	chr9	127522691	127522844	exon	assembly	-	gene_id "ENSG00000136830.11"; ID "405921"; transcript_id "transcript69480.chr9.nnic"; exon "1"; exon_id "chr9.19453"; pos "first"	0	0	0	0
chr9	127897919	127898088	+	repeat_id "MIR,chr9,127897919,127898088";repeat_class "SINE";repeat_family "MIR";	chr9	127897956	127898010	exon	assembly	-	gene_id "ENSG00000160408.14"; ID "406491"; transcript_id "ENST00000373146.5"; exon "2"; exon_id "chr9.19877"; pos "mid"	0	17.7992	0	0
chr9	127897919	127898088	+	repeat_id "MIR,chr9,127897919,127898088";repeat_class "SINE";repeat_family "MIR";	chr9	127897956	127898010	exon	assembly	-	gene_id "ENSG00000160408.14"; ID "406506"; transcript_id "ENST00000485320.5"; exon "2"; exon_id "chr9.19877"; pos "mid"	0	17.7992	0	0
chr9	128187634	128188001	+	repeat_id "L1M5,chr9,128187634,128188001";repeat_class "LINE";repeat_family "L1";	chr9	128187863	128187934	exon	assembly	-	gene_id "ENSG00000148337.20"; ID "406828"; transcript_id "transcript71883.chr9.nic"; exon "4"; exon_id "chr9.20181"; pos "mid"	13.3185	0	0	16.7613
chr9	128187634	128188001	+	repeat_id "L1M5,chr9,128187634,128188001";repeat_class "LINE";repeat_family "L1";	chr9	128187863	128187934	exon	assembly	-	gene_id "ENSG00000148337.20"; ID "406847"; transcript_id "ENST00000372938.9"; exon "4"; exon_id "chr9.20181"; pos "mid"	13.3185	0	0	16.7613
chr9	128187634	128188001	+	repeat_id "L1M5,chr9,128187634,128188001";repeat_class "LINE";repeat_family "L1";	chr9	128187863	128187934	exon	assembly	-	gene_id "ENSG00000148337.20"; ID "406883"; transcript_id "transcript71932.chr9.nic"; exon "4"; exon_id "chr9.20181"; pos "mid"	13.3185	0	0	16.7613
chr9	128187634	128188001	+	repeat_id "L1M5,chr9,128187634,128188001";repeat_class "LINE";repeat_family "L1";	chr9	128187863	128187934	exon	assembly	-	gene_id "ENSG00000148337.20"; ID "406918"; transcript_id "transcript72029.chr9.nic"; exon "4"; exon_id "chr9.20181"; pos "mid"	13.3185	0	0	16.7613
chr9	128378028	128378106	+	repeat_id "MamRTE1,chr9,128378028,128378106";repeat_class "LINE";repeat_family "RTE-BovB";	chr9	128378036	128378106	exon	assembly	+	gene_id "ENSG00000167118.10"; ID "407226"; transcript_id "ENST00000372853.8"; exon "2"; exon_id "chr9.20494"; pos "mid"	71.7146	63.5684	0	16.7613
chr9	128378028	128378106	+	repeat_id "MamRTE1,chr9,128378028,128378106";repeat_class "LINE";repeat_family "RTE-BovB";	chr9	128378036	128378106	exon	assembly	+	gene_id "ENSG00000167118.10"; ID "407237"; transcript_id "ENST00000372850.5"; exon "2"; exon_id "chr9.20494"; pos "mid"	71.7146	63.5684	0	16.7613
chr9	128732713	128733133	+	repeat_id "L5,chr9,128732713,128733133";repeat_class "LINE";repeat_family "RTE-X";	chr9	128732842	128733194	exon	assembly	+	gene_id "ENSG00000223478.1"; ID "407890"; transcript_id "ENST00000443631.1"; exon "2"; exon_id "chr9.20930"; pos "last"	0	0	0	0
chr9	128788328	128788428	+	repeat_id "OldhAT1,chr9,128788328,128788428";repeat_class "DNA";repeat_family "hAT-Ac";	chr9	128788334	128788407	exon	assembly	+	gene_id "ENSG00000107021.15"; ID "407942"; transcript_id "transcript75598.chr9.nnic"; exon "2"; exon_id "chr9.20971"; pos "mid"	34.8329	110.863	0	0
