Information for 21-AATCGCCGGC (Motif 18)


Reverse Opposite:

p-value:1e-149
log p-value:-3.451e+02
Information Content per bp:1.647
Number of Target Sequences with motif11231.0
Percentage of Target Sequences with motif19.25%
Number of Background Sequences with motif8733.7
Percentage of Background Sequences with motif15.23%
Average Position of motif in Targets838.1 +/- 995.5bp
Average Position of motif in Background373.0 +/- 231.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATCGCCGGC
CAAATCACTG--

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AATCGCCGGC
GTTAATGGCC---

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATCGCCGGC
AAATCACTGC-

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATCGCCGGC
YAACBGCC---

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATCGCCGGC
AAATCACAGCA

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AATCGCCGGC-
ATAGTTAATCCCCCNNA

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AATCGCCGGC-----
CAATCACTGGCAGAAT

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AATCGCCGGC-
ATAGTTAATCCCCCTCA

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AATCGCCGGC
YTAATCCY----

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------AATCGCCGGC
ANNCATTAATTGCTNGN