Information for 17-STCTCCGG (Motif 16)


Reverse Opposite:

p-value:1e-155
log p-value:-3.590e+02
Information Content per bp:1.580
Number of Target Sequences with motif11568.0
Percentage of Target Sequences with motif19.82%
Number of Background Sequences with motif8990.8
Percentage of Background Sequences with motif15.68%
Average Position of motif in Targets841.4 +/- 896.8bp
Average Position of motif in Background377.0 +/- 238.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-STCTCCGG
CCTCACCTG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:STCTCCGG--
NNCACCTGNN

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:STCTCCGG
-GCTCCG-

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:STCTCCGG---
CACAGCTGCAG

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---STCTCCGG----
NTNGCCTCAGGCNNN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:STCTCCGG---
-HCAGCTGDTN

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:STCTCCGG--
--CAGCTGNT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---STCTCCGG----
ATTGCCTCAGGCAAT

MA0117.1_Mafb/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--STCTCCGG
NCGTCAGC--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:STCTCCGG-----
---RCCGGAARYN