chr9	128788328	128788428	+	repeat_id "OldhAT1,chr9,128788328,128788428";repeat_class "DNA";repeat_family "hAT-Ac";	chr9	128788334	128788407	exon	assembly	+	gene_id "ENSG00000107021.15"; ID "407950"; transcript_id "ENST00000372648.9"; exon "2"; exon_id "chr9.20971"; pos "mid"	34.8329	110.863	0	0
chr9	129051288	129051574	-	repeat_id "AluSc,chr9,129051288,129051574";repeat_class "SINE";repeat_family "Alu";	chr9	129051300	129051420	exon	assembly	+	gene_id "ENSG00000148343.18"; ID "408417"; transcript_id "ENST00000439290.5"; exon "7"; exon_id "chr9.21283"; pos "mid"	0	0	0	0
chr9	129338482	129338896	-	repeat_id "MER41C,chr9,129338482,129338896";repeat_class "LTR";repeat_family "ERV1";	chr9	129338792	129338917	exon	assembly	+	gene_id "ENSG00000233901.5"; ID "408646"; transcript_id "transcript76636.chr9.nic"; exon "3"; exon_id "chr9.21461"; pos "mid"	38.9307	0	0	0
chr9	129338482	129338896	-	repeat_id "MER41C,chr9,129338482,129338896";repeat_class "LTR";repeat_family "ERV1";	chr9	129338792	129338917	exon	assembly	+	gene_id "ENSG00000233901.5"; ID "408652"; transcript_id "transcript76641.chr9.nnic"; exon "3"; exon_id "chr9.21461"; pos "mid"	38.9307	0	0	0
chr9	129338482	129338896	-	repeat_id "MER41C,chr9,129338482,129338896";repeat_class "LTR";repeat_family "ERV1";	chr9	129338792	129338917	exon	assembly	+	gene_id "ENSG00000233901.5"; ID "408658"; transcript_id "transcript76648.chr9.nnic"; exon "3"; exon_id "chr9.21461"; pos "mid"	38.9307	0	0	0
chr9	129338482	129338896	-	repeat_id "MER41C,chr9,129338482,129338896";repeat_class "LTR";repeat_family "ERV1";	chr9	129338792	129338917	exon	assembly	+	gene_id "ENSG00000233901.5"; ID "408663"; transcript_id "transcript76688.chr9.nnic"; exon "2"; exon_id "chr9.21461"; pos "mid"	38.9307	0	0	0
chr9	129338482	129338896	-	repeat_id "MER41C,chr9,129338482,129338896";repeat_class "LTR";repeat_family "ERV1";	chr9	129338792	129338917	exon	assembly	+	gene_id "ENSG00000233901.5"; ID "408668"; transcript_id "transcript76691.chr9.nnic"; exon "2"; exon_id "chr9.21461"; pos "mid"	38.9307	0	0	0
chr9	129749367	129749670	+	repeat_id "AluJb,chr9,129749367,129749670";repeat_class "SINE";repeat_family "Alu";	chr9	129749521	129749642	exon	assembly	-	gene_id "ENSG00000148344.10"; ID "408835"; transcript_id "ENST00000481476.1"; exon "2"; exon_id "chr9.21623"; pos "mid"	0	0	0	0
chr9	137576276	137576455	-	repeat_id "Tigger3c,chr9,137576276,137576455";repeat_class "DNA";repeat_family "TcMar-Tigger";	chr9	137576309	137576402	exon	assembly	-	gene_id "ENSG00000148399.12"; ID "413135"; transcript_id "transcript89343.chr9.nic"; exon "2"; exon_id "chr9.25848"; pos "mid"	0	0	0	0
chrX	24161683	24161999	-	repeat_id "AluSz,chrX,24161683,24161999";repeat_class "SINE";repeat_family "Alu";	chrX	24161715	24161842	exon	assembly	+	gene_id "ENSG00000005889.15"; ID "798337"; transcript_id "ENST00000379177.5"; exon "4"; exon_id "chrX.3107"; pos "mid"	0	53.906	0	0
