Information for 14-CGGAAGCGTT (Motif 12)


Reverse Opposite:

p-value:1e-206
log p-value:-4.745e+02
Information Content per bp:1.461
Number of Target Sequences with motif7414.0
Percentage of Target Sequences with motif12.71%
Number of Background Sequences with motif5093.5
Percentage of Background Sequences with motif8.88%
Average Position of motif in Targets839.3 +/- 890.9bp
Average Position of motif in Background373.1 +/- 240.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0076.2_ELK4/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGCGTT
NCCGGAAGTGG-

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGCGTT
RCCGGAAGTD--

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGAAGCGTT
-NGAAGC---

MA0062.2_GABPA/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGAAGCGTT
CCGGAAGTGGC

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGCGTT
DCCGGAARYN--

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGCGTT
ANCCGGAAGT---

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAGCGTT
RCCGGAARYN--

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGAAGCGTT
ACCGGAAG----

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGCGTT
NACCGGAAGT---

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGAAGCGTT
AACCGGAAGT---