Information for 20-GGGGGAAAAAAA (Motif 24)


Reverse Opposite:

p-value:1e-95
log p-value:-2.206e+02
Information Content per bp:1.599
Number of Target Sequences with motif5785.0
Percentage of Target Sequences with motif9.91%
Number of Background Sequences with motif4321.1
Percentage of Background Sequences with motif7.54%
Average Position of motif in Targets802.8 +/- 1008.9bp
Average Position of motif in Background367.4 +/- 239.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGGAAAAAAA-
TACTGGAAAAAAAA

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGGGAAAAAAA---
AGCCGAAAAAAAAAT

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGGGAAAAAAA-----
GTTAAAAAAAAAAATTA

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGGGAAAAAAA
--TGGAAAA---

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGGGAAAAAAA
TGGGGA------

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGGAAAAAAA
AATGGAAAAT--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGGAAAAAAA
GGCGGGAARN---

MA0471.1_E2F6/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGGAAAAAAA
GGGCGGGAAGG---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGAAAAAAA
TGGCGGGAAAHB--

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGGAAAAAAA
ANTNCCGGGGGGAANTT--