chrX	38153824	38154027	+	repeat_id "LTR103_Mam,chrX,38153824,38154027";repeat_class "LTR";repeat_family "ERV1?";	chrX	38153948	38154032	exon	assembly	-	gene_id "ENSG00000101955.14"; ID "799175"; transcript_id "transcript11238.chrX.nic"; exon "10"; exon_id "chrX.3914"; pos "mid"	0	0	0	0
chrX	46470656	46471361	-	repeat_id "L1MEd,chrX,46470656,46471361";repeat_class "LINE";repeat_family "L1";	chrX	46471142	46471185	exon	assembly	+	gene_id "ENSG00000147121.15"; ID "800675"; transcript_id "ENST00000377919.6"; exon "6"; exon_id "chrX.5049"; pos "mid"	0	69.1625	0	0
chrX	46471962	46472575	-	repeat_id "L1MEd,chrX,46471962,46472575";repeat_class "LINE";repeat_family "L1";	chrX	46472025	46472526	exon	assembly	+	gene_id "ENSG00000147121.15"; ID "800676"; transcript_id "ENST00000377919.6"; exon "7"; exon_id "chrX.5050"; pos "last"	0	0	0	0
chrX	46563076	46563373	-	repeat_id "AluJb,chrX,46563076,46563373";repeat_class "SINE";repeat_family "Alu";	chrX	46563259	46563351	exon	assembly	+	gene_id "ENSG00000147119.3"; ID "800746"; transcript_id "transcript15027.chrX.nnic"; exon "2"; exon_id "chrX.5075"; pos "mid"	35.8571	0	0	0
chrX	47179097	47179190	-	repeat_id "L3b,chrX,47179097,47179190";repeat_class "LINE";repeat_family "CR1";	chrX	47179103	47179163	exon	assembly	+	gene_id "ENSG00000182872.15"; ID "801010"; transcript_id "ENST00000377604.7"; exon "8"; exon_id "chrX.5262"; pos "mid"	15.8797	37.6323	38.6789	8.87364
chrX	47179097	47179190	-	repeat_id "L3b,chrX,47179097,47179190";repeat_class "LINE";repeat_family "CR1";	chrX	47179103	47179163	exon	assembly	+	gene_id "ENSG00000182872.15"; ID "801038"; transcript_id "ENST00000345781.10"; exon "7"; exon_id "chrX.5262"; pos "mid"	15.8797	37.6323	38.6789	8.87364
chrX	47179097	47179190	-	repeat_id "L3b,chrX,47179097,47179190";repeat_class "LINE";repeat_family "CR1";	chrX	47179103	47179163	exon	assembly	+	gene_id "ENSG00000182872.15"; ID "801062"; transcript_id "ENST00000628161.2"; exon "7"; exon_id "chrX.5262"; pos "mid"	15.8797	37.6323	38.6789	8.87364
chrX	48895316	48895652	-	repeat_id "L2b,chrX,48895316,48895652";repeat_class "LINE";repeat_family "L2";	chrX	48895352	48895454	exon	assembly	-	gene_id "ENSG00000126768.12"; ID "802017"; transcript_id "ENST00000495490.6"; exon "3"; exon_id "chrX.6237"; pos "mid"	0	8.1368	0	0
chrX	48895316	48895652	-	repeat_id "L2b,chrX,48895316,48895652";repeat_class "LINE";repeat_family "L2";	chrX	48895352	48895501	exon	assembly	-	gene_id "ENSG00000126768.12"; ID "802009"; transcript_id "ENST00000465150.6"; exon "3"; exon_id "chrX.6231"; pos "mid"	0	8.1368	0	0
chrX	53099384	53100198	-	repeat_id "Tigger1,chrX,53099384,53100198";repeat_class "DNA";repeat_family "TcMar-Tigger";	chrX	53099472	53099608	exon	assembly	+	gene_id "ENSG00000232593.7"; ID "803018"; transcript_id "ENST00000603385.2"; exon "3"; exon_id "chrX.7510"; pos "mid"	33.8085	63.5683	0	0
chrX	54565035	54565516	-	repeat_id "L1ME1,chrX,54565035,54565516";repeat_class "LINE";repeat_family "L1";	chrX	54564999	54565276	exon	assembly	+	gene_id "ENSG00000130119.15"; ID "803738"; transcript_id "transcript25080.chrX.nnic"; exon "5"; exon_id "chrX.8119"; pos "last"	0	0	0	0
