Information for 15-CGCCGCTAAG (Motif 13)


Reverse Opposite:

p-value:1e-176
log p-value:-4.054e+02
Information Content per bp:1.924
Number of Target Sequences with motif8355.0
Percentage of Target Sequences with motif14.32%
Number of Background Sequences with motif6045.7
Percentage of Background Sequences with motif10.55%
Average Position of motif in Targets850.0 +/- 893.7bp
Average Position of motif in Background373.9 +/- 241.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCTAAG---
CCTTCGGCGCCAAAAGG

MA0048.1_NHLH1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGCTAAG-
NCGCAGCTGCGN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCTAAG---
NCCGTTGCTANGNGN

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCTAAG---
AGCTCGGCGCCAAAAGC

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCTAAG---
TCCGTCGCTTAAAAG

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCTAAG---
NNCGTTGCTATGGNN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCCGCTAAG-
ATCCCCGCCCCTAAAA

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCTAAG
AGCGCGCC------

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CGCCGCTAAG-------
NTNNNNNGTTGCTANGGNNCANA

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGCCGCTAAG-
TCACCCCGCCCCAAATT