Information for 19-GCTTGTTTACTC (Motif 23)


Reverse Opposite:

p-value:1e-95
log p-value:-2.208e+02
Information Content per bp:1.985
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets380.3 +/- 452.2bp
Average Position of motif in Background423.9 +/- 231.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GCTTGTTTACTC-
-CNTGTTTACATA

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCTTGTTTACTC
-TNTGTTTACTT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCTTGTTTACTC
NYYTGTTTACHN

MA0031.1_FOXD1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GCTTGTTTACTC
--ATGTTTAC--

MA0480.1_Foxo1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCTTGTTTACTC
TCCTGTTTACA-

MA0148.3_FOXA1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCTTGTTTACTC--
TCCATGTTTACTTTG

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGTTTACTC---
NNNTTTGTTTACNTTNN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GCTTGTTTACTC-
---TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GCTTGTTTACTC-
---TGTTTACTTT

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGTTTACTC-
NNNNTTTGTTTACNNT