chrX	54815878	54816014	-	repeat_id "MER117,chrX,54815878,54816014";repeat_class "DNA";repeat_family "hAT-Charlie";	chrX	54815881	54816007	exon	assembly	+	gene_id "ENSG00000102316.16"; ID "803895"; transcript_id "ENST00000375068.5"; exon "13"; exon_id "chrX.8196"; pos "last"	0	0	51.9402	0
chrX	54815878	54816014	-	repeat_id "MER117,chrX,54815878,54816014";repeat_class "DNA";repeat_family "hAT-Charlie";	chrX	54815881	54816007	exon	assembly	+	gene_id "ENSG00000102316.16"; ID "803909"; transcript_id "ENST00000375058.5"; exon "13"; exon_id "chrX.8196"; pos "last"	0	0	51.9402	0
chrX	54815878	54816014	-	repeat_id "MER117,chrX,54815878,54816014";repeat_class "DNA";repeat_family "hAT-Charlie";	chrX	54815881	54816012	exon	assembly	+	gene_id "ENSG00000102316.16"; ID "803837"; transcript_id "transcript25778.chrX.nic"; exon "13"; exon_id "chrX.8184"; pos "last"	0	0	51.9402	0
chrX	54815878	54816014	-	repeat_id "MER117,chrX,54815878,54816014";repeat_class "DNA";repeat_family "hAT-Charlie";	chrX	54815881	54816012	exon	assembly	+	gene_id "ENSG00000102316.16"; ID "803850"; transcript_id "transcript25810.chrX.nic"; exon "12"; exon_id "chrX.8184"; pos "last"	0	0	51.9402	0
chrX	56805825	56812215	-	repeat_id "L1PA7,chrX,56805825,56812215";repeat_class "LINE";repeat_family "L1";	chrX	56811020	56811179	exon	assembly	+	gene_id "ENSG00000204272.12"; ID "804244"; transcript_id "ENST00000637096.1"; exon "3"; exon_id "chrX.8510"; pos "mid"	0	0	0	0
chrX	63428376	63433922	-	repeat_id "LTR46-int,chrX,63428376,63433922";repeat_class "LTR";repeat_family "ERV1";	chrX	63432364	63432491	exon	assembly	-	gene_id "ENSG00000235437.7"; ID "804453"; transcript_id "transcript27070.chrX.nnic"; exon "3"; exon_id "chrX.8716"; pos "mid"	34.833	58.4832	0	0
chrX	63428376	63433922	-	repeat_id "LTR46-int,chrX,63428376,63433922";repeat_class "LTR";repeat_family "ERV1";	chrX	63432364	63432491	exon	assembly	-	gene_id "ENSG00000235437.7"; ID "804457"; transcript_id "transcript27111.chrX.nnic"; exon "2"; exon_id "chrX.8716"; pos "mid"	34.833	58.4832	0	0
chrX	65524526	65524624	+	repeat_id "MIR3,chrX,65524526,65524624";repeat_class "SINE";repeat_family "MIR";	chrX	65524564	65524614	exon	assembly	-	gene_id "ENSG00000001497.16"; ID "804835"; transcript_id "ENST00000374811.7"; exon "9"; exon_id "chrX.8990"; pos "mid"	0.51225	0	0	35.4946
chrX	65524526	65524624	+	repeat_id "MIR3,chrX,65524526,65524624";repeat_class "SINE";repeat_family "MIR";	chrX	65524564	65524614	exon	assembly	-	gene_id "ENSG00000001497.16"; ID "804876"; transcript_id "ENST00000484069.1"; exon "8"; exon_id "chrX.8990"; pos "mid"	0.51225	0	0	35.4946
chrX	71249217	71249355	-	repeat_id "L1ME3Cz,chrX,71249217,71249355";repeat_class "LINE";repeat_family "L1";	chrX	71249204	71249375	exon	assembly	-	gene_id "ENSG00000147130.14"; ID "805738"; transcript_id "transcript30716.chrX.nnic"; exon "2"; exon_id "chrX.9885"; pos "last"	0	0	0	0
chrX	71465715	71465998	+	repeat_id "L1ME3G,chrX,71465715,71465998";repeat_class "LINE";repeat_family "L1";	chrX	71465907	71465998	exon	assembly	+	gene_id "ENSG00000147133.15"; ID "805913"; transcript_id "transcript30791.chrX.nnic"; exon "8"; exon_id "chrX.10031"; pos "last"	0	0	0	0
chrX	72237796	72237963	+	repeat_id "AluJb,chrX,72237796,72237963";repeat_class "SINE";repeat_family "Alu";	chrX	72237831	72237948	exon	assembly	-	gene_id "ENSG00000186871.6"; ID "806214"; transcript_id "ENST00000373657.2"; exon "2"; exon_id "chrX.10330"; pos "mid"	0	0	0	0
chrX	72305786	72305899	-	repeat_id "MIRc,chrX,72305786,72305899";repeat_class "SINE";repeat_family "MIR";	chrX	72305825	72305914	exon	assembly	-	gene_id "ENSG00000125931.10"; ID "806248"; transcript_id "ENST00000445983.5"; exon "1"; exon_id "chrX.10350"; pos "first"	0	0	0	0
chrX	73836438	73837723	+	repeat_id "L1MC3,chrX,73836438,73837723";repeat_class "LINE";repeat_family "L1";	chrX	73837440	73837503	exon	assembly	-	gene_id "ENSG00000229807.10"; ID "806459"; transcript_id "ENST00000429829.5"; exon "2"; exon_id "chrX.10589"; pos "mid"	0	55.4315	0	0
chrX	73994827	73995038	-	repeat_id "AluSp,chrX,73994827,73995038";repeat_class "SINE";repeat_family "Alu";	chrX	73994840	73994961	exon	assembly	+	gene_id "ENSG00000225470.7"; ID "806516"; transcript_id "ENST00000602920.5"; exon "3"; exon_id "chrX.10643"; pos "mid"	0	0	0	0
chrX	74003586	74004750	+	repeat_id "L1MA7,chrX,74003586,74004750";repeat_class "LINE";repeat_family "L1";	chrX	74004270	74004551	exon	assembly	+	gene_id "ENSG00000225470.7"; ID "806517"; transcript_id "ENST00000602920.5"; exon "4"; exon_id "chrX.10644"; pos "last"	18.441	0	36.4686	0
chrX	74003586	74004750	+	repeat_id "L1MA7,chrX,74003586,74004750";repeat_class "LINE";repeat_family "L1";	chrX	74004270	74004551	exon	assembly	+	gene_id "ENSG00000225470.7"; ID "806521"; transcript_id "ENST00000602985.5"; exon "3"; exon_id "chrX.10644"; pos "last"	18.441	0	36.4686	0
chrX	77897116	77897384	+	repeat_id "L1ME1,chrX,77897116,77897384";repeat_class "LINE";repeat_family "L1";	chrX	77897241	77897290	exon	assembly	+	gene_id "ENSG00000131174.4"; ID "807277"; transcript_id "transcript35434.chrX.nnic"; exon "1"; exon_id "chrX.11147"; pos "first"	0	0	0	0
chrX	81195033	81195548	-	repeat_id "MLT2A2,chrX,81195033,81195548";repeat_class "LTR";repeat_family "ERVL";	chrX	81195118	81195297	exon	assembly	-	gene_id "ENSG00000198157.10"; ID "807581"; transcript_id "transcript36351.chrX.nic"; exon "2"; exon_id "chrX.11425"; pos "mid"	0	0	0	0
chrX	81195033	81195548	-	repeat_id "MLT2A2,chrX,81195033,81195548";repeat_class "LTR";repeat_family "ERVL";	chrX	81195118	81195297	exon	assembly	-	gene_id "ENSG00000198157.10"; ID "807590"; transcript_id "ENST00000451455.1"; exon "2"; exon_id "chrX.11425"; pos "mid"	0	0	0	0
chrX	81195033	81195548	-	repeat_id "MLT2A2,chrX,81195033,81195548";repeat_class "LTR";repeat_family "ERVL";	chrX	81195118	81195297	exon	assembly	-	gene_id "ENSG00000198157.10"; ID "807624"; transcript_id "ENST00000436386.5"; exon "3"; exon_id "chrX.11425"; pos "mid"	0	0	0	0
chrX	100703071	100703372	+	repeat_id "AluJb,chrX,100703071,100703372";repeat_class "SINE";repeat_family "Alu";	chrX	100703093	100703185	exon	assembly	-	gene_id "ENSG00000102362.15"; ID "808508"; transcript_id "transcript38058.chrX.nic"; exon "4"; exon_id "chrX.12113"; pos "mid"	18.9533	0	0	0
chrX	100703071	100703372	+	repeat_id "AluJb,chrX,100703071,100703372";repeat_class "SINE";repeat_family "Alu";	chrX	100703093	100703185	exon	assembly	-	gene_id "ENSG00000102362.15"; ID "808528"; transcript_id "transcript38061.chrX.nnic"; exon "3"; exon_id "chrX.12113"; pos "mid"	18.9533	0	0	0
chrX	100703071	100703372	+	repeat_id "AluJb,chrX,100703071,100703372";repeat_class "SINE";repeat_family "Alu";	chrX	100703093	100703185	exon	assembly	-	gene_id "ENSG00000102362.15"; ID "808547"; transcript_id "transcript38070.chrX.nnic"; exon "2"; exon_id "chrX.12113"; pos "mid"	18.9533	0	0	0
chrX	100703071	100703372	+	repeat_id "AluJb,chrX,100703071,100703372";repeat_class "SINE";repeat_family "Alu";	chrX	100703093	100703185	exon	assembly	-	gene_id "ENSG00000102362.15"; ID "808596"; transcript_id "ENST00000372989.5"; exon "3"; exon_id "chrX.12113"; pos "mid"	18.9533	0	0	0
chrX	103684644	103684884	-	repeat_id "MIR,chrX,103684644,103684884";repeat_class "SINE";repeat_family "MIR";	chrX	103684681	103684729	exon	assembly	-	gene_id "ENSG00000123562.16"; ID "809624"; transcript_id "transcript42253.chrX.nic"; exon "3"; exon_id "chrX.13185"; pos "mid"	194.141	391.072	125.983	269.168
chrX	103684644	103684884	-	repeat_id "MIR,chrX,103684644,103684884";repeat_class "SINE";repeat_family "MIR";	chrX	103684681	103684729	exon	assembly	-	gene_id "ENSG00000123562.16"; ID "809652"; transcript_id "ENST00000442614.5"; exon "3"; exon_id "chrX.13185"; pos "mid"	194.141	391.072	125.983	269.168
chrX	103964196	103964490	+	repeat_id "AluSz6,chrX,103964196,103964490";repeat_class "SINE";repeat_family "Alu";	chrX	103964228	103964294	exon	assembly	+	gene_id "ENSG00000158427.14"; ID "809730"; transcript_id "ENST00000569577.1"; exon "2"; exon_id "chrX.13272"; pos "mid"	0	0	0	0
chrX	104074373	104074667	-	repeat_id "AluSz6,chrX,104074373,104074667";repeat_class "SINE";repeat_family "Alu";	chrX	104074569	104074638	exon	assembly	-	gene_id "ENSG00000269226.7"; ID "809738"; transcript_id "transcript42605.chrX.nnic"; exon "1"; exon_id "chrX.13338"; pos "first"	0	0	0	0
chrX	104130881	104131421	-	repeat_id "MLT1H1,chrX,104130881,104131421";repeat_class "LTR";repeat_family "ERVL-MaLR";	chrX	104130930	104131223	exon	assembly	-	gene_id "ENSG00000269743.2"; ID "809753"; transcript_id "transcript42712.chrX.nnic"; exon "3"; exon_id "chrX.13360"; pos "last"	34.8327	0	0	0
chrX	104144503	104144592	-	repeat_id "L1P3,chrX,104144503,104144592";repeat_class "LINE";repeat_family "L1";	chrX	104144506	104144591	exon	assembly	-	gene_id "ENSG00000269743.2"; ID "809752"; transcript_id "transcript42712.chrX.nnic"; exon "2"; exon_id "chrX.13362"; pos "mid"	0	0	7.73577	0
chrX	119799035	119799314	-	repeat_id "AluSz,chrX,119799035,119799314";repeat_class "SINE";repeat_family "Alu";	chrX	119799203	119799320	exon	assembly	+	gene_id "novel_gene_chrX_48188"; ID "812185"; transcript_id "transcript48187.chrX.nnic"; exon "3"; exon_id "chrX.15284"; pos "mid"	0	0	0	0
chrX	120623977	120624270	+	repeat_id "AluSp,chrX,120623977,120624270";repeat_class "SINE";repeat_family "Alu";	chrX	120624133	120624230	exon	assembly	-	gene_id "ENSG00000171155.7"; ID "812456"; transcript_id "transcript49552.chrX.nnic"; exon "2"; exon_id "chrX.15517"; pos "mid"	0	0	0	0
chrX	129492704	129493386	+	repeat_id "L1ME4a,chrX,129492704,129493386";repeat_class "LINE";repeat_family "L1";	chrX	129493040	129493075	exon	assembly	-	gene_id "ENSG00000102038.15"; ID "813029"; transcript_id "ENST00000371122.8"; exon "13"; exon_id "chrX.15973"; pos "mid"	4.61025	0	0	0
chrX	136925271	136925468	-	repeat_id "LTR41,chrX,136925271,136925468";repeat_class "LTR";repeat_family "ERVL";	chrX	136925247	136925379	exon	assembly	+	gene_id "ENSG00000234062.7"; ID "814870"; transcript_id "ENST00000431464.5"; exon "2"; exon_id "chrX.17539"; pos "mid"	0	0	0	0
chrX	150828284	150828536	-	repeat_id "MIR,chrX,150828284,150828536";repeat_class "SINE";repeat_family "MIR";	chrX	150828306	150828368	exon	assembly	-	gene_id "ENSG00000102181.20"; ID "815908"; transcript_id "transcript56735.chrX.nnic"; exon "3"; exon_id "chrX.18546"; pos "mid"	66.5922	0	0	0
chrX	154424336	154424713	-	repeat_id "MLT1C,chrX,154424336,154424713";repeat_class "LTR";repeat_family "ERVL-MaLR";	chrX	154424380	154424625	exon	assembly	-	gene_id "ENSG00000197180.2"; ID "816828"; transcript_id "ENST00000360656.2"; exon "2"; exon_id "chrX.20143"; pos "last"	0	0	0	0
chrX	154424336	154424713	-	repeat_id "MLT1C,chrX,154424336,154424713";repeat_class "LTR";repeat_family "ERVL-MaLR";	chrX	154424384	154424625	exon	assembly	-	gene_id "ENSG00000197180.2"; ID "816821"; transcript_id "transcript60581.chrX.nnic"; exon "3"; exon_id "chrX.20140"; pos "last"	0	0	0	0
chrX	154424336	154424713	-	repeat_id "MLT1C,chrX,154424336,154424713";repeat_class "LTR";repeat_family "ERVL-MaLR";	chrX	154424384	154424625	exon	assembly	-	gene_id "ENSG00000197180.2"; ID "816825"; transcript_id "transcript60582.chrX.nnic"; exon "3"; exon_id "chrX.20140"; pos "last"	0	0	0	0
chrX	155073001	155073435	-	repeat_id "Tigger20a,chrX,155073001,155073435";repeat_class "DNA";repeat_family "TcMar-Tigger";	chrX	155073377	155073431	exon	assembly	+	gene_id "ENSG00000185515.14"; ID "817402"; transcript_id "ENST00000369462.5"; exon "3"; exon_id "chrX.20743"; pos "mid"	25.6125	0	0	14.7894
chrX	155073001	155073435	-	repeat_id "Tigger20a,chrX,155073001,155073435";repeat_class "DNA";repeat_family "TcMar-Tigger";	chrX	155073377	155073431	exon	assembly	+	gene_id "ENSG00000185515.14"; ID "817448"; transcript_id "ENST00000369459.6"; exon "3"; exon_id "chrX.20743"; pos "mid"	25.6125	0	0	14.7894
chrX	155099120	155099647	-	repeat_id "MLT1J,chrX,155099120,155099647";repeat_class "LTR";repeat_family "ERVL-MaLR";	chrX	155099315	155099389	exon	assembly	+	gene_id "ENSG00000185515.14"; ID "817407"; transcript_id "ENST00000369462.5"; exon "8"; exon_id "chrX.20753"; pos "mid"	0	0	0	42